EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026296 (Gene tree)
Gene ID: -
Gene Symbol: Tars2
Alias: 2610024N01Rik|Tarsl1
Full Name: threonyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 20235 bases
Position: chr3:93601911-93622145
Accession: 1919057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0061601	tRNA_SAD	PF07973.14	1.3e-10	1	1
MGP_SPRETEiJ_P0061597	tRNA_SAD	PF07973.14	2e-10	1	1
MGP_SPRETEiJ_P0061594	tRNA_SAD	PF07973.14	4.2e-10	1	1
MGP_SPRETEiJ_P0061590	tRNA_SAD	PF07973.14	4.5e-10	1	1
MGP_SPRETEiJ_P0061592	tRNA_SAD	PF07973.14	5e-10	1	1
MGP_SPRETEiJ_P0061599	tRNA_SAD	PF07973.14	5.8e-09	1	1
MGP_SPRETEiJ_P0061600	tRNA_SAD	PF07973.14	8.2e-09	1	1
MGP_SPRETEiJ_P0061592	HGTP_anticodon	PF03129.20	3.7e-17	1	1
MGP_SPRETEiJ_P0061594	HGTP_anticodon	PF03129.20	3.9e-17	1	1
MGP_SPRETEiJ_P0061590	HGTP_anticodon	PF03129.20	4.3e-17	1	1
MGP_SPRETEiJ_P0061592	tRNA-synt_2b	PF00587.25	2.4e-31	1	1
MGP_SPRETEiJ_P0061590	tRNA-synt_2b	PF00587.25	2.5e-31	1	1
MGP_SPRETEiJ_P0061594	tRNA-synt_2b	PF00587.25	2.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0061592	-	2157	-	MGP_SPRETEiJ_P0061592	642 (aa)	-	-
MGP_SPRETEiJ_T0061593	-	1981	-	MGP_SPRETEiJ_P0061593	264 (aa)	-	UPI000620AB47
MGP_SPRETEiJ_T0061590	-	2707	-	MGP_SPRETEiJ_P0061590	723 (aa)	-	-
MGP_SPRETEiJ_T0061591	-	3651	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061596	-	577	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061597	-	3232	-	MGP_SPRETEiJ_P0061597	423 (aa)	-	-
MGP_SPRETEiJ_T0061594	-	2313	-	MGP_SPRETEiJ_P0061594	697 (aa)	-	-
MGP_SPRETEiJ_T0061595	-	2037	-	MGP_SPRETEiJ_P0061595	177 (aa)	-	-
MGP_SPRETEiJ_T0061598	-	643	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061599	-	623	-	MGP_SPRETEiJ_P0061599	104 (aa)	-	-
MGP_SPRETEiJ_T0061600	-	946	-	MGP_SPRETEiJ_P0061600	142 (aa)	-	-
MGP_SPRETEiJ_T0061602	-	636	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061603	-	457	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061601	-	661	-	MGP_SPRETEiJ_P0061601	209 (aa)	-	-
MGP_SPRETEiJ_T0061605	-	714	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061606	-	732	-	MGP_SPRETEiJ_P0061606	79 (aa)	-	UPI000620AB82
MGP_SPRETEiJ_T0061604	-	787	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061607	-	625	-	MGP_SPRETEiJ_P0061607	11 (aa)	-	UPI000620AA78

Gene Model

Click here to download MGP_SPRETEiJ_G0026296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0026296	Tars2	99	60.000	MGP_SPRETEiJ_G0020571	Tars	93	54.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSG00000143374	TARS2	100	83.541	Homo_sapiens
MGP_SPRETEiJ_G0026296	Tars2	100	85.236	ENSAMEG00000001547	TARS2	100	83.817	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026296	Tars2	99	89.286	ENSANAG00000019620	TARS2	100	83.541	Aotus_nancymaae
MGP_SPRETEiJ_G0026296	Tars2	100	85.211	ENSBTAG00000003799	TARS2	100	82.711	Bos_taurus
MGP_SPRETEiJ_G0026296	Tars2	99	89.286	ENSCJAG00000006429	TARS2	100	83.202	Callithrix_jacchus
MGP_SPRETEiJ_G0026296	Tars2	100	88.000	ENSCAFG00000011941	TARS2	100	82.019	Canis_familiaris
MGP_SPRETEiJ_G0026296	Tars2	100	88.000	ENSCAFG00020019615	TARS2	100	82.019	Canis_lupus_dingo
MGP_SPRETEiJ_G0026296	Tars2	100	85.211	ENSCHIG00000018559	TARS2	100	82.434	Capra_hircus
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSTSYG00000003903	TARS2	100	84.371	Carlito_syrichta
MGP_SPRETEiJ_G0026296	Tars2	79	80.357	ENSCAPG00000004123	-	100	80.973	Cavia_aperea
