EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025619 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 52723 bases
Position: chr2:169324304-169377026
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0058452	dsrm	PF00035.26	1.7e-26	1	2
MGP_SPRETEiJ_P0058452	dsrm	PF00035.26	1.7e-26	2	2
MGP_SPRETEiJ_P0058449	dsrm	PF00035.26	1.8e-26	1	2
MGP_SPRETEiJ_P0058449	dsrm	PF00035.26	1.8e-26	2	2
MGP_SPRETEiJ_P0058453	dsrm	PF00035.26	1.9e-26	1	2
MGP_SPRETEiJ_P0058453	dsrm	PF00035.26	1.9e-26	2	2
MGP_SPRETEiJ_P0058451	dsrm	PF00035.26	2.9e-23	1	2
MGP_SPRETEiJ_P0058451	dsrm	PF00035.26	2.9e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0058457	-	826	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0058456	-	874	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0058455	-	1513	-	MGP_SPRETEiJ_P0058455	436 (aa)	-	-
MGP_SPRETEiJ_T0058454	-	777	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0058453	-	2862	-	MGP_SPRETEiJ_P0058453	487 (aa)	-	-
MGP_SPRETEiJ_T0058452	-	2843	-	MGP_SPRETEiJ_P0058452	485 (aa)	-	-
MGP_SPRETEiJ_T0058451	-	2979	-	MGP_SPRETEiJ_P0058451	495 (aa)	-	-
MGP_SPRETEiJ_T0058450	-	3571	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0058449	-	3595	-	MGP_SPRETEiJ_P0058449	489 (aa)	-	-
MGP_SPRETEiJ_T0058459	-	341	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0058458	-	786	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025619	Stau1	86	48.055	MGP_SPRETEiJ_G0014772	Stau2	84	48.046
MGP_SPRETEiJ_G0025619	Stau1	52	31.395	MGP_SPRETEiJ_G0024609	Prkra	53	31.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025619	Stau1	100	91.170	ENSG00000124214	STAU1	99	91.170	Homo_sapiens
MGP_SPRETEiJ_G0025619	Stau1	100	70.265	ENSAPOG00000017260	stau1	71	70.265	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025619	Stau1	100	89.485	ENSAMEG00000013681	STAU1	69	89.669	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025619	Stau1	100	71.605	ENSACIG00000015918	stau1	71	72.279	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025619	Stau1	100	71.283	ENSAOCG00000012224	stau1	71	71.283	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025619	Stau1	100	71.487	ENSAPEG00000012308	stau1	71	71.487	Amphiprion_percula
MGP_SPRETEiJ_G0025619	Stau1	100	71.487	ENSATEG00000024600	stau1	73	71.487	Anabas_testudineus
MGP_SPRETEiJ_G0025619	Stau1	100	82.892	ENSAPLG00000010527	STAU1	69	83.673	Anas_platyrhynchos
MGP_SPRETEiJ_G0025619	Stau1	100	82.485	ENSACAG00000015909	STAU1	70	83.130	Anolis_carolinensis
MGP_SPRETEiJ_G0025619	Stau1	100	90.707	ENSANAG00000032714	STAU1	99	85.481	Aotus_nancymaae
MGP_SPRETEiJ_G0025619	Stau1	100	71.138	ENSACLG00000012270	stau1	71	71.138	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025619	Stau1	100	69.753	ENSAMXG00000016812	stau1	84	69.309	Astyanax_mexicanus
MGP_SPRETEiJ_G0025619	Stau1	100	88.957	ENSBTAG00000000241	STAU1	85	88.957	Bos_taurus
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSCJAG00000016233	STAU1	85	91.002	Callithrix_jacchus
MGP_SPRETEiJ_G0025619	Stau1	100	89.980	ENSCAFG00000011347	STAU1	83	89.980	Canis_familiaris
