EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025866 (Gene tree)
Gene ID: -
Gene Symbol: Mccc1
Alias: 1810045E08Rik|2310058B18Rik|MCCA|MCCalpha
Full Name: methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 42751 bases
Position: chr3:32913390-32956140
Accession: 1919289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0059596	RimK	PF08443.11	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0059601	-	802	-	MGP_SPRETEiJ_P0059601	201 (aa)	-	-
MGP_SPRETEiJ_T0059600	-	722	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0059602	-	757	-	MGP_SPRETEiJ_P0059602	84 (aa)	-	-
MGP_SPRETEiJ_T0059595	-	2930	-	MGP_SPRETEiJ_P0059595	255 (aa)	-	UPI000161171A
MGP_SPRETEiJ_T0059597	-	468	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0059596	-	2455	-	MGP_SPRETEiJ_P0059596	717 (aa)	-	-
MGP_SPRETEiJ_T0059599	-	2107	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0059598	-	6715	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025866	Mccc1	93	40.228	MGP_SPRETEiJ_G0020515	Pcca	92	40.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025866	Mccc1	99	84.637	ENSG00000078070	MCCC1	98	92.000	Homo_sapiens
MGP_SPRETEiJ_G0025866	Mccc1	99	82.542	ENSAMEG00000015967	MCCC1	98	83.027	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025866	Mccc1	76	69.708	ENSACIG00000023146	mccc1	93	81.840	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025866	Mccc1	96	76.403	ENSAPLG00000008989	MCCC1	97	76.403	Anas_platyrhynchos
MGP_SPRETEiJ_G0025866	Mccc1	99	83.876	ENSANAG00000028235	MCCC1	98	90.588	Aotus_nancymaae
MGP_SPRETEiJ_G0025866	Mccc1	95	71.512	ENSACLG00000026110	mccc1	98	73.770	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025866	Mccc1	92	74.359	ENSAMXG00000001531	mccc1	94	74.551	Astyanax_mexicanus
MGP_SPRETEiJ_G0025866	Mccc1	99	84.174	ENSBTAG00000006548	MCCC1	98	84.583	Bos_taurus
MGP_SPRETEiJ_G0025866	Mccc1	99	80.622	ENSCJAG00000005103	MCCC1	98	91.059	Callithrix_jacchus
MGP_SPRETEiJ_G0025866	Mccc1	99	83.876	ENSCAFG00000011749	MCCC1	98	83.876	Canis_familiaris
MGP_SPRETEiJ_G0025866	Mccc1	99	83.876	ENSCAFG00020001000	MCCC1	98	83.876	Canis_lupus_dingo
MGP_SPRETEiJ_G0025866	Mccc1	99	83.799	ENSCHIG00000025794	MCCC1	99	83.880	Capra_hircus
MGP_SPRETEiJ_G0025866	Mccc1	99	84.777	ENSTSYG00000012606	MCCC1	97	93.365	Carlito_syrichta
MGP_SPRETEiJ_G0025866	Mccc1	94	80.820	ENSCAPG00000012269	MCCC1	98	80.820	Cavia_aperea
MGP_SPRETEiJ_G0025866	Mccc1	99	80.307	ENSCPOG00000010866	MCCC1	98	80.764	Cavia_porcellus
MGP_SPRETEiJ_G0025866	Mccc1	99	85.615	ENSCATG00000037699	MCCC1	98	92.706	Cercocebus_atys
MGP_SPRETEiJ_G0025866	Mccc1	82	81.494	ENSCLAG00000014174	MCCC1	99	81.681	Chinchilla_lanigera
MGP_SPRETEiJ_G0025866	Mccc1	99	86.173	ENSCSAG00000013226	MCCC1	98	86.704	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025866	Mccc1	99	75.385	ENSCPBG00000000534	MCCC1	98	76.395	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025866	Mccc1	93	58.174	ENSCING00000019260	-	92	58.174	Ciona_intestinalis