MGP_SPRETEiJ_G0026296	Tars2	99	84.397	ENSCPOG00000010586	-	100	82.069	Cavia_porcellus
MGP_SPRETEiJ_G0026296	Tars2	99	90.000	ENSCCAG00000034305	TARS2	100	82.988	Cebus_capucinus
MGP_SPRETEiJ_G0026296	Tars2	99	83.571	ENSCATG00000034784	TARS2	100	83.684	Cercocebus_atys
MGP_SPRETEiJ_G0026296	Tars2	99	85.816	ENSCLAG00000017274	TARS2	100	84.843	Chinchilla_lanigera
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSCSAG00000018075	TARS2	100	83.956	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026296	Tars2	94	79.839	ENSCHOG00000000796	-	81	79.839	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSCANG00000035036	TARS2	98	85.174	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026296	Tars2	100	93.662	ENSCGRG00001023517	Tars2	100	92.534	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026296	Tars2	100	93.662	ENSCGRG00000007836	Tars2	100	92.534	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026296	Tars2	99	89.041	ENSDNOG00000005934	TARS2	100	82.296	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026296	Tars2	100	87.324	ENSDORG00000007569	Tars2	100	87.324	Dipodomys_ordii
MGP_SPRETEiJ_G0026296	Tars2	100	89.333	ENSETEG00000008569	TARS2	100	76.072	Echinops_telfairi
MGP_SPRETEiJ_G0026296	Tars2	100	88.028	ENSEASG00005001587	TARS2	100	83.402	Equus_asinus_asinus
MGP_SPRETEiJ_G0026296	Tars2	100	88.028	ENSECAG00000014276	TARS2	100	83.541	Equus_caballus
MGP_SPRETEiJ_G0026296	Tars2	100	83.803	ENSEEUG00000012661	-	72	88.462	Erinaceus_europaeus
MGP_SPRETEiJ_G0026296	Tars2	87	91.489	ENSEEUG00000000186	-	70	91.489	Erinaceus_europaeus
MGP_SPRETEiJ_G0026296	Tars2	100	86.667	ENSFCAG00000001702	TARS2	100	84.073	Felis_catus
MGP_SPRETEiJ_G0026296	Tars2	99	85.714	ENSFDAG00000012739	TARS2	99	83.629	Fukomys_damarensis
MGP_SPRETEiJ_G0026296	Tars2	99	90.000	ENSGGOG00000006311	TARS2	100	84.805	Gorilla_gorilla
MGP_SPRETEiJ_G0026296	Tars2	99	83.571	ENSHGLG00000009219	TARS2	100	82.540	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026296	Tars2	99	83.571	ENSHGLG00100008254	TARS2	100	79.448	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026296	Tars2	100	90.141	ENSSTOG00000008311	TARS2	100	87.205	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026296	Tars2	99	88.571	ENSJJAG00000021883	Tars2	100	86.811	Jaculus_jaculus
MGP_SPRETEiJ_G0026296	Tars2	100	88.028	ENSLAFG00000004979	TARS2	100	81.906	Loxodonta_africana
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSMFAG00000030387	TARS2	100	83.541	Macaca_fascicularis
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSMMUG00000006256	TARS2	100	83.541	Macaca_mulatta
MGP_SPRETEiJ_G0026296	Tars2	85	90.909	ENSMNEG00000042066	TARS2	96	73.247	Macaca_nemestrina
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSMLEG00000030174	TARS2	100	83.126	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026296	Tars2	99	61.429	ENSMGAG00000000718	TARS2	100	60.781	Meleagris_gallopavo
MGP_SPRETEiJ_G0026296	Tars2	100	91.142	ENSMAUG00000008184	Tars2	100	90.963	Mesocricetus_auratus
MGP_SPRETEiJ_G0026296	Tars2	99	92.143	ENSMICG00000008016	TARS2	100	79.505	Microcebus_murinus
MGP_SPRETEiJ_G0026296	Tars2	100	94.366	ENSMOCG00000018432	Tars2	100	92.913	Microtus_ochrogaster
MGP_SPRETEiJ_G0026296	Tars2	99	79.577	ENSMODG00000018792	TARS2	99	73.232	Monodelphis_domestica
MGP_SPRETEiJ_G0026296	Tars2	100	99.621	MGP_CAROLIEiJ_G0025352	Tars2	100	99.621	Mus_caroli