MGP_SPRETEiJ_G0025619	Stau1	100	88.710	ENSCAFG00020017123	STAU1	82	88.710	Canis_lupus_dingo
MGP_SPRETEiJ_G0025619	Stau1	100	88.957	ENSCHIG00000001799	-	100	82.485	Capra_hircus
MGP_SPRETEiJ_G0025619	Stau1	100	88.753	ENSTSYG00000036179	-	85	88.753	Carlito_syrichta
MGP_SPRETEiJ_G0025619	Stau1	100	87.885	ENSCAPG00000017041	STAU1	99	87.885	Cavia_aperea
MGP_SPRETEiJ_G0025619	Stau1	100	86.869	ENSCPOG00000005566	STAU1	100	86.869	Cavia_porcellus
MGP_SPRETEiJ_G0025619	Stau1	100	90.505	ENSCCAG00000034339	STAU1	85	90.505	Cebus_capucinus
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSCATG00000028474	STAU1	99	90.707	Cercocebus_atys
MGP_SPRETEiJ_G0025619	Stau1	100	90.909	ENSCLAG00000006516	-	100	90.909	Chinchilla_lanigera
MGP_SPRETEiJ_G0025619	Stau1	100	73.116	ENSCLAG00000002784	-	98	73.608	Chinchilla_lanigera
MGP_SPRETEiJ_G0025619	Stau1	100	90.798	ENSCSAG00000014986	STAU1	99	90.798	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025619	Stau1	100	89.592	ENSCHOG00000001511	STAU1	85	89.592	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025619	Stau1	100	82.892	ENSCPBG00000026741	STAU1	71	83.537	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025619	Stau1	100	90.798	ENSCANG00000039220	STAU1	99	81.653	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025619	Stau1	100	96.364	ENSCGRG00001013453	Stau1	100	96.364	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025619	Stau1	100	96.364	ENSCGRG00000007216	Stau1	100	96.364	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025619	Stau1	100	65.567	ENSCSEG00000000792	stau1	68	66.327	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025619	Stau1	99	68.724	ENSCVAG00000005906	stau1	86	69.405	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025619	Stau1	100	70.325	ENSDARG00000044182	stau1	78	70.101	Danio_rerio
MGP_SPRETEiJ_G0025619	Stau1	100	90.000	ENSDNOG00000014933	STAU1	83	90.000	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025619	Stau1	100	87.117	ENSDORG00000030220	Stau1	100	87.117	Dipodomys_ordii
MGP_SPRETEiJ_G0025619	Stau1	85	88.704	ENSETEG00000018235	STAU1	72	88.704	Echinops_telfairi
MGP_SPRETEiJ_G0025619	Stau1	100	90.389	ENSEASG00005023343	STAU1	100	86.364	Equus_asinus_asinus
MGP_SPRETEiJ_G0025619	Stau1	100	90.184	ENSECAG00000012894	STAU1	85	90.184	Equus_caballus
MGP_SPRETEiJ_G0025619	Stau1	81	90.633	ENSEEUG00000014344	STAU1	68	90.769	Erinaceus_europaeus
MGP_SPRETEiJ_G0025619	Stau1	100	70.600	ENSELUG00000002529	stau1	77	70.600	Esox_lucius
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSFCAG00000001447	STAU1	99	84.049	Felis_catus
MGP_SPRETEiJ_G0025619	Stau1	99	82.645	ENSFALG00000012940	STAU1	70	82.645	Ficedula_albicollis
MGP_SPRETEiJ_G0025619	Stau1	99	68.852	ENSFDAG00000020837	-	98	68.852	Fukomys_damarensis
MGP_SPRETEiJ_G0025619	Stau1	100	89.899	ENSFDAG00000014119	-	100	89.899	Fukomys_damarensis
MGP_SPRETEiJ_G0025619	Stau1	100	70.468	ENSFHEG00000013517	stau1	85	70.408	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025619	Stau1	100	60.433	ENSGMOG00000016850	stau1	71	60.552	Gadus_morhua
