EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026423 (Gene tree)
Gene ID: -
Gene Symbol: Ddx20
Alias: GEMIN3|dp103
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 9062 bases
Position: chr3:103780559-103789620
Accession: 1858415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0062123	ResIII	PF04851.15	3.4e-06	1	1
MGP_SPRETEiJ_P0062123	DEAD	PF00270.29	6.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0062124	-	1264	-	MGP_SPRETEiJ_P0062124	139 (aa)	-	-
MGP_SPRETEiJ_T0062125	-	2262	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0062123	-	2905	-	MGP_SPRETEiJ_P0062123	825 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0026423	Ddx20	50	34.450	MGP_SPRETEiJ_G0032396	Ddx39	92	34.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026423	Ddx20	99	83.010	ENSG00000064703	DDX20	99	83.190	Homo_sapiens
MGP_SPRETEiJ_G0026423	Ddx20	95	50.420	ENSAPOG00000017383	DDX20	71	60.755	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026423	Ddx20	98	83.026	ENSAMEG00000005344	DDX20	99	82.945	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026423	Ddx20	72	62.248	ENSACIG00000013095	ddx20	71	62.248	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026423	Ddx20	95	50.831	ENSAOCG00000013474	DDX20	98	51.020	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026423	Ddx20	95	51.322	ENSAPEG00000006690	ddx20	71	61.905	Amphiprion_percula
MGP_SPRETEiJ_G0026423	Ddx20	95	50.299	ENSATEG00000002941	ddx20	72	61.450	Anabas_testudineus
MGP_SPRETEiJ_G0026423	Ddx20	89	50.134	ENSAPLG00000013826	DDX20	99	49.866	Anas_platyrhynchos
MGP_SPRETEiJ_G0026423	Ddx20	93	58.892	ENSACAG00000006235	DDX20	98	58.044	Anolis_carolinensis
MGP_SPRETEiJ_G0026423	Ddx20	98	83.149	ENSANAG00000037881	DDX20	99	83.067	Aotus_nancymaae
MGP_SPRETEiJ_G0026423	Ddx20	73	61.039	ENSACLG00000009485	ddx20	99	50.962	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026423	Ddx20	77	58.385	ENSAMXG00000040738	ddx20	81	60.065	Astyanax_mexicanus
MGP_SPRETEiJ_G0026423	Ddx20	99	83.109	ENSBTAG00000018717	DDX20	99	83.109	Bos_taurus
MGP_SPRETEiJ_G0026423	Ddx20	98	82.042	ENSCJAG00000013428	DDX20	95	80.368	Callithrix_jacchus
MGP_SPRETEiJ_G0026423	Ddx20	97	83.375	ENSCAFG00000013674	DDX20	100	82.960	Canis_familiaris
MGP_SPRETEiJ_G0026423	Ddx20	99	82.339	ENSCAFG00020008055	DDX20	94	91.693	Canis_lupus_dingo
MGP_SPRETEiJ_G0026423	Ddx20	98	83.926	ENSCHIG00000011219	DDX20	99	83.843	Capra_hircus
MGP_SPRETEiJ_G0026423	Ddx20	97	84.472	ENSTSYG00000000153	DDX20	97	84.491	Carlito_syrichta
MGP_SPRETEiJ_G0026423	Ddx20	84	76.768	ENSCAPG00000017427	DDX20	100	76.768	Cavia_aperea
MGP_SPRETEiJ_G0026423	Ddx20	99	80.485	ENSCPOG00000032340	DDX20	95	83.185	Cavia_porcellus
MGP_SPRETEiJ_G0026423	Ddx20	99	83.131	ENSCCAG00000026759	DDX20	99	83.067	Cebus_capucinus
MGP_SPRETEiJ_G0026423	Ddx20	99	82.545	ENSCATG00000039030	DDX20	98	83.354	Cercocebus_atys
MGP_SPRETEiJ_G0026423	Ddx20	99	80.848	ENSCLAG00000008874	DDX20	98	81.527	Chinchilla_lanigera