MGP_SPRETEiJ_G0026296	Tars2	100	100.000	ENSMUSG00000028107	Tars2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0026296	Tars2	100	98.077	MGP_PahariEiJ_G0026796	Tars2	100	99.254	Mus_pahari
MGP_SPRETEiJ_G0026296	Tars2	99	88.889	ENSMPUG00000004795	TARS2	100	84.371	Mustela_putorius_furo
MGP_SPRETEiJ_G0026296	Tars2	99	89.041	ENSMLUG00000013123	TARS2	100	82.434	Myotis_lucifugus
MGP_SPRETEiJ_G0026296	Tars2	100	89.437	ENSNGAG00000024279	-	100	89.437	Nannospalax_galili
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSNLEG00000009858	TARS2	100	83.817	Nomascus_leucogenys
MGP_SPRETEiJ_G0026296	Tars2	99	80.282	ENSMEUG00000014226	TARS2	92	78.585	Notamacropus_eugenii
MGP_SPRETEiJ_G0026296	Tars2	98	84.130	ENSOPRG00000010194	TARS2	88	84.130	Ochotona_princeps
MGP_SPRETEiJ_G0026296	Tars2	99	88.652	ENSODEG00000011883	TARS2	100	84.449	Octodon_degus
MGP_SPRETEiJ_G0026296	Tars2	95	81.481	ENSOGAG00000005360	TARS2	100	72.453	Otolemur_garnettii
MGP_SPRETEiJ_G0026296	Tars2	100	86.620	ENSOARG00000020814	TARS2	100	83.149	Ovis_aries
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSPPAG00000042011	TARS2	100	83.402	Pan_paniscus
MGP_SPRETEiJ_G0026296	Tars2	100	86.667	ENSPPRG00000019975	TARS2	100	83.551	Panthera_pardus
MGP_SPRETEiJ_G0026296	Tars2	100	86.667	ENSPTIG00000008079	TARS2	98	92.308	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSPTRG00000001256	TARS2	100	83.541	Pan_troglodytes
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSPANG00000016774	TARS2	100	83.126	Papio_anubis
MGP_SPRETEiJ_G0026296	Tars2	100	94.366	ENSPEMG00000014203	-	100	94.366	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026296	Tars2	99	80.282	ENSPCIG00000008884	TARS2	98	75.603	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026296	Tars2	99	90.714	ENSPPYG00000000898	TARS2	100	83.956	Pongo_abelii
MGP_SPRETEiJ_G0026296	Tars2	99	80.822	ENSPCAG00000016619	TARS2	100	68.593	Procavia_capensis
MGP_SPRETEiJ_G0026296	Tars2	99	89.286	ENSPCOG00000017247	TARS2	100	86.423	Propithecus_coquereli
MGP_SPRETEiJ_G0026296	Tars2	99	85.714	ENSPVAG00000004340	TARS2	100	77.178	Pteropus_vampyrus
MGP_SPRETEiJ_G0026296	Tars2	100	95.070	ENSRNOG00000057194	Tars2	100	93.914	Rattus_norvegicus
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSRBIG00000044518	TARS2	99	85.802	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSRROG00000030946	TARS2	100	83.679	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026296	Tars2	99	89.286	ENSSBOG00000001108	TARS2	100	81.723	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026296	Tars2	99	80.986	ENSSHAG00000010286	TARS2	100	76.814	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026296	Tars2	99	82.143	ENSSARG00000013133	TARS2	100	76.731	Sorex_araneus
MGP_SPRETEiJ_G0026296	Tars2	100	87.324	ENSSSCG00000026395	TARS2	99	84.273	Sus_scrofa
MGP_SPRETEiJ_G0026296	Tars2	99	91.429	ENSTBEG00000003968	TARS2	82	79.167	Tupaia_belangeri
MGP_SPRETEiJ_G0026296	Tars2	66	86.243	ENSTTRG00000010627	TARS2	80	86.243	Tursiops_truncatus
MGP_SPRETEiJ_G0026296	Tars2	97	81.712	ENSUAMG00000023983	TARS2	96	84.286	Ursus_americanus
MGP_SPRETEiJ_G0026296	Tars2	99	87.500	ENSUMAG00000003705	TARS2	100	84.094	Ursus_maritimus
MGP_SPRETEiJ_G0026296	Tars2	89	80.508	ENSVPAG00000005427	TARS2	74	84.091	Vicugna_pacos
MGP_SPRETEiJ_G0026296	Tars2	100	88.000	ENSVVUG00000009226	TARS2	100	82.434	Vulpes_vulpes