MGP_SPRETEiJ_G0025619	Stau1	100	84.330	ENSGALG00000004736	STAU1	70	84.504	Gallus_gallus
MGP_SPRETEiJ_G0025619	Stau1	99	70.408	ENSGAFG00000010437	stau1	71	70.385	Gambusia_affinis
MGP_SPRETEiJ_G0025619	Stau1	99	70.672	ENSGACG00000001352	stau1	72	70.505	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025619	Stau1	100	84.124	ENSGAGG00000009825	STAU1	70	84.298	Gopherus_agassizii
MGP_SPRETEiJ_G0025619	Stau1	100	90.505	ENSGGOG00000025351	STAU1	100	91.507	Gorilla_gorilla
MGP_SPRETEiJ_G0025619	Stau1	100	71.341	ENSHBUG00000023668	stau1	71	71.341	Haplochromis_burtoni
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSHGLG00000008730	STAU1	100	91.002	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSHGLG00100000098	STAU1	100	91.002	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025619	Stau1	99	68.916	ENSHCOG00000018461	stau1	70	68.916	Hippocampus_comes
MGP_SPRETEiJ_G0025619	Stau1	95	69.762	ENSIPUG00000023725	stau1	70	69.762	Ictalurus_punctatus
MGP_SPRETEiJ_G0025619	Stau1	100	91.207	ENSSTOG00000003634	STAU1	100	91.207	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025619	Stau1	100	90.593	ENSJJAG00000020032	Stau1	100	90.593	Jaculus_jaculus
MGP_SPRETEiJ_G0025619	Stau1	99	68.595	ENSKMAG00000007135	stau1	71	69.121	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025619	Stau1	99	68.687	ENSLBEG00000020172	stau1	71	68.687	Labrus_bergylta
MGP_SPRETEiJ_G0025619	Stau1	99	78.029	ENSLACG00000016157	STAU1	70	76.660	Latimeria_chalumnae
MGP_SPRETEiJ_G0025619	Stau1	100	74.743	ENSLOCG00000003134	stau1	71	74.694	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025619	Stau1	100	88.548	ENSLAFG00000003238	STAU1	96	88.548	Loxodonta_africana
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSMFAG00000040931	STAU1	100	93.750	Macaca_fascicularis
MGP_SPRETEiJ_G0025619	Stau1	100	90.707	ENSMMUG00000002302	STAU1	100	93.750	Macaca_mulatta
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSMNEG00000033821	STAU1	99	90.707	Macaca_nemestrina
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSMLEG00000031383	STAU1	85	91.002	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025619	Stau1	100	71.487	ENSMAMG00000017586	stau1	74	71.487	Mastacembelus_armatus
MGP_SPRETEiJ_G0025619	Stau1	100	71.138	ENSMZEG00005015605	stau1	71	71.138	Maylandia_zebra
MGP_SPRETEiJ_G0025619	Stau1	100	83.096	ENSMGAG00000004719	STAU1	69	83.878	Meleagris_gallopavo
MGP_SPRETEiJ_G0025619	Stau1	100	95.758	ENSMAUG00000013846	Stau1	100	95.758	Mesocricetus_auratus
MGP_SPRETEiJ_G0025619	Stau1	100	89.495	ENSMICG00000001995	STAU1	85	89.495	Microcebus_murinus
MGP_SPRETEiJ_G0025619	Stau1	100	96.364	ENSMOCG00000018743	Stau1	100	96.364	Microtus_ochrogaster
MGP_SPRETEiJ_G0025619	Stau1	100	69.877	ENSMMOG00000015455	stau1	98	70.143	Mola_mola
MGP_SPRETEiJ_G0025619	Stau1	100	87.117	ENSMODG00000016276	STAU1	73	87.117	Monodelphis_domestica
MGP_SPRETEiJ_G0025619	Stau1	100	71.283	ENSMALG00000000045	stau1	71	71.283	Monopterus_albus