MGP_SPRETEiJ_G0025866	Mccc1	93	57.687	ENSCING00000020099	-	99	57.687	Ciona_intestinalis
MGP_SPRETEiJ_G0025866	Mccc1	93	56.214	ENSCSAVG00000007062	-	99	54.318	Ciona_savignyi
MGP_SPRETEiJ_G0025866	Mccc1	85	86.928	ENSCANG00000037917	MCCC1	98	93.817	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025866	Mccc1	97	92.837	ENSCGRG00001012469	Mccc1	98	92.908	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025866	Mccc1	97	92.120	ENSCGRG00000002616	Mccc1	98	92.199	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025866	Mccc1	95	72.621	ENSCSEG00000019501	mccc1	95	72.701	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025866	Mccc1	95	73.021	ENSDARG00000102538	mccc1	96	73.139	Danio_rerio
MGP_SPRETEiJ_G0025866	Mccc1	100	83.149	ENSDNOG00000012070	MCCC1	98	83.803	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025866	Mccc1	100	82.802	ENSDORG00000000473	Mccc1	98	85.251	Dipodomys_ordii
MGP_SPRETEiJ_G0025866	Mccc1	99	76.955	ENSETEG00000008384	MCCC1	98	77.119	Echinops_telfairi
MGP_SPRETEiJ_G0025866	Mccc1	53	78.068	ENSEBUG00000016250	-	90	78.068	Eptatretus_burgeri
MGP_SPRETEiJ_G0025866	Mccc1	100	82.410	ENSEASG00005015339	MCCC1	99	93.734	Equus_asinus_asinus
MGP_SPRETEiJ_G0025866	Mccc1	99	83.520	ENSECAG00000008214	MCCC1	97	84.136	Equus_caballus
MGP_SPRETEiJ_G0025866	Mccc1	87	73.430	ENSEEUG00000011233	MCCC1	91	73.492	Erinaceus_europaeus
MGP_SPRETEiJ_G0025866	Mccc1	94	72.148	ENSELUG00000010299	mccc1	99	73.661	Esox_lucius
MGP_SPRETEiJ_G0025866	Mccc1	85	85.294	ENSFCAG00000000940	MCCC1	97	93.602	Felis_catus
MGP_SPRETEiJ_G0025866	Mccc1	96	77.746	ENSFALG00000008252	MCCC1	97	77.746	Ficedula_albicollis
MGP_SPRETEiJ_G0025866	Mccc1	99	77.086	ENSFDAG00000009183	MCCC1	98	77.479	Fukomys_damarensis
MGP_SPRETEiJ_G0025866	Mccc1	95	70.175	ENSGMOG00000008521	mccc1	98	70.175	Gadus_morhua
MGP_SPRETEiJ_G0025866	Mccc1	99	75.698	ENSGALG00000008785	MCCC1	92	77.266	Gallus_gallus
MGP_SPRETEiJ_G0025866	Mccc1	95	71.889	ENSGAFG00000010643	mccc1	98	71.118	Gambusia_affinis
MGP_SPRETEiJ_G0025866	Mccc1	91	78.440	ENSGAGG00000000770	MCCC1	99	78.440	Gopherus_agassizii
MGP_SPRETEiJ_G0025866	Mccc1	99	85.335	ENSGGOG00000002784	MCCC1	98	92.941	Gorilla_gorilla
MGP_SPRETEiJ_G0025866	Mccc1	95	71.512	ENSHBUG00000000956	mccc1	96	71.553	Haplochromis_burtoni
MGP_SPRETEiJ_G0025866	Mccc1	99	83.240	ENSHGLG00000014650	MCCC1	98	83.734	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025866	Mccc1	99	83.240	ENSHGLG00100015295	MCCC1	98	83.734	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025866	Mccc1	93	72.823	ENSHCOG00000010503	mccc1	98	72.876	Hippocampus_comes
MGP_SPRETEiJ_G0025866	Mccc1	99	72.034	ENSIPUG00000024615	mccc1	99	72.301	Ictalurus_punctatus
MGP_SPRETEiJ_G0025866	Mccc1	99	86.280	ENSSTOG00000010361	MCCC1	98	86.280	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025866	Mccc1	98	82.361	ENSJJAG00000003543	Mccc1	98	82.361	Jaculus_jaculus
MGP_SPRETEiJ_G0025866	Mccc1	92	73.605	ENSLBEG00000001741	mccc1	91	73.621	Labrus_bergylta
MGP_SPRETEiJ_G0025866	Mccc1	96	76.419	ENSLACG00000018119	MCCC1	96	76.419	Latimeria_chalumnae
