EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025794 (Gene tree)
Gene ID: -
Gene Symbol: Ythdf3
Alias: 9130022A11Rik
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 35971 bases
Position: chr3:12996110-13032080
Accession: 1918850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0059223	YTH	PF04146.15	5.1e-40	1	1
MGP_SPRETEiJ_P0059225	YTH	PF04146.15	5.1e-40	1	1
MGP_SPRETEiJ_P0059226	YTH	PF04146.15	5.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0059223	-	5098	-	MGP_SPRETEiJ_P0059223	585 (aa)	-	-
MGP_SPRETEiJ_T0059227	-	1715	-	MGP_SPRETEiJ_P0059227	547 (aa)	-	-
MGP_SPRETEiJ_T0059226	-	4925	-	MGP_SPRETEiJ_P0059226	596 (aa)	-	-
MGP_SPRETEiJ_T0059225	-	3193	-	MGP_SPRETEiJ_P0059225	589 (aa)	-	-
MGP_SPRETEiJ_T0059224	-	717	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025794	Ythdf3	100	65.882	MGP_SPRETEiJ_G0025715	Ythdf1	97	66.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSG00000185728	YTHDF3	100	99.099	Homo_sapiens
MGP_SPRETEiJ_G0025794	Ythdf3	100	75.080	ENSAPOG00000024006	ythdf3	100	75.610	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025794	Ythdf3	100	97.607	ENSAMEG00000018113	YTHDF3	100	97.607	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025794	Ythdf3	99	76.804	ENSACIG00000022287	ythdf3	99	75.758	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025794	Ythdf3	99	69.301	ENSATEG00000011478	ythdf3	94	93.514	Anabas_testudineus
MGP_SPRETEiJ_G0025794	Ythdf3	98	93.345	ENSAPLG00000011329	YTHDF3	97	94.831	Anas_platyrhynchos
MGP_SPRETEiJ_G0025794	Ythdf3	100	91.966	ENSACAG00000016837	YTHDF3	100	91.282	Anolis_carolinensis
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSANAG00000037920	YTHDF3	100	98.462	Aotus_nancymaae
MGP_SPRETEiJ_G0025794	Ythdf3	99	80.479	ENSAMXG00000030366	ythdf3	97	76.531	Astyanax_mexicanus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.120	ENSBTAG00000018557	YTHDF3	100	98.120	Bos_taurus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSCJAG00000009217	YTHDF3	100	98.462	Callithrix_jacchus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.132	ENSCAFG00000007215	YTHDF3	100	98.132	Canis_familiaris
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSCAFG00020015995	YTHDF3	100	98.315	Canis_lupus_dingo
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSCHIG00000026460	YTHDF3	100	98.462	Capra_hircus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.132	ENSTSYG00000009117	YTHDF3	100	98.132	Carlito_syrichta
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.574	ENSCAPG00000014006	YTHDF3	100	97.574	Cavia_aperea
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSCPOG00000002961	YTHDF3	100	98.291	Cavia_porcellus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSCCAG00000022316	YTHDF3	100	98.315	Cebus_capucinus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSCATG00000038669	YTHDF3	100	98.632	Cercocebus_atys
MGP_SPRETEiJ_G0025794	Ythdf3	99	98.440	ENSCLAG00000002515	YTHDF3	100	98.440	Chinchilla_lanigera
