EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026377 (Gene tree)
Gene ID: -
Gene Symbol: Ttf2
Alias: 4632434F22Rik
Full Name: transcription termination factor%2C RNA polymerase II
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 32057 bases
Position: chr3:98868715-98900771
Accession: 1921294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0061889	ResIII	PF04851.15	1.6e-09	1	1
MGP_SPRETEiJ_P0061889	DEAD	PF00270.29	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0061893	-	1241	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061892	-	561	-	MGP_SPRETEiJ_P0061892	186 (aa)	-	-
MGP_SPRETEiJ_T0061891	-	4533	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061890	-	745	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0061889	-	4581	-	MGP_SPRETEiJ_P0061889	1139 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026377	Ttf2	100	70.497	ENSG00000116830	TTF2	100	91.608	Homo_sapiens
MGP_SPRETEiJ_G0026377	Ttf2	68	63.151	ENSAPLG00000010324	-	100	52.342	Anas_platyrhynchos
MGP_SPRETEiJ_G0026377	Ttf2	100	70.719	ENSANAG00000020654	TTF2	100	70.976	Aotus_nancymaae
MGP_SPRETEiJ_G0026377	Ttf2	100	69.152	ENSBTAG00000015392	TTF2	100	69.152	Bos_taurus
MGP_SPRETEiJ_G0026377	Ttf2	100	67.878	ENSCHIG00000020785	TTF2	98	67.878	Capra_hircus
MGP_SPRETEiJ_G0026377	Ttf2	100	69.863	ENSCCAG00000032675	TTF2	100	70.462	Cebus_capucinus
MGP_SPRETEiJ_G0026377	Ttf2	65	37.230	ENSCSAVG00000002857	-	100	37.230	Ciona_savignyi
MGP_SPRETEiJ_G0026377	Ttf2	100	71.086	ENSCANG00000032079	TTF2	100	71.086	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026377	Ttf2	100	64.535	ENSDORG00000013781	Ttf2	100	64.621	Dipodomys_ordii
MGP_SPRETEiJ_G0026377	Ttf2	64	38.138	FBgn0002542	lds	70	38.138	Drosophila_melanogaster
MGP_SPRETEiJ_G0026377	Ttf2	100	70.205	ENSECAG00000012474	TTF2	100	77.222	Equus_caballus
MGP_SPRETEiJ_G0026377	Ttf2	100	64.389	ENSFCAG00000001981	TTF2	100	64.902	Felis_catus
MGP_SPRETEiJ_G0026377	Ttf2	85	47.471	ENSGALG00000015249	-	99	47.578	Gallus_gallus
MGP_SPRETEiJ_G0026377	Ttf2	68	57.722	ENSGAFG00000004358	TTF2	99	49.008	Gambusia_affinis
MGP_SPRETEiJ_G0026377	Ttf2	100	70.583	ENSGGOG00000015790	TTF2	100	70.755	Gorilla_gorilla
MGP_SPRETEiJ_G0026377	Ttf2	100	73.537	ENSJJAG00000015225	Ttf2	100	73.537	Jaculus_jaculus
MGP_SPRETEiJ_G0026377	Ttf2	100	69.461	ENSMNEG00000042285	TTF2	100	69.461	Macaca_nemestrina
MGP_SPRETEiJ_G0026377	Ttf2	100	71.086	ENSMLEG00000041549	TTF2	100	71.086	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026377	Ttf2	100	52.325	ENSMGAG00000014354	TTF2	100	52.325	Meleagris_gallopavo
MGP_SPRETEiJ_G0026377	Ttf2	99	80.265	ENSMOCG00000008415	Ttf2	99	80.354	Microtus_ochrogaster
MGP_SPRETEiJ_G0026377	Ttf2	100	58.748	ENSMODG00000005145	TTF2	98	58.834	Monodelphis_domestica
MGP_SPRETEiJ_G0026377	Ttf2	78	58.235	ENSMALG00000017262	TTF2	85	58.762	Monopterus_albus