MGP_SPRETEiJ_G0025619	Stau1	100	98.788	MGP_CAROLIEiJ_G0024699	Stau1	100	98.788	Mus_caroli
MGP_SPRETEiJ_G0025619	Stau1	100	99.596	ENSMUSG00000039536	Stau1	100	99.596	Mus_musculus
MGP_SPRETEiJ_G0025619	Stau1	100	98.384	MGP_PahariEiJ_G0026141	Stau1	100	98.384	Mus_pahari
MGP_SPRETEiJ_G0025619	Stau1	100	90.515	ENSMPUG00000017581	STAU1	72	90.702	Mustela_putorius_furo
MGP_SPRETEiJ_G0025619	Stau1	100	89.162	ENSMLUG00000008407	STAU1	83	89.162	Myotis_lucifugus
MGP_SPRETEiJ_G0025619	Stau1	100	92.323	ENSNGAG00000007108	Stau1	100	92.323	Nannospalax_galili
MGP_SPRETEiJ_G0025619	Stau1	100	71.341	ENSNBRG00000017596	stau1	71	71.341	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025619	Stau1	100	90.389	ENSNLEG00000006955	STAU1	99	90.101	Nomascus_leucogenys
MGP_SPRETEiJ_G0025619	Stau1	94	87.446	ENSMEUG00000003263	STAU1	80	87.446	Notamacropus_eugenii
MGP_SPRETEiJ_G0025619	Stau1	100	88.571	ENSOPRG00000014569	STAU1	86	88.571	Ochotona_princeps
MGP_SPRETEiJ_G0025619	Stau1	100	91.170	ENSODEG00000006523	STAU1	99	91.170	Octodon_degus
MGP_SPRETEiJ_G0025619	Stau1	100	71.545	ENSONIG00000004152	stau1	68	71.690	Oreochromis_niloticus
MGP_SPRETEiJ_G0025619	Stau1	99	82.927	ENSOANG00000006394	STAU1	70	82.927	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025619	Stau1	100	89.162	ENSOCUG00000006214	STAU1	85	89.162	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025619	Stau1	99	69.309	ENSOMEG00000002388	stau1	71	69.309	Oryzias_melastigma
MGP_SPRETEiJ_G0025619	Stau1	100	90.798	ENSOGAG00000002127	STAU1	83	90.798	Otolemur_garnettii
MGP_SPRETEiJ_G0025619	Stau1	100	62.753	ENSOGAG00000028222	-	98	62.753	Otolemur_garnettii
MGP_SPRETEiJ_G0025619	Stau1	100	88.957	ENSOARG00000012204	STAU1	83	88.957	Ovis_aries
MGP_SPRETEiJ_G0025619	Stau1	100	90.505	ENSPPAG00000032023	STAU1	100	91.507	Pan_paniscus
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSPPRG00000003436	STAU1	99	91.002	Panthera_pardus
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSPTIG00000011768	STAU1	99	89.718	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025619	Stau1	100	90.505	ENSPTRG00000023130	STAU1	100	91.507	Pan_troglodytes
MGP_SPRETEiJ_G0025619	Stau1	100	90.798	ENSPANG00000020560	STAU1	99	85.451	Papio_anubis
MGP_SPRETEiJ_G0025619	Stau1	100	72.074	ENSPKIG00000024588	stau1	71	71.457	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025619	Stau1	100	83.505	ENSPSIG00000010731	STAU1	70	83.678	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025619	Stau1	100	70.732	ENSPMGG00000018553	stau1	98	68.238	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025619	Stau1	100	96.768	ENSPEMG00000022045	Stau1	100	96.768	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025619	Stau1	100	87.117	ENSPCIG00000023269	STAU1	99	82.209	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025619	Stau1	99	70.612	ENSPFOG00000017253	stau1	71	70.445	Poecilia_formosa
MGP_SPRETEiJ_G0025619	Stau1	71	63.057	ENSPLAG00000014829	stau1	75	67.442	Poecilia_latipinna
MGP_SPRETEiJ_G0025619	Stau1	94	69.481	ENSPMEG00000007495	stau1	67	69.481	Poecilia_mexicana