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSCSAG00000014280	YTHDF3	100	98.632	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025794	Ythdf3	99	96.481	ENSCHOG00000010194	YTHDF3	97	97.336	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025794	Ythdf3	100	92.321	ENSCPBG00000021405	YTHDF3	100	95.222	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSCANG00000032631	YTHDF3	100	98.632	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.316	ENSCGRG00001021204	Ythdf3	100	99.316	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.642	ENSCGRG00000005613	-	100	98.787	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025794	Ythdf3	71	67.784	ENSCGRG00000008289	-	100	68.608	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025794	Ythdf3	99	76.289	ENSCVAG00000018114	ythdf3	99	75.809	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025794	Ythdf3	100	78.247	ENSDARG00000057939	ythdf3	100	78.843	Danio_rerio
MGP_SPRETEiJ_G0025794	Ythdf3	100	97.114	ENSDNOG00000037156	YTHDF3	100	97.114	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025794	Ythdf3	100	97.949	ENSDORG00000014699	Ythdf3	100	97.949	Dipodomys_ordii
MGP_SPRETEiJ_G0025794	Ythdf3	97	97.895	ENSETEG00000007144	YTHDF3	100	97.895	Echinops_telfairi
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSEASG00005016224	YTHDF3	100	98.462	Equus_asinus_asinus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSECAG00000011093	YTHDF3	100	98.462	Equus_caballus
MGP_SPRETEiJ_G0025794	Ythdf3	97	79.021	ENSELUG00000014824	ythdf3	99	77.391	Esox_lucius
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSFCAG00000025314	YTHDF3	100	98.291	Felis_catus
MGP_SPRETEiJ_G0025794	Ythdf3	99	92.907	ENSFALG00000005503	YTHDF3	100	94.944	Ficedula_albicollis
MGP_SPRETEiJ_G0025794	Ythdf3	99	98.267	ENSFDAG00000002735	YTHDF3	100	98.267	Fukomys_damarensis
MGP_SPRETEiJ_G0025794	Ythdf3	100	75.000	ENSFHEG00000016395	ythdf3	97	76.708	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025794	Ythdf3	100	75.083	ENSGMOG00000014950	ythdf3	100	73.762	Gadus_morhua
MGP_SPRETEiJ_G0025794	Ythdf3	100	93.504	ENSGALG00000039774	YTHDF3	100	95.043	Gallus_gallus
MGP_SPRETEiJ_G0025794	Ythdf3	100	92.150	ENSGAGG00000003851	YTHDF3	100	95.051	Gopherus_agassizii
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.302	ENSGGOG00000027681	YTHDF3	100	98.689	Gorilla_gorilla
MGP_SPRETEiJ_G0025794	Ythdf3	98	71.852	ENSHBUG00000018631	ythdf3	97	73.456	Haplochromis_burtoni
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSHGLG00000009954	YTHDF3	100	98.291	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025794	Ythdf3	99	98.267	ENSHGLG00100012403	YTHDF3	100	98.267	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025794	Ythdf3	99	70.115	ENSHCOG00000015277	ythdf3	96	70.051	Hippocampus_comes
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.120	ENSSTOG00000027792	YTHDF3	100	98.120	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025794	Ythdf3	99	98.440	ENSJJAG00000017742	Ythdf3	100	98.440	Jaculus_jaculus
MGP_SPRETEiJ_G0025794	Ythdf3	98	73.693	ENSKMAG00000008447	ythdf3	100	74.230	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025794	Ythdf3	100	82.972	ENSLACG00000002281	YTHDF3	100	82.972	Latimeria_chalumnae
MGP_SPRETEiJ_G0025794	Ythdf3	100	95.973	ENSLAFG00000016052	YTHDF3	100	95.973	Loxodonta_africana
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSMFAG00000043451	YTHDF3	100	98.689	Macaca_fascicularis
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSMMUG00000006729	YTHDF3	100	98.689	Macaca_mulatta
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSMNEG00000031200	YTHDF3	100	98.689	Macaca_nemestrina
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSMLEG00000036763	YTHDF3	100	98.632	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025794	Ythdf3	100	73.693	ENSMAMG00000000414	ythdf3	100	73.748	Mastacembelus_armatus
