EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0025643 (Gene tree)
Gene ID
-
Gene Symbol
Sall4
Alias
5730441M18Rik|C330011P20Rik|Tex20
Full Name
spalt like transcription factor 4
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
24003 bases
Position
chr2:171294506-171318508
Accession
2139360
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2916
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2926
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2936
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2946
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2956
MGP_SPRETEiJ_P0058570zf-C2H2PF00096.261.4e-2966
MGP_SPRETEiJ_P0058573zf-C2H2PF00096.262e-1312
MGP_SPRETEiJ_P0058573zf-C2H2PF00096.262e-1322
MGP_SPRETEiJ_P0058572zf-C2H2PF00096.263.2e-1112
MGP_SPRETEiJ_P0058572zf-C2H2PF00096.263.2e-1122
MGP_SPRETEiJ_P0058571zf-C2H2PF00096.263.3e-0812
MGP_SPRETEiJ_P0058571zf-C2H2PF00096.263.3e-0822
MGP_SPRETEiJ_P0058570zf-metPF12874.72.3e-1111
MGP_SPRETEiJ_P0058573zf-metPF12874.71.4e-0912
MGP_SPRETEiJ_P0058573zf-metPF12874.71.4e-0922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0058570-5052-MGP_SPRETEiJ_P00585701067 (aa)--
MGP_SPRETEiJ_T0058571-3720-MGP_SPRETEiJ_P0058571623 (aa)--
MGP_SPRETEiJ_T0058572-2512-MGP_SPRETEiJ_P0058572278 (aa)--
MGP_SPRETEiJ_T0058573-393-MGP_SPRETEiJ_P0058573131 (aa)-UPI0000D779FA
MGP_SPRETEiJ_T0058574-773-MGP_SPRETEiJ_P0058574215 (aa)--
MGP_SPRETEiJ_T0058575-423--- (aa)--
MGP_SPRETEiJ_T0058576-328--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0025643's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025643's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0025643Sall49884.507MGP_SPRETEiJ_G0023357Sall36665.385
MGP_SPRETEiJ_G0025643Sall48753.333MGP_SPRETEiJ_G0023360Zfp2367753.333
MGP_SPRETEiJ_G0025643Sall410064.706MGP_SPRETEiJ_G0032480Sall19564.706
MGP_SPRETEiJ_G0025643Sall47933.803MGP_SPRETEiJ_G0017233Zfp6727143.590
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0025643Sall410095.833ENSG00000101115SALL410078.151Homo_sapiens
MGP_SPRETEiJ_G0025643Sall410084.722ENSAPOG00000002465sall410042.278Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025643Sall410095.833ENSAMEG00000013250-10072.955Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025643Sall49380.556ENSACIG00000017298sall410041.724Amphilophus_citrinellus
MGP_SPRETEiJ_G0025643Sall410084.722ENSAOCG00000023678sall410042.919Amphiprion_ocellaris
MGP_SPRETEiJ_G0025643Sall410084.722ENSAPEG00000000751sall410042.919Amphiprion_percula
MGP_SPRETEiJ_G0025643Sall410084.722ENSATEG00000024480sall410042.624Anabas_testudineus
MGP_SPRETEiJ_G0025643Sall49887.500ENSAPLG00000006498SALL410052.129Anas_platyrhynchos
MGP_SPRETEiJ_G0025643Sall410087.500ENSACAG00000012748SALL410052.170Anolis_carolinensis
MGP_SPRETEiJ_G0025643Sall410095.833ENSANAG00000023352SALL410076.596Aotus_nancymaae
MGP_SPRETEiJ_G0025643Sall410081.944ENSACLG00000017851sall410041.897Astatotilapia_calliptera
MGP_SPRETEiJ_G0025643Sall410086.111ENSAMXG00000001254sall49943.649Astyanax_mexicanus
MGP_SPRETEiJ_G0025643Sall410091.667ENSBTAG00000003101SALL410067.963Bos_taurus
MGP_SPRETEiJ_G0025643Sall410095.833ENSCJAG00000000591SALL49973.903Callithrix_jacchus
MGP_SPRETEiJ_G0025643Sall410094.444ENSCAFG00000011738-10072.719Canis_familiaris
MGP_SPRETEiJ_G0025643Sall410094.444ENSCAFG00020021870SALL410072.626Canis_lupus_dingo
MGP_SPRETEiJ_G0025643Sall410087.500ENSCHIG00000026270SALL410067.098Capra_hircus
MGP_SPRETEiJ_G0025643Sall410095.833ENSTSYG00000007359SALL410075.630Carlito_syrichta