MGP_SPRETEiJ_G0026423	Ddx20	99	82.909	ENSCSAG00000001582	DDX20	98	83.600	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026423	Ddx20	63	86.228	ENSCHOG00000002610	DDX20	77	86.228	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026423	Ddx20	94	63.325	ENSCPBG00000021256	DDX20	98	63.371	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026423	Ddx20	99	82.909	ENSCANG00000041894	DDX20	98	83.600	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026423	Ddx20	99	91.544	ENSCGRG00001014132	Ddx20	99	91.544	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026423	Ddx20	87	90.833	ENSCGRG00000002300	Ddx20	100	90.833	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026423	Ddx20	62	55.218	ENSCSEG00000018265	DDX20	62	55.218	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026423	Ddx20	95	51.779	ENSCVAG00000014821	ddx20	99	51.229	Cyprinodon_variegatus
MGP_SPRETEiJ_G0026423	Ddx20	70	62.306	ENSDARG00000061204	ddx20	96	51.311	Danio_rerio
MGP_SPRETEiJ_G0026423	Ddx20	99	83.436	ENSDNOG00000030865	DDX20	99	83.436	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026423	Ddx20	98	84.975	ENSDORG00000011660	Ddx20	99	85.012	Dipodomys_ordii
MGP_SPRETEiJ_G0026423	Ddx20	66	95.506	ENSETEG00000002726	DDX20	65	93.407	Echinops_telfairi
MGP_SPRETEiJ_G0026423	Ddx20	98	84.010	ENSEASG00005005454	DDX20	99	83.926	Equus_asinus_asinus
MGP_SPRETEiJ_G0026423	Ddx20	98	84.133	ENSECAG00000013565	DDX20	99	84.049	Equus_caballus
MGP_SPRETEiJ_G0026423	Ddx20	95	48.916	ENSELUG00000010260	ddx20	99	48.795	Esox_lucius
MGP_SPRETEiJ_G0026423	Ddx20	98	84.133	ENSFCAG00000025736	DDX20	99	84.049	Felis_catus
MGP_SPRETEiJ_G0026423	Ddx20	87	57.514	ENSFALG00000000666	DDX20	99	57.750	Ficedula_albicollis
MGP_SPRETEiJ_G0026423	Ddx20	99	76.546	ENSFDAG00000001140	DDX20	98	76.805	Fukomys_damarensis
MGP_SPRETEiJ_G0026423	Ddx20	95	51.784	ENSFHEG00000019742	ddx20	99	51.301	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026423	Ddx20	93	60.563	ENSGALG00000001504	DDX20	99	60.307	Gallus_gallus
MGP_SPRETEiJ_G0026423	Ddx20	95	52.861	ENSGAFG00000006427	ddx20	99	52.736	Gambusia_affinis
MGP_SPRETEiJ_G0026423	Ddx20	94	63.868	ENSGAGG00000000130	DDX20	99	63.868	Gopherus_agassizii
MGP_SPRETEiJ_G0026423	Ddx20	99	83.010	ENSGGOG00000015576	DDX20	99	83.190	Gorilla_gorilla
MGP_SPRETEiJ_G0026423	Ddx20	73	61.201	ENSHBUG00000007853	ddx20	73	61.102	Haplochromis_burtoni
MGP_SPRETEiJ_G0026423	Ddx20	99	80.583	ENSHGLG00000014848	DDX20	98	80.911	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026423	Ddx20	99	80.583	ENSHGLG00100003740	DDX20	98	80.911	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026423	Ddx20	95	51.870	ENSHCOG00000001915	ddx20	73	61.186	Hippocampus_comes
MGP_SPRETEiJ_G0026423	Ddx20	70	61.274	ENSIPUG00000004876	ddx20	69	61.274	Ictalurus_punctatus
MGP_SPRETEiJ_G0026423	Ddx20	98	84.256	ENSSTOG00000029089	DDX20	99	84.049	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026423	Ddx20	99	84.709	ENSJJAG00000011198	Ddx20	99	84.785	Jaculus_jaculus
