EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025645 (Gene tree)
Gene ID: -
Gene Symbol: Tshz2
Alias: 2900073F20Rik|Mtsh2|Sdccag33l|Tsh2|Zfp218|teashirt2
Full Name: teashirt zinc finger family member 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 475246 bases
Position: chr2:172267981-172743226
Accession: 2153084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0058586	zf-met	PF12874.7	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0058588	-	1130	-	MGP_SPRETEiJ_P0058588	208 (aa)	-	UPI0000006C04
MGP_SPRETEiJ_T0058585	-	3249	-	MGP_SPRETEiJ_P0058585	1024 (aa)	-	-
MGP_SPRETEiJ_T0058584	-	5094	-	MGP_SPRETEiJ_P0058584	1030 (aa)	-	-
MGP_SPRETEiJ_T0058587	-	3119	-	MGP_SPRETEiJ_P0058587	522 (aa)	-	-
MGP_SPRETEiJ_T0058586	-	3246	-	MGP_SPRETEiJ_P0058586	561 (aa)	-	-
MGP_SPRETEiJ_T0058583	-	4327	-	MGP_SPRETEiJ_P0058583	1030 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025645	Tshz2	100	57.290	ENSAPOG00000002486	tshz2	55	56.947	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025645	Tshz2	100	57.118	ENSACIG00000017256	tshz2	55	56.633	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025645	Tshz2	100	57.290	ENSAOCG00000023687	tshz2	55	56.947	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025645	Tshz2	100	57.290	ENSAPEG00000000720	tshz2	55	56.947	Amphiprion_percula
MGP_SPRETEiJ_G0025645	Tshz2	100	57.363	ENSATEG00000024474	tshz2	55	56.803	Anabas_testudineus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.752	ENSACLG00000017920	tshz2	55	56.633	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025645	Tshz2	61	68.195	ENSAMXG00000001175	tshz2	54	56.627	Astyanax_mexicanus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.923	ENSCVAG00000010918	tshz2	55	56.610	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.873	ENSFHEG00000014202	tshz2	55	56.559	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.752	ENSHBUG00000007293	tshz2	55	56.633	Haplochromis_burtoni
MGP_SPRETEiJ_G0025645	Tshz2	60	50.289	ENSMAMG00000009602	tshz3b	100	50.289	Mastacembelus_armatus
MGP_SPRETEiJ_G0025645	Tshz2	100	57.388	ENSMAMG00000005195	tshz2	55	56.627	Mastacembelus_armatus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.752	ENSMZEG00005023416	tshz2	55	56.633	Maylandia_zebra
MGP_SPRETEiJ_G0025645	Tshz2	100	56.799	ENSMMOG00000014934	tshz2	55	56.314	Mola_mola
MGP_SPRETEiJ_G0025645	Tshz2	100	56.873	ENSMALG00000018673	tshz2	56	56.729	Monopterus_albus
MGP_SPRETEiJ_G0025645	Tshz2	100	99.822	ENSMUSG00000047907	Tshz2	100	99.822	Mus_musculus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.581	ENSNBRG00000001911	tshz2	55	56.463	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025645	Tshz2	100	56.410	ENSONIG00000016558	tshz2	55	55.932	Oreochromis_niloticus
MGP_SPRETEiJ_G0025645	Tshz2	100	57.192	ENSORLG00000016111	tshz2	55	56.701	Oryzias_latipes
MGP_SPRETEiJ_G0025645	Tshz2	100	57.266	ENSORLG00020007414	tshz2	55	56.529	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025645	Tshz2	100	57.414	ENSOMEG00000017379	tshz2	55	56.897	Oryzias_melastigma
MGP_SPRETEiJ_G0025645	Tshz2	99	57.193	ENSPMGG00000019609	tshz2	54	57.394	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.529	ENSPFOG00000020779	tshz2	63	55.822	Poecilia_formosa
MGP_SPRETEiJ_G0025645	Tshz2	100	56.529	ENSPLAG00000012397	tshz2	56	55.822	Poecilia_latipinna
MGP_SPRETEiJ_G0025645	Tshz2	100	56.529	ENSPMEG00000008480	tshz2	55	55.822	Poecilia_mexicana
MGP_SPRETEiJ_G0025645	Tshz2	100	56.752	ENSPNYG00000021698	tshz2	55	56.633	Pundamilia_nyererei
MGP_SPRETEiJ_G0025645	Tshz2	99	55.155	ENSPNAG00000020910	tshz2	54	57.746	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025645	Tshz2	100	56.775	ENSSDUG00000004636	tshz2	55	56.463	Seriola_dumerili
MGP_SPRETEiJ_G0025645	Tshz2	100	56.604	ENSSLDG00000005026	tshz2	55	56.293	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025645	Tshz2	100	57.461	ENSSPAG00000001957	tshz2	56	57.118	Stegastes_partitus
MGP_SPRETEiJ_G0025645	Tshz2	100	55.594	ENSTRUG00000007670	tshz2	55	55.786	Takifugu_rubripes
MGP_SPRETEiJ_G0025645	Tshz2	100	56.357	ENSXCOG00000015459	tshz2	55	55.651	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025645	Tshz2	100	56.529	ENSXMAG00000012685	tshz2	55	55.822	Xiphophorus_maculatus