MGP_SPRETEiJ_G0025794	Ythdf3	98	71.852	ENSMZEG00005021836	ythdf3	97	73.456	Maylandia_zebra
MGP_SPRETEiJ_G0025794	Ythdf3	100	92.650	ENSMGAG00000011168	YTHDF3	100	94.188	Meleagris_gallopavo
MGP_SPRETEiJ_G0025794	Ythdf3	71	95.361	ENSMAUG00000012560	Ythdf3	99	94.330	Mesocricetus_auratus
MGP_SPRETEiJ_G0025794	Ythdf3	71	76.804	ENSMICG00000009379	-	100	76.203	Microcebus_murinus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.642	ENSMICG00000036869	-	100	98.642	Microcebus_murinus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.302	ENSMOCG00000011947	Ythdf3	100	98.440	Microtus_ochrogaster
MGP_SPRETEiJ_G0025794	Ythdf3	99	66.052	ENSMMOG00000003402	ythdf3	92	89.894	Mola_mola
MGP_SPRETEiJ_G0025794	Ythdf3	100	96.587	ENSMODG00000008255	YTHDF3	100	96.587	Monodelphis_domestica
MGP_SPRETEiJ_G0025794	Ythdf3	98	71.107	ENSMALG00000000147	ythdf3	91	92.432	Monopterus_albus
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.832	MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.832	Mus_caroli
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.832	ENSMUSG00000047213	Ythdf3	100	99.832	Mus_musculus
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.161	MGP_PahariEiJ_G0026310	Ythdf3	100	99.161	Mus_pahari
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSMPUG00000009857	YTHDF3	100	98.291	Mustela_putorius_furo
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.935	ENSMLUG00000006541	YTHDF3	99	97.935	Myotis_lucifugus
MGP_SPRETEiJ_G0025794	Ythdf3	97	98.684	ENSNGAG00000018434	Ythdf3	96	98.321	Nannospalax_galili
MGP_SPRETEiJ_G0025794	Ythdf3	87	86.522	ENSNBRG00000023433	ythdf3	97	75.652	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSNLEG00000003872	YTHDF3	100	98.462	Nomascus_leucogenys
MGP_SPRETEiJ_G0025794	Ythdf3	99	96.041	ENSMEUG00000011285	YTHDF3	100	96.041	Notamacropus_eugenii
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.574	ENSODEG00000002033	YTHDF3	100	97.574	Octodon_degus
MGP_SPRETEiJ_G0025794	Ythdf3	99	92.771	ENSOANG00000005053	YTHDF3	100	93.115	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025794	Ythdf3	100	96.980	ENSOCUG00000008723	YTHDF3	100	96.980	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025794	Ythdf3	100	74.838	ENSORLG00020014684	ythdf3	92	71.555	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025794	Ythdf3	100	74.757	ENSOMEG00000008212	ythdf3	99	75.128	Oryzias_melastigma
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.774	ENSOGAG00000002302	YTHDF3	99	97.774	Otolemur_garnettii
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.588	ENSOARG00000016882	YTHDF3	98	98.087	Ovis_aries
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSPPAG00000043483	YTHDF3	100	98.291	Pan_paniscus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSPPRG00000004665	YTHDF3	100	98.291	Panthera_pardus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.132	ENSPTIG00000021537	YTHDF3	100	98.315	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSPTRG00000049135	YTHDF3	100	98.462	Pan_troglodytes
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.632	ENSPANG00000008030	YTHDF3	100	98.632	Papio_anubis