MGP_SPRETEiJ_G0025619	Stau1	99	70.000	ENSPREG00000003477	stau1	71	69.838	Poecilia_reticulata
MGP_SPRETEiJ_G0025619	Stau1	100	90.389	ENSPPYG00000011111	STAU1	85	90.389	Pongo_abelii
MGP_SPRETEiJ_G0025619	Stau1	94	80.482	ENSPCAG00000002459	STAU1	84	80.482	Procavia_capensis
MGP_SPRETEiJ_G0025619	Stau1	100	89.775	ENSPCOG00000027746	STAU1	99	89.697	Propithecus_coquereli
MGP_SPRETEiJ_G0025619	Stau1	84	92.079	ENSPVAG00000015019	STAU1	71	92.079	Pteropus_vampyrus
MGP_SPRETEiJ_G0025619	Stau1	100	71.341	ENSPNYG00000014436	stau1	71	71.341	Pundamilia_nyererei
MGP_SPRETEiJ_G0025619	Stau1	100	69.293	ENSPNAG00000011323	stau1	76	69.433	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025619	Stau1	100	98.182	ENSRNOG00000007781	Stau1	100	98.182	Rattus_norvegicus
MGP_SPRETEiJ_G0025619	Stau1	100	90.707	ENSRBIG00000037345	STAU1	99	90.707	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025619	Stau1	100	91.002	ENSRROG00000039008	STAU1	99	90.612	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025619	Stau1	100	90.798	ENSSBOG00000034448	STAU1	99	86.912	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025619	Stau1	100	87.117	ENSSHAG00000009492	STAU1	83	87.117	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025619	Stau1	100	73.511	ENSSFOG00015021497	stau1	85	70.392	Scleropages_formosus
MGP_SPRETEiJ_G0025619	Stau1	100	71.079	ENSSMAG00000017410	stau1	71	71.224	Scophthalmus_maximus
MGP_SPRETEiJ_G0025619	Stau1	100	71.894	ENSSDUG00000019439	stau1	71	71.894	Seriola_dumerili
MGP_SPRETEiJ_G0025619	Stau1	100	71.894	ENSSLDG00000025040	stau1	71	71.894	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025619	Stau1	100	82.077	ENSSPUG00000017983	STAU1	73	82.857	Sphenodon_punctatus
MGP_SPRETEiJ_G0025619	Stau1	100	71.487	ENSSPAG00000019275	stau1	71	71.487	Stegastes_partitus
MGP_SPRETEiJ_G0025619	Stau1	100	89.775	ENSSSCG00000027444	STAU1	99	89.775	Sus_scrofa
MGP_SPRETEiJ_G0025619	Stau1	99	83.503	ENSTGUG00000008784	STAU1	69	83.503	Taeniopygia_guttata
MGP_SPRETEiJ_G0025619	Stau1	100	71.193	ENSTRUG00000005837	stau1	70	71.869	Takifugu_rubripes
MGP_SPRETEiJ_G0025619	Stau1	99	70.143	ENSTNIG00000014732	stau1	73	69.838	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025619	Stau1	100	76.327	ENSTBEG00000009404	STAU1	85	76.327	Tupaia_belangeri
MGP_SPRETEiJ_G0025619	Stau1	94	86.147	ENSTTRG00000004285	STAU1	80	86.147	Tursiops_truncatus
MGP_SPRETEiJ_G0025619	Stau1	100	88.306	ENSUAMG00000025449	STAU1	99	88.306	Ursus_americanus
MGP_SPRETEiJ_G0025619	Stau1	96	83.765	ENSUMAG00000024475	STAU1	98	83.765	Ursus_maritimus
MGP_SPRETEiJ_G0025619	Stau1	100	89.366	ENSVPAG00000001313	STAU1	85	89.366	Vicugna_pacos
MGP_SPRETEiJ_G0025619	Stau1	100	88.911	ENSVVUG00000022325	STAU1	73	88.911	Vulpes_vulpes
MGP_SPRETEiJ_G0025619	Stau1	99	77.366	ENSXETG00000001783	stau1	70	77.572	Xenopus_tropicalis
MGP_SPRETEiJ_G0025619	Stau1	62	64.964	ENSXCOG00000008804	stau1	72	67.021	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025619	Stau1	99	70.408	ENSXMAG00000016175	stau1	71	70.385	Xiphophorus_maculatus