MGP_SPRETEiJ_G0025866	Mccc1	96	67.001	ENSLOCG00000000778	mccc1	96	67.001	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025866	Mccc1	99	81.425	ENSLAFG00000018018	MCCC1	99	81.754	Loxodonta_africana
MGP_SPRETEiJ_G0025866	Mccc1	99	86.034	ENSMFAG00000000043	MCCC1	98	93.176	Macaca_fascicularis
MGP_SPRETEiJ_G0025866	Mccc1	85	87.582	ENSMMUG00000010553	MCCC1	98	93.176	Macaca_mulatta
MGP_SPRETEiJ_G0025866	Mccc1	99	82.123	ENSMNEG00000017163	MCCC1	99	87.418	Macaca_nemestrina
MGP_SPRETEiJ_G0025866	Mccc1	99	82.402	ENSMLEG00000039351	MCCC1	98	92.706	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025866	Mccc1	95	71.512	ENSMZEG00005015532	mccc1	96	71.553	Maylandia_zebra
MGP_SPRETEiJ_G0025866	Mccc1	96	77.890	ENSMGAG00000009494	MCCC1	99	77.890	Meleagris_gallopavo
MGP_SPRETEiJ_G0025866	Mccc1	99	84.218	ENSMICG00000048884	MCCC1	98	90.610	Microcebus_murinus
MGP_SPRETEiJ_G0025866	Mccc1	98	89.943	ENSMOCG00000003671	Mccc1	99	89.958	Microtus_ochrogaster
MGP_SPRETEiJ_G0025866	Mccc1	99	79.972	ENSMODG00000021288	MCCC1	95	81.097	Monodelphis_domestica
MGP_SPRETEiJ_G0025866	Mccc1	100	99.303	MGP_CAROLIEiJ_G0024932	Mccc1	100	99.303	Mus_caroli
MGP_SPRETEiJ_G0025866	Mccc1	100	99.721	ENSMUSG00000027709	Mccc1	100	99.721	Mus_musculus
MGP_SPRETEiJ_G0025866	Mccc1	97	83.671	ENSMPUG00000002371	MCCC1	87	83.671	Mustela_putorius_furo
MGP_SPRETEiJ_G0025866	Mccc1	99	83.077	ENSMLUG00000012257	MCCC1	97	84.023	Myotis_lucifugus
MGP_SPRETEiJ_G0025866	Mccc1	97	87.948	ENSNGAG00000001216	Mccc1	99	87.429	Nannospalax_galili
MGP_SPRETEiJ_G0025866	Mccc1	99	82.845	ENSNLEG00000005989	MCCC1	98	92.706	Nomascus_leucogenys
MGP_SPRETEiJ_G0025866	Mccc1	99	78.249	ENSOPRG00000007258	MCCC1	98	78.249	Ochotona_princeps
MGP_SPRETEiJ_G0025866	Mccc1	99	81.285	ENSODEG00000012286	MCCC1	98	81.754	Octodon_degus
MGP_SPRETEiJ_G0025866	Mccc1	95	71.806	ENSONIG00000008395	mccc1	96	71.843	Oreochromis_niloticus
MGP_SPRETEiJ_G0025866	Mccc1	92	80.974	ENSOANG00000011253	MCCC1	99	80.974	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025866	Mccc1	99	78.631	ENSOCUG00000012393	MCCC1	98	79.066	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025866	Mccc1	96	71.449	ENSORLG00000011678	mccc1	99	71.739	Oryzias_latipes
MGP_SPRETEiJ_G0025866	Mccc1	96	71.449	ENSORLG00020005680	mccc1	98	71.739	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025866	Mccc1	93	73.494	ENSORLG00015003526	mccc1	96	73.254	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025866	Mccc1	96	71.076	ENSOMEG00000011470	mccc1	97	71.182	Oryzias_melastigma
MGP_SPRETEiJ_G0025866	Mccc1	91	83.767	ENSOGAG00000000659	MCCC1	99	83.767	Otolemur_garnettii
MGP_SPRETEiJ_G0025866	Mccc1	97	85.260	ENSOARG00000020660	MCCC1	99	85.260	Ovis_aries
MGP_SPRETEiJ_G0025866	Mccc1	99	84.637	ENSPPAG00000036167	MCCC1	98	92.000	Pan_paniscus
MGP_SPRETEiJ_G0025866	Mccc1	85	84.804	ENSPPRG00000000127	MCCC1	97	93.128	Panthera_pardus
MGP_SPRETEiJ_G0025866	Mccc1	99	83.240	ENSPTIG00000018514	MCCC1	97	92.417	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025866	Mccc1	99	84.637	ENSPTRG00000015662	MCCC1	98	92.235	Pan_troglodytes