MGP_SPRETEiJ_G0026377	Ttf2	100	96.842	MGP_CAROLIEiJ_G0025427	Ttf2	100	96.842	Mus_caroli
MGP_SPRETEiJ_G0026377	Ttf2	100	98.595	ENSMUSG00000033222	Ttf2	100	98.595	Mus_musculus
MGP_SPRETEiJ_G0026377	Ttf2	100	93.293	MGP_PahariEiJ_G0026871	Ttf2	100	93.293	Mus_pahari
MGP_SPRETEiJ_G0026377	Ttf2	100	69.547	ENSMLUG00000013908	TTF2	100	69.666	Myotis_lucifugus
MGP_SPRETEiJ_G0026377	Ttf2	100	76.862	ENSNGAG00000018882	Ttf2	100	76.862	Nannospalax_galili
MGP_SPRETEiJ_G0026377	Ttf2	63	57.143	ENSNBRG00000011914	TTF2	64	57.692	Neolamprologus_brichardi
MGP_SPRETEiJ_G0026377	Ttf2	100	71.269	ENSNLEG00000005209	TTF2	100	71.441	Nomascus_leucogenys
MGP_SPRETEiJ_G0026377	Ttf2	100	70.249	ENSOCUG00000000613	TTF2	100	70.249	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026377	Ttf2	100	68.638	ENSOGAG00000009039	TTF2	100	68.868	Otolemur_garnettii
MGP_SPRETEiJ_G0026377	Ttf2	100	67.775	ENSOARG00000020266	TTF2	100	67.690	Ovis_aries
MGP_SPRETEiJ_G0026377	Ttf2	100	70.634	ENSPPAG00000027542	TTF2	100	70.805	Pan_paniscus
MGP_SPRETEiJ_G0026377	Ttf2	100	70.719	ENSPTRG00000001162	TTF2	100	70.890	Pan_troglodytes
MGP_SPRETEiJ_G0026377	Ttf2	66	64.623	ENSPSIG00000005266	TTF2	98	64.623	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026377	Ttf2	85	55.920	ENSPCIG00000003483	TTF2	90	55.920	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026377	Ttf2	100	68.268	ENSPPYG00000000976	TTF2	100	68.439	Pongo_abelii
MGP_SPRETEiJ_G0026377	Ttf2	100	69.606	ENSPCOG00000000551	TTF2	100	70.034	Propithecus_coquereli
MGP_SPRETEiJ_G0026377	Ttf2	100	67.329	ENSPVAG00000014881	TTF2	100	67.329	Pteropus_vampyrus
MGP_SPRETEiJ_G0026377	Ttf2	100	70.723	ENSRBIG00000042651	TTF2	100	70.723	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026377	Ttf2	100	70.976	ENSRROG00000013287	TTF2	100	70.976	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026377	Ttf2	100	69.803	ENSSBOG00000022555	TTF2	100	70.094	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026377	Ttf2	100	59.281	ENSSHAG00000018195	TTF2	100	59.281	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026377	Ttf2	67	59.566	ENSSMAG00000007532	TTF2	100	49.660	Scophthalmus_maximus
MGP_SPRETEiJ_G0026377	Ttf2	67	57.107	ENSSDUG00000013617	TTF2	99	47.639	Seriola_dumerili
MGP_SPRETEiJ_G0026377	Ttf2	100	59.673	ENSSARG00000007562	TTF2	100	60.103	Sorex_araneus
MGP_SPRETEiJ_G0026377	Ttf2	100	68.862	ENSSSCG00000006733	TTF2	100	68.915	Sus_scrofa
MGP_SPRETEiJ_G0026377	Ttf2	72	54.220	ENSTRUG00000015592	-	77	54.220	Takifugu_rubripes
MGP_SPRETEiJ_G0026377	Ttf2	68	57.572	ENSTNIG00000015679	-	99	49.787	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0026377	Ttf2	100	65.981	ENSTTRG00000012884	TTF2	100	66.238	Tursiops_truncatus
MGP_SPRETEiJ_G0026377	Ttf2	91	59.419	ENSVPAG00000008276	TTF2	97	59.850	Vicugna_pacos
MGP_SPRETEiJ_G0026377	Ttf2	74	44.270	ENSXETG00000022003	-	100	44.270	Xenopus_tropicalis