MGP_SPRETEiJ_G0025643Sall49991.549ENSCAPG00000012135SALL49772.271Cavia_aperea
MGP_SPRETEiJ_G0025643Sall410079.211ENSCPOG00000036300-10079.211Cavia_porcellus
MGP_SPRETEiJ_G0025643Sall49979.231ENSCPOG00000038489-9991.429Cavia_porcellus
MGP_SPRETEiJ_G0025643Sall410094.444ENSCCAG00000029512-10071.493Cebus_capucinus
MGP_SPRETEiJ_G0025643Sall410095.833ENSCATG00000030757SALL410076.596Cercocebus_atys
MGP_SPRETEiJ_G0025643Sall410091.667ENSCLAG00000010479SALL410080.142Chinchilla_lanigera
MGP_SPRETEiJ_G0025643Sall410095.833ENSCSAG00000015269SALL410073.998Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025643Sall49887.500ENSCPBG00000014995SALL410052.526Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025643Sall410095.833ENSCANG00000036463SALL410073.812Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025643Sall410095.833ENSCGRG00001019569Sall410083.813Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025643Sall410095.833ENSCGRG00000000462Sall410087.786Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025643Sall410084.722ENSCSEG00000014604sall410042.192Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025643Sall410083.333ENSCVAG00000010815sall410042.264Cyprinodon_variegatus
MGP_SPRETEiJ_G0025643Sall410084.722ENSDARG00000044485sall49942.331Danio_rerio
MGP_SPRETEiJ_G0025643Sall410094.444ENSDNOG00000040633SALL410072.186Dasypus_novemcinctus
MGP_SPRETEiJ_G0025643Sall410088.889ENSDORG00000012841Sall410086.517Dipodomys_ordii
MGP_SPRETEiJ_G0025643Sall48971.084ENSETEG00000012475-6667.545Echinops_telfairi
MGP_SPRETEiJ_G0025643Sall45170.370ENSEBUG00000015425-5870.370Eptatretus_burgeri
MGP_SPRETEiJ_G0025643Sall410095.833ENSECAG00000018533SALL410073.557Equus_caballus
MGP_SPRETEiJ_G0025643Sall410095.833ENSEEUG00000003649SALL49970.495Erinaceus_europaeus
MGP_SPRETEiJ_G0025643Sall410084.722ENSELUG00000005696sall410042.905Esox_lucius
MGP_SPRETEiJ_G0025643Sall410094.444ENSFCAG00000002822SALL410075.177Felis_catus
MGP_SPRETEiJ_G0025643Sall49890.141ENSFALG00000013149SALL410051.258Ficedula_albicollis
MGP_SPRETEiJ_G0025643Sall410093.056ENSFDAG00000017812SALL410077.660Fukomys_damarensis
MGP_SPRETEiJ_G0025643Sall410086.111ENSFHEG00000014187sall410042.178Fundulus_heteroclitus
MGP_SPRETEiJ_G0025643Sall410084.722ENSGMOG00000003822sall410042.338Gadus_morhua
MGP_SPRETEiJ_G0025643Sall49887.500ENSGALG00000041365SALL410051.910Gallus_gallus
MGP_SPRETEiJ_G0025643Sall410086.111ENSGAFG00000019925sall410042.634Gambusia_affinis
MGP_SPRETEiJ_G0025643Sall49284.722ENSGACG00000011124sall410041.482Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025643Sall49887.500ENSGAGG00000002297SALL410052.389Gopherus_agassizii
MGP_SPRETEiJ_G0025643Sall410095.833ENSGGOG00000001832SALL410076.241Gorilla_gorilla
MGP_SPRETEiJ_G0025643Sall410081.944ENSHBUG00000007327sall410041.724Haplochromis_burtoni
MGP_SPRETEiJ_G0025643Sall410094.444ENSHGLG00000009043SALL49672.330Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025643Sall410094.444ENSHGLG00100002722SALL49672.427Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025643Sall410084.722ENSHCOG00000008519sall410042.046Hippocampus_comes
MGP_SPRETEiJ_G0025643Sall410086.111ENSIPUG00000019170sall49942.760Ictalurus_punctatus
MGP_SPRETEiJ_G0025643Sall410083.969ENSSTOG00000025002SALL410094.366Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025643Sall49898.611ENSJJAG00000020688Sall49898.592Jaculus_jaculus
MGP_SPRETEiJ_G0025643Sall410084.722ENSKMAG00000002501sall410042.411Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025643Sall45062.687ENSLBEG00000002594-6258.228Labrus_bergylta