MGP_SPRETEiJ_G0025866	Mccc1	99	86.173	ENSPANG00000006870	MCCC1	98	93.176	Papio_anubis
MGP_SPRETEiJ_G0025866	Mccc1	96	76.377	ENSPSIG00000017510	MCCC1	99	77.370	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025866	Mccc1	92	68.835	ENSPMGG00000000155	mccc1	96	68.657	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025866	Mccc1	99	92.707	ENSPEMG00000014164	Mccc1	98	92.898	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025866	Mccc1	99	78.992	ENSPCIG00000013027	MCCC1	83	79.208	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025866	Mccc1	95	72.312	ENSPFOG00000019171	mccc1	96	72.238	Poecilia_formosa
MGP_SPRETEiJ_G0025866	Mccc1	95	72.165	ENSPLAG00000022735	mccc1	96	72.093	Poecilia_latipinna
MGP_SPRETEiJ_G0025866	Mccc1	95	72.165	ENSPMEG00000000664	mccc1	96	72.093	Poecilia_mexicana
MGP_SPRETEiJ_G0025866	Mccc1	99	85.615	ENSPPYG00000014331	MCCC1	98	86.139	Pongo_abelii
MGP_SPRETEiJ_G0025866	Mccc1	99	72.843	ENSPCAG00000003195	MCCC1	97	73.011	Procavia_capensis
MGP_SPRETEiJ_G0025866	Mccc1	100	84.743	ENSPCOG00000020095	MCCC1	98	90.845	Propithecus_coquereli
MGP_SPRETEiJ_G0025866	Mccc1	98	80.000	ENSPVAG00000013436	MCCC1	98	80.603	Pteropus_vampyrus
MGP_SPRETEiJ_G0025866	Mccc1	95	67.105	ENSPNAG00000025069	mccc1	97	67.052	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025866	Mccc1	99	95.378	ENSRNOG00000013293	Mccc1	99	95.378	Rattus_norvegicus
MGP_SPRETEiJ_G0025866	Mccc1	99	85.615	ENSRBIG00000038726	MCCC1	98	92.941	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025866	Mccc1	99	85.335	ENSRROG00000041247	MCCC1	98	92.706	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025866	Mccc1	92	85.997	ENSSBOG00000026219	MCCC1	98	92.548	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025866	Mccc1	96	79.798	ENSSHAG00000016104	MCCC1	99	79.798	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025866	Mccc1	98	72.119	ENSSFOG00015007784	mccc1	97	73.555	Scleropages_formosus
MGP_SPRETEiJ_G0025866	Mccc1	98	70.963	ENSSMAG00000019667	mccc1	93	74.141	Scophthalmus_maximus
MGP_SPRETEiJ_G0025866	Mccc1	92	77.626	ENSSPUG00000014366	MCCC1	99	77.626	Sphenodon_punctatus
MGP_SPRETEiJ_G0025866	Mccc1	95	71.576	ENSSPAG00000011206	mccc1	98	70.888	Stegastes_partitus
MGP_SPRETEiJ_G0025866	Mccc1	100	80.474	ENSSSCG00000025942	MCCC1	99	84.471	Sus_scrofa
MGP_SPRETEiJ_G0025866	Mccc1	94	78.519	ENSTGUG00000010506	MCCC1	99	78.519	Taeniopygia_guttata
MGP_SPRETEiJ_G0025866	Mccc1	93	78.657	ENSTBEG00000007988	MCCC1	99	78.657	Tupaia_belangeri
MGP_SPRETEiJ_G0025866	Mccc1	100	84.605	ENSTTRG00000016518	MCCC1	98	85.431	Tursiops_truncatus
MGP_SPRETEiJ_G0025866	Mccc1	64	88.865	ENSUAMG00000008378	MCCC1	98	92.271	Ursus_americanus
MGP_SPRETEiJ_G0025866	Mccc1	99	82.542	ENSUMAG00000006927	MCCC1	98	83.027	Ursus_maritimus
MGP_SPRETEiJ_G0025866	Mccc1	99	83.027	ENSVVUG00000006835	MCCC1	98	83.027	Vulpes_vulpes
MGP_SPRETEiJ_G0025866	Mccc1	97	75.144	ENSXETG00000016826	mccc1	97	75.144	Xenopus_tropicalis