EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026093 (Gene tree)
Gene ID: -
Gene Symbol: Gpatch4
Alias: 2610029K21Rik|Gpatc4
Full Name: G patch domain containing 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 12394 bases
Position: chr3:86222119-86234512
Accession: 1913864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0060674	G-patch	PF01585.23	2.1e-09	1	1
MGP_SPRETEiJ_P0060671	G-patch	PF01585.23	3.5e-09	1	1
MGP_SPRETEiJ_P0060672	G-patch	PF01585.23	3.5e-09	1	1
MGP_SPRETEiJ_P0060675	G-patch	PF01585.23	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0060671	-	1730	-	MGP_SPRETEiJ_P0060671	417 (aa)	-	-
MGP_SPRETEiJ_T0060672	-	1593	-	MGP_SPRETEiJ_P0060672	417 (aa)	-	-
MGP_SPRETEiJ_T0060673	-	741	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0060674	-	958	-	MGP_SPRETEiJ_P0060674	239 (aa)	-	-
MGP_SPRETEiJ_T0060675	-	2251	-	MGP_SPRETEiJ_P0060675	417 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026093	Gpatch4	78	83.957	ENSG00000160818	GPATCH4	95	85.841	Homo_sapiens
MGP_SPRETEiJ_G0026093	Gpatch4	87	43.694	ENSAPOG00000008436	gpatch4	51	47.030	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026093	Gpatch4	78	85.561	ENSAMEG00000014829	GPATCH4	51	80.734	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026093	Gpatch4	51	47.581	ENSACIG00000017309	-	63	59.740	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026093	Gpatch4	87	43.111	ENSAOCG00000015494	gpatch4	54	44.186	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026093	Gpatch4	90	42.241	ENSAPEG00000022243	gpatch4	54	44.186	Amphiprion_percula
MGP_SPRETEiJ_G0026093	Gpatch4	84	45.413	ENSATEG00000006359	gpatch4	50	46.330	Anabas_testudineus
MGP_SPRETEiJ_G0026093	Gpatch4	78	84.492	ENSANAG00000035354	GPATCH4	91	62.018	Aotus_nancymaae
MGP_SPRETEiJ_G0026093	Gpatch4	86	39.764	ENSACLG00000010456	gpatch4	58	52.525	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	ENSBTAG00000000406	GPATCH4	87	61.433	Bos_taurus
MGP_SPRETEiJ_G0026093	Gpatch4	51	81.818	ENSCJAG00000031662	-	84	81.818	Callithrix_jacchus
MGP_SPRETEiJ_G0026093	Gpatch4	82	81.218	ENSCJAG00000006048	GPATCH4	92	84.821	Callithrix_jacchus
MGP_SPRETEiJ_G0026093	Gpatch4	82	82.564	ENSCAFG00000016788	GPATCH4	68	67.247	Canis_familiaris
MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	ENSCHIG00000021295	GPATCH4	87	61.050	Capra_hircus
MGP_SPRETEiJ_G0026093	Gpatch4	97	76.923	ENSCCAG00000036114	GPATCH4	92	84.821	Cebus_capucinus
MGP_SPRETEiJ_G0026093	Gpatch4	95	78.070	ENSCATG00000042152	GPATCH4	82	82.051	Cercocebus_atys
MGP_SPRETEiJ_G0026093	Gpatch4	99	78.243	ENSCLAG00000002967	-	56	78.333	Chinchilla_lanigera
MGP_SPRETEiJ_G0026093	Gpatch4	84	81.000	ENSCSAG00000002161	GPATCH4	94	59.762	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026093	Gpatch4	77	51.531	ENSCPBG00000025803	GPATCH4	64	52.041	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026093	Gpatch4	69	41.954	ENSCING00000004717	-	94	36.402	Ciona_intestinalis
MGP_SPRETEiJ_G0026093	Gpatch4	67	42.515	ENSCSAVG00000003297	-	97	35.714	Ciona_savignyi