MGP_SPRETEiJ_G0025643Sall410084.722ENSLBEG00000019951sall410042.746Labrus_bergylta
MGP_SPRETEiJ_G0025643Sall49956.198ENSLACG00000013898SALL410058.889Latimeria_chalumnae
MGP_SPRETEiJ_G0025643Sall410084.722ENSLOCG00000002427sall410044.795Lepisosteus_oculatus
MGP_SPRETEiJ_G0025643Sall410097.222ENSLAFG00000004309SALL410073.483Loxodonta_africana
MGP_SPRETEiJ_G0025643Sall410095.833ENSMFAG00000027169SALL410074.185Macaca_fascicularis
MGP_SPRETEiJ_G0025643Sall410095.833ENSMMUG00000003870SALL410078.571Macaca_mulatta
MGP_SPRETEiJ_G0025643Sall410095.833ENSMNEG00000035995SALL410076.596Macaca_nemestrina
MGP_SPRETEiJ_G0025643Sall410095.833ENSMLEG00000030467SALL410073.998Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025643Sall410084.722ENSMAMG00000005223sall410042.809Mastacembelus_armatus
MGP_SPRETEiJ_G0025643Sall410081.944ENSMZEG00005023418sall410041.969Maylandia_zebra
MGP_SPRETEiJ_G0025643Sall49887.500ENSMGAG00000009344SALL49965.385Meleagris_gallopavo
MGP_SPRETEiJ_G0025643Sall410093.056ENSMAUG00000015814Sall410093.056Mesocricetus_auratus
MGP_SPRETEiJ_G0025643Sall410097.222ENSMICG00000000027SALL410075.986Microcebus_murinus
MGP_SPRETEiJ_G0025643Sall410094.521ENSMOCG00000018245Sall410094.521Microtus_ochrogaster
MGP_SPRETEiJ_G0025643Sall410084.722ENSMMOG00000014929sall410042.192Mola_mola
MGP_SPRETEiJ_G0025643Sall410086.111ENSMODG00000016387SALL49756.021Monodelphis_domestica
MGP_SPRETEiJ_G0025643Sall410084.722ENSMALG00000018709sall410042.747Monopterus_albus
MGP_SPRETEiJ_G0025643Sall4100100.000MGP_CAROLIEiJ_G0024723Sall4100100.000Mus_caroli
MGP_SPRETEiJ_G0025643Sall4100100.000ENSMUSG00000027547Sall4100100.000Mus_musculus
MGP_SPRETEiJ_G0025643Sall410098.611MGP_PahariEiJ_G0026164Sall410098.611Mus_pahari
MGP_SPRETEiJ_G0025643Sall49894.444ENSMPUG00000017543SALL49672.263Mustela_putorius_furo
MGP_SPRETEiJ_G0025643Sall49888.889ENSMLUG00000008405-10064.700Myotis_lucifugus
MGP_SPRETEiJ_G0025643Sall49891.667ENSMLUG00000007060-10071.359Myotis_lucifugus
MGP_SPRETEiJ_G0025643Sall49471.212ENSMLUG00000028073-9951.824Myotis_lucifugus
MGP_SPRETEiJ_G0025643Sall410094.444ENSNGAG00000017833Sall410081.362Nannospalax_galili
MGP_SPRETEiJ_G0025643Sall49781.944ENSNBRG00000001829sall410041.902Neolamprologus_brichardi
MGP_SPRETEiJ_G0025643Sall410095.833ENSNLEG00000007013SALL410073.905Nomascus_leucogenys
MGP_SPRETEiJ_G0025643Sall410086.111ENSMEUG00000005793-9961.538Notamacropus_eugenii
MGP_SPRETEiJ_G0025643Sall410095.833ENSOPRG00000011640SALL410070.714Ochotona_princeps
MGP_SPRETEiJ_G0025643Sall410081.944ENSONIG00000016557sall410042.038Oreochromis_niloticus
MGP_SPRETEiJ_G0025643Sall410088.889ENSOANG00000008667SALL49756.954Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025643Sall49992.958ENSOCUG00000011797SALL410071.691Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025643Sall49986.111ENSORLG00000016130sall410043.298Oryzias_latipes
MGP_SPRETEiJ_G0025643Sall49986.111ENSORLG00020007339sall410042.101Oryzias_latipes_hni
MGP_SPRETEiJ_G0025643Sall49986.111ENSORLG00015002265sall410042.361Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025643Sall49986.111ENSOMEG00000017344sall410041.899Oryzias_melastigma
MGP_SPRETEiJ_G0025643Sall410094.444ENSOGAG00000013799SALL49972.447Otolemur_garnettii
MGP_SPRETEiJ_G0025643Sall410084.722ENSOARG00000014570SALL410063.104Ovis_aries
MGP_SPRETEiJ_G0025643Sall410095.833ENSPPAG00000038064SALL410076.241Pan_paniscus