MGP_SPRETEiJ_G0025794	Ythdf3	99	80.000	ENSPKIG00000008298	ythdf3	96	80.071	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025794	Ythdf3	100	94.369	ENSPSIG00000015861	YTHDF3	100	93.345	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025794	Ythdf3	98	75.185	ENSPMGG00000023791	ythdf3	95	75.360	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.491	ENSPEMG00000020975	Ythdf3	100	99.653	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025794	Ythdf3	100	96.758	ENSPCIG00000017629	YTHDF3	100	96.758	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025794	Ythdf3	100	74.235	ENSPFOG00000006082	ythdf3	100	73.984	Poecilia_formosa
MGP_SPRETEiJ_G0025794	Ythdf3	100	74.396	ENSPLAG00000006902	ythdf3	100	74.146	Poecilia_latipinna
MGP_SPRETEiJ_G0025794	Ythdf3	99	75.685	ENSPMEG00000012922	ythdf3	100	73.984	Poecilia_mexicana
MGP_SPRETEiJ_G0025794	Ythdf3	99	76.329	ENSPREG00000019781	ythdf3	99	75.085	Poecilia_reticulata
MGP_SPRETEiJ_G0025794	Ythdf3	91	98.936	ENSPPYG00000018626	YTHDF3	100	97.337	Pongo_abelii
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.241	ENSPCAG00000016282	YTHDF3	100	97.241	Procavia_capensis
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.803	ENSPCOG00000004856	YTHDF3	100	98.803	Propithecus_coquereli
MGP_SPRETEiJ_G0025794	Ythdf3	85	99.468	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
MGP_SPRETEiJ_G0025794	Ythdf3	87	86.522	ENSPNYG00000002949	ythdf3	96	87.156	Pundamilia_nyererei
MGP_SPRETEiJ_G0025794	Ythdf3	100	99.658	ENSRNOG00000010084	Ythdf3	100	99.658	Rattus_norvegicus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSRBIG00000036465	YTHDF3	100	98.462	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSRROG00000035231	YTHDF3	100	98.291	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSSBOG00000035287	YTHDF3	100	98.462	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025794	Ythdf3	100	96.252	ENSSHAG00000009482	YTHDF3	100	96.252	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025794	Ythdf3	99	77.589	ENSSMAG00000014999	ythdf3	96	65.858	Scophthalmus_maximus
MGP_SPRETEiJ_G0025794	Ythdf3	99	76.804	ENSSLDG00000005029	ythdf3	100	75.772	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025794	Ythdf3	99	97.043	ENSSARG00000007626	YTHDF3	99	98.246	Sorex_araneus
MGP_SPRETEiJ_G0025794	Ythdf3	99	92.414	ENSSPUG00000009390	YTHDF3	98	95.070	Sphenodon_punctatus
MGP_SPRETEiJ_G0025794	Ythdf3	96	98.482	ENSSSCG00000033144	YTHDF3	100	98.502	Sus_scrofa
MGP_SPRETEiJ_G0025794	Ythdf3	99	92.222	ENSTGUG00000011243	YTHDF3	98	94.652	Taeniopygia_guttata
MGP_SPRETEiJ_G0025794	Ythdf3	100	76.728	ENSTNIG00000012698	ythdf3	92	73.945	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025794	Ythdf3	80	97.630	ENSTBEG00000005747	YTHDF3	81	97.630	Tupaia_belangeri
MGP_SPRETEiJ_G0025794	Ythdf3	99	88.966	ENSTTRG00000014564	YTHDF3	98	89.631	Tursiops_truncatus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.462	ENSUAMG00000012624	YTHDF3	100	98.462	Ursus_americanus
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.302	ENSUMAG00000014104	YTHDF3	100	98.302	Ursus_maritimus
MGP_SPRETEiJ_G0025794	Ythdf3	99	85.370	ENSVPAG00000008104	YTHDF3	98	84.183	Vicugna_pacos
MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	ENSVVUG00000018384	YTHDF3	100	98.291	Vulpes_vulpes
MGP_SPRETEiJ_G0025794	Ythdf3	100	87.863	ENSXETG00000021659	ythdf3	100	88.718	Xenopus_tropicalis
MGP_SPRETEiJ_G0025794	Ythdf3	99	74.252	ENSXCOG00000009687	ythdf3	99	75.680	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025794	Ythdf3	100	75.772	ENSXMAG00000009698	ythdf3	99	76.020	Xiphophorus_maculatus