MGP_SPRETEiJ_G0026093	Gpatch4	95	77.632	ENSCANG00000030031	GPATCH4	82	82.906	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026093	Gpatch4	99	89.496	ENSCGRG00001016898	Gpatch4	97	77.000	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026093	Gpatch4	99	89.496	ENSCGRG00000008399	Gpatch4	97	77.000	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026093	Gpatch4	80	43.939	ENSCSEG00000012030	gpatch4	96	34.535	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026093	Gpatch4	77	45.771	ENSDARG00000091931	gpatch4	69	47.727	Danio_rerio
MGP_SPRETEiJ_G0026093	Gpatch4	99	77.119	ENSDNOG00000034673	GPATCH4	68	69.032	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026093	Gpatch4	73	39.487	FBgn0039829	CG15561	54	39.487	Drosophila_melanogaster
MGP_SPRETEiJ_G0026093	Gpatch4	65	44.048	ENSEBUG00000006498	-	55	44.118	Eptatretus_burgeri
MGP_SPRETEiJ_G0026093	Gpatch4	99	78.992	ENSEASG00005018284	GPATCH4	89	62.532	Equus_asinus_asinus
MGP_SPRETEiJ_G0026093	Gpatch4	84	82.000	ENSECAG00000011135	GPATCH4	95	67.365	Equus_caballus
MGP_SPRETEiJ_G0026093	Gpatch4	82	79.592	ENSEEUG00000003221	-	53	76.818	Erinaceus_europaeus
MGP_SPRETEiJ_G0026093	Gpatch4	90	79.535	ENSFCAG00000006554	GPATCH4	59	78.140	Felis_catus
MGP_SPRETEiJ_G0026093	Gpatch4	95	41.224	ENSFHEG00000003097	gpatch4	56	45.581	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026093	Gpatch4	81	43.689	ENSGALG00000048365	GPATCH4	56	44.390	Gallus_gallus
MGP_SPRETEiJ_G0026093	Gpatch4	84	43.062	ENSGAFG00000021732	gpatch4	69	43.062	Gambusia_affinis
MGP_SPRETEiJ_G0026093	Gpatch4	77	47.500	ENSGACG00000013318	gpatch4	60	48.500	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026093	Gpatch4	77	51.531	ENSGAGG00000020710	GPATCH4	64	52.041	Gopherus_agassizii
MGP_SPRETEiJ_G0026093	Gpatch4	80	82.723	ENSGGOG00000000753	GPATCH4	82	82.906	Gorilla_gorilla
MGP_SPRETEiJ_G0026093	Gpatch4	82	44.811	ENSHBUG00000009675	gpatch4	97	34.750	Haplochromis_burtoni
MGP_SPRETEiJ_G0026093	Gpatch4	77	45.078	ENSHCOG00000007016	gpatch4	73	40.873	Hippocampus_comes
MGP_SPRETEiJ_G0026093	Gpatch4	85	46.544	ENSIPUG00000006348	gpatch4	100	36.770	Ictalurus_punctatus
MGP_SPRETEiJ_G0026093	Gpatch4	99	72.458	ENSSTOG00000020510	GPATCH4	89	82.051	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026093	Gpatch4	84	44.843	ENSKMAG00000015765	gpatch4	59	45.291	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026093	Gpatch4	83	44.292	ENSLBEG00000009364	-	65	45.581	Labrus_bergylta
MGP_SPRETEiJ_G0026093	Gpatch4	82	48.792	ENSLACG00000009700	GPATCH4	60	48.792	Latimeria_chalumnae
MGP_SPRETEiJ_G0026093	Gpatch4	81	43.662	ENSLOCG00000008820	gpatch4	61	44.131	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026093	Gpatch4	99	59.244	ENSLAFG00000028327	-	84	51.923	Loxodonta_africana
MGP_SPRETEiJ_G0026093	Gpatch4	80	81.152	ENSMFAG00000030965	GPATCH4	82	82.051	Macaca_fascicularis
MGP_SPRETEiJ_G0026093	Gpatch4	84	80.500	ENSMMUG00000002624	GPATCH4	82	82.906	Macaca_mulatta