MGP_SPRETEiJ_G0025643Sall410095.833ENSPPRG00000008677SALL410074.468Panthera_pardus
MGP_SPRETEiJ_G0025643Sall410095.833ENSPTRG00000013631SALL410076.241Pan_troglodytes
MGP_SPRETEiJ_G0025643Sall410095.833ENSPANG00000021792SALL410076.596Papio_anubis
MGP_SPRETEiJ_G0025643Sall49387.324ENSPKIG00000007074sall410043.302Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025643Sall49887.500ENSPSIG00000009066SALL410052.083Pelodiscus_sinensis
MGP_SPRETEiJ_G0025643Sall410083.333ENSPMGG00000022551sall410041.401Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025643Sall410097.222ENSPEMG00000022706Sall410097.222Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025643Sall410087.500ENSPCIG00000022838SALL49754.926Phascolarctos_cinereus
MGP_SPRETEiJ_G0025643Sall410086.111ENSPFOG00000001442sall410042.597Poecilia_formosa
MGP_SPRETEiJ_G0025643Sall410086.111ENSPLAG00000008760sall410042.511Poecilia_latipinna
MGP_SPRETEiJ_G0025643Sall410086.111ENSPMEG00000008497sall410042.561Poecilia_mexicana
MGP_SPRETEiJ_G0025643Sall49985.915ENSPREG00000021140sall410042.708Poecilia_reticulata
MGP_SPRETEiJ_G0025643Sall410094.444ENSPPYG00000011138SALL410073.532Pongo_abelii
MGP_SPRETEiJ_G0025643Sall410094.444ENSPCAG00000004726SALL49968.436Procavia_capensis
MGP_SPRETEiJ_G0025643Sall410095.833ENSPCOG00000016321SALL410075.887Propithecus_coquereli
MGP_SPRETEiJ_G0025643Sall49890.278ENSPVAG00000002075SALL49471.129Pteropus_vampyrus
MGP_SPRETEiJ_G0025643Sall410081.944ENSPNYG00000021738sall410041.760Pundamilia_nyererei
MGP_SPRETEiJ_G0025643Sall410087.500ENSPNAG00000020929sall49942.539Pygocentrus_nattereri
MGP_SPRETEiJ_G0025643Sall410097.222ENSRNOG00000050035Sall410089.362Rattus_norvegicus
MGP_SPRETEiJ_G0025643Sall410095.833ENSRBIG00000039876SALL410074.356Rhinopithecus_bieti
MGP_SPRETEiJ_G0025643Sall410095.833ENSRROG00000036585SALL410073.719Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025643Sall410095.833ENSSBOG00000030011SALL410074.468Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025643Sall410086.111ENSSHAG00000018013SALL48864.286Sarcophilus_harrisii
MGP_SPRETEiJ_G0025643Sall49384.722ENSSFOG00015021075sall410043.071Scleropages_formosus
MGP_SPRETEiJ_G0025643Sall410084.722ENSSMAG00000019218sall49942.735Scophthalmus_maximus
MGP_SPRETEiJ_G0025643Sall410084.722ENSSDUG00000004657sall410042.002Seriola_dumerili
MGP_SPRETEiJ_G0025643Sall410084.722ENSSLDG00000004973sall410042.429Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025643Sall410084.722ENSSPAG00000001978sall410042.485Stegastes_partitus
MGP_SPRETEiJ_G0025643Sall49894.444ENSSSCG00000007479SALL410072.026Sus_scrofa
MGP_SPRETEiJ_G0025643Sall410054.027ENSTGUG00000018244-10053.356Taeniopygia_guttata
MGP_SPRETEiJ_G0025643Sall410084.722ENSTRUG00000007410sall410043.377Takifugu_rubripes
MGP_SPRETEiJ_G0025643Sall45061.194ENSTNIG00000013008-5567.213Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025643Sall410084.722ENSTNIG00000012460sall410042.509Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025643Sall410095.833ENSTTRG00000007753SALL49970.302Tursiops_truncatus
MGP_SPRETEiJ_G0025643Sall410095.833ENSUAMG00000010113SALL410073.141Ursus_americanus
MGP_SPRETEiJ_G0025643Sall410095.833ENSUMAG00000024274SALL49973.159Ursus_maritimus
MGP_SPRETEiJ_G0025643Sall49885.915ENSXETG00000012326sall410046.713Xenopus_tropicalis
MGP_SPRETEiJ_G0025643Sall410086.111ENSXCOG00000015467sall410040.177Xiphophorus_couchianus
MGP_SPRETEiJ_G0025643Sall410086.111ENSXMAG00000012692sall410040.760Xiphophorus_maculatus

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