MGP_SPRETEiJ_G0026093	Gpatch4	82	80.000	ENSMNEG00000028844	GPATCH4	82	82.051	Macaca_nemestrina
MGP_SPRETEiJ_G0026093	Gpatch4	93	77.578	ENSMLEG00000037909	GPATCH4	82	81.197	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026093	Gpatch4	92	38.750	ENSMZEG00005017452	gpatch4	55	44.601	Maylandia_zebra
MGP_SPRETEiJ_G0026093	Gpatch4	92	57.727	ENSMICG00000038615	-	95	62.698	Microcebus_murinus
MGP_SPRETEiJ_G0026093	Gpatch4	97	75.536	ENSMICG00000013624	GPATCH4	92	65.706	Microcebus_murinus
MGP_SPRETEiJ_G0026093	Gpatch4	68	71.605	ENSMICG00000034025	-	93	74.775	Microcebus_murinus
MGP_SPRETEiJ_G0026093	Gpatch4	85	44.796	ENSMMOG00000017095	gpatch4	96	50.467	Mola_mola
MGP_SPRETEiJ_G0026093	Gpatch4	99	59.336	ENSMODG00000016818	-	84	59.336	Monodelphis_domestica
MGP_SPRETEiJ_G0026093	Gpatch4	78	60.847	ENSMODG00000014154	-	93	60.847	Monodelphis_domestica
MGP_SPRETEiJ_G0026093	Gpatch4	90	43.348	ENSMALG00000003793	gpatch4	50	45.933	Monopterus_albus
MGP_SPRETEiJ_G0026093	Gpatch4	99	95.798	MGP_CAROLIEiJ_G0025152	Gpatch4	99	95.798	Mus_caroli
MGP_SPRETEiJ_G0026093	Gpatch4	100	99.582	ENSMUSG00000028069	Gpatch4	100	99.582	Mus_musculus
MGP_SPRETEiJ_G0026093	Gpatch4	99	96.218	MGP_PahariEiJ_G0026595	-	99	96.218	Mus_pahari
MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	ENSMPUG00000004136	-	53	76.339	Mustela_putorius_furo
MGP_SPRETEiJ_G0026093	Gpatch4	85	80.198	ENSMLUG00000009571	GPATCH4	69	65.798	Myotis_lucifugus
MGP_SPRETEiJ_G0026093	Gpatch4	51	77.049	ENSNGAG00000019958	-	92	77.049	Nannospalax_galili
MGP_SPRETEiJ_G0026093	Gpatch4	93	77.130	ENSNLEG00000027678	GPATCH4	89	63.284	Nomascus_leucogenys
MGP_SPRETEiJ_G0026093	Gpatch4	83	58.291	ENSMEUG00000006861	-	73	58.291	Notamacropus_eugenii
MGP_SPRETEiJ_G0026093	Gpatch4	82	79.592	ENSOPRG00000000586	GPATCH4	55	72.500	Ochotona_princeps
MGP_SPRETEiJ_G0026093	Gpatch4	77	45.771	ENSONIG00000002261	gpatch4	51	46.766	Oreochromis_niloticus
MGP_SPRETEiJ_G0026093	Gpatch4	80	81.250	ENSOCUG00000025781	-	70	64.744	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026093	Gpatch4	82	43.721	ENSORLG00020013892	gpatch4	59	44.393	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026093	Gpatch4	85	41.704	ENSORLG00015019725	gpatch4	60	44.393	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026093	Gpatch4	95	36.797	ENSOMEG00000000529	gpatch4	53	39.796	Oryzias_melastigma
MGP_SPRETEiJ_G0026093	Gpatch4	82	83.673	ENSOGAG00000006698	-	81	66.477	Otolemur_garnettii
MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	ENSOARG00000006123	GPATCH4	87	61.433	Ovis_aries
MGP_SPRETEiJ_G0026093	Gpatch4	76	84.615	ENSPPAG00000028364	-	82	82.906	Pan_paniscus
MGP_SPRETEiJ_G0026093	Gpatch4	90	79.070	ENSPPRG00000002106	GPATCH4	59	77.674	Panthera_pardus
MGP_SPRETEiJ_G0026093	Gpatch4	92	79.545	ENSPTIG00000006717	GPATCH4	79	85.586	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026093	Gpatch4	76	84.615	ENSPTRG00000001464	GPATCH4	82	82.906	Pan_troglodytes
MGP_SPRETEiJ_G0026093	Gpatch4	93	78.475	ENSPANG00000018543	GPATCH4	82	82.906	Papio_anubis
MGP_SPRETEiJ_G0026093	Gpatch4	84	52.632	ENSPSIG00000011317	GPATCH4	74	50.467	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026093	Gpatch4	85	42.152	ENSPMAG00000009175	gpatch4	67	45.918	Petromyzon_marinus
MGP_SPRETEiJ_G0026093	Gpatch4	84	43.119	ENSPFOG00000011835	gpatch4	56	43.119	Poecilia_formosa
MGP_SPRETEiJ_G0026093	Gpatch4	84	42.661	ENSPLAG00000019504	gpatch4	56	42.661	Poecilia_latipinna
MGP_SPRETEiJ_G0026093	Gpatch4	84	43.119	ENSPMEG00000001375	gpatch4	57	43.119	Poecilia_mexicana
MGP_SPRETEiJ_G0026093	Gpatch4	84	41.284	ENSPREG00000017029	gpatch4	59	42.202	Poecilia_reticulata
MGP_SPRETEiJ_G0026093	Gpatch4	95	78.070	ENSPPYG00000000711	-	78	62.464	Pongo_abelii
MGP_SPRETEiJ_G0026093	Gpatch4	66	82.166	ENSPCOG00000023130	-	76	84.821	Propithecus_coquereli
MGP_SPRETEiJ_G0026093	Gpatch4	67	74.534	ENSPCOG00000013948	-	89	73.810	Propithecus_coquereli
MGP_SPRETEiJ_G0026093	Gpatch4	86	39.764	ENSPNYG00000018461	gpatch4	54	45.755	Pundamilia_nyererei
MGP_SPRETEiJ_G0026093	Gpatch4	99	93.697	ENSRNOG00000018969	Gpatch4	97	86.650	Rattus_norvegicus
MGP_SPRETEiJ_G0026093	Gpatch4	95	78.509	ENSRBIG00000005742	GPATCH4	82	82.051	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026093	Gpatch4	95	78.509	ENSRROG00000044157	GPATCH4	82	82.051	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026093	Gpatch4	85	82.178	ENSSBOG00000024840	GPATCH4	95	56.542	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026093	Gpatch4	93	59.111	ENSSHAG00000015436	-	85	57.261	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026093	Gpatch4	93	40.239	ENSSMAG00000016329	gpatch4	54	43.333	Scophthalmus_maximus
MGP_SPRETEiJ_G0026093	Gpatch4	77	44.608	ENSSDUG00000006583	gpatch4	53	46.119	Seriola_dumerili
MGP_SPRETEiJ_G0026093	Gpatch4	77	44.608	ENSSLDG00000012365	gpatch4	53	46.119	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026093	Gpatch4	67	64.375	ENSSARG00000008606	-	73	50.820	Sorex_araneus
MGP_SPRETEiJ_G0026093	Gpatch4	78	51.269	ENSSPUG00000002674	GPATCH4	66	51.777	Sphenodon_punctatus
MGP_SPRETEiJ_G0026093	Gpatch4	87	41.850	ENSSPAG00000011683	gpatch4	51	44.390	Stegastes_partitus
MGP_SPRETEiJ_G0026093	Gpatch4	82	82.564	ENSSSCG00000006481	GPATCH4	79	64.205	Sus_scrofa
MGP_SPRETEiJ_G0026093	Gpatch4	75	44.828	ENSTNIG00000005156	gpatch4	69	46.000	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0026093	Gpatch4	78	83.422	ENSTTRG00000001113	GPATCH4	86	64.553	Tursiops_truncatus
MGP_SPRETEiJ_G0026093	Gpatch4	78	85.027	ENSUAMG00000013407	GPATCH4	98	54.503	Ursus_americanus
MGP_SPRETEiJ_G0026093	Gpatch4	78	85.027	ENSUMAG00000017797	GPATCH4	50	80.275	Ursus_maritimus
MGP_SPRETEiJ_G0026093	Gpatch4	82	71.875	ENSVVUG00000006004	-	84	82.301	Vulpes_vulpes
MGP_SPRETEiJ_G0026093	Gpatch4	77	46.734	ENSXETG00000020397	gpatch4	98	35.647	Xenopus_tropicalis
MGP_SPRETEiJ_G0026093	Gpatch4	92	41.453	ENSXCOG00000003911	gpatch4	57	43.458	Xiphophorus_couchianus
MGP_SPRETEiJ_G0026093	Gpatch4	92	40.756	ENSXMAG00000024520	gpatch4	57	42.661	Xiphophorus_maculatus