MGP_SPRETEiJ_G0026423	Ddx20	95	50.672	ENSKMAG00000019022	ddx20	99	50.794	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026423	Ddx20	95	51.220	ENSLBEG00000019194	ddx20	97	50.916	Labrus_bergylta
MGP_SPRETEiJ_G0026423	Ddx20	95	55.814	ENSLACG00000018491	DDX20	99	57.391	Latimeria_chalumnae
MGP_SPRETEiJ_G0026423	Ddx20	95	54.321	ENSLOCG00000010372	ddx20	73	64.846	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026423	Ddx20	94	82.519	ENSLAFG00000014646	DDX20	100	80.395	Loxodonta_africana
MGP_SPRETEiJ_G0026423	Ddx20	99	83.007	ENSMFAG00000031755	DDX20	98	83.600	Macaca_fascicularis
MGP_SPRETEiJ_G0026423	Ddx20	99	82.909	ENSMNEG00000005757	DDX20	98	83.600	Macaca_nemestrina
MGP_SPRETEiJ_G0026423	Ddx20	99	82.545	ENSMLEG00000005722	DDX20	98	83.354	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026423	Ddx20	95	50.481	ENSMAMG00000009654	ddx20	85	60.784	Mastacembelus_armatus
MGP_SPRETEiJ_G0026423	Ddx20	73	61.039	ENSMZEG00005027081	ddx20	99	50.962	Maylandia_zebra
MGP_SPRETEiJ_G0026423	Ddx20	92	60.183	ENSMGAG00000004624	DDX20	99	59.922	Meleagris_gallopavo
MGP_SPRETEiJ_G0026423	Ddx20	99	90.686	ENSMAUG00000010659	Ddx20	99	90.686	Mesocricetus_auratus
MGP_SPRETEiJ_G0026423	Ddx20	99	84.587	ENSMICG00000011509	DDX20	99	84.540	Microcebus_murinus
MGP_SPRETEiJ_G0026423	Ddx20	99	88.848	ENSMOCG00000012954	Ddx20	99	88.848	Microtus_ochrogaster
MGP_SPRETEiJ_G0026423	Ddx20	95	50.309	ENSMMOG00000013103	ddx20	99	50.368	Mola_mola
MGP_SPRETEiJ_G0026423	Ddx20	95	74.714	ENSMODG00000001311	DDX20	94	74.714	Monodelphis_domestica
MGP_SPRETEiJ_G0026423	Ddx20	95	49.645	ENSMALG00000010740	ddx20	82	61.395	Monopterus_albus
MGP_SPRETEiJ_G0026423	Ddx20	100	98.061	MGP_CAROLIEiJ_G0025474	Ddx20	100	98.061	Mus_caroli
MGP_SPRETEiJ_G0026423	Ddx20	100	98.909	ENSMUSG00000027905	Ddx20	100	98.909	Mus_musculus
MGP_SPRETEiJ_G0026423	Ddx20	99	96.069	MGP_PahariEiJ_G0026919	Ddx20	98	96.069	Mus_pahari
MGP_SPRETEiJ_G0026423	Ddx20	98	83.764	ENSMPUG00000004921	DDX20	99	83.681	Mustela_putorius_furo
MGP_SPRETEiJ_G0026423	Ddx20	84	80.087	ENSMLUG00000009676	DDX20	100	80.087	Myotis_lucifugus
MGP_SPRETEiJ_G0026423	Ddx20	99	85.558	ENSNGAG00000022953	Ddx20	99	85.644	Nannospalax_galili
MGP_SPRETEiJ_G0026423	Ddx20	95	52.689	ENSNBRG00000020244	ddx20	70	63.058	Neolamprologus_brichardi
MGP_SPRETEiJ_G0026423	Ddx20	99	83.738	ENSNLEG00000004040	DDX20	99	83.804	Nomascus_leucogenys
MGP_SPRETEiJ_G0026423	Ddx20	62	76.289	ENSMEUG00000013459	-	63	76.289	Notamacropus_eugenii
MGP_SPRETEiJ_G0026423	Ddx20	66	92.262	ENSOPRG00000004035	DDX20	84	90.057	Ochotona_princeps
MGP_SPRETEiJ_G0026423	Ddx20	72	62.500	ENSONIG00000012436	ddx20	99	53.043	Oreochromis_niloticus
MGP_SPRETEiJ_G0026423	Ddx20	71	74.573	ENSOANG00000003318	DDX20	91	74.407	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026423	Ddx20	99	81.896	ENSOCUG00000025939	DDX20	99	83.067	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026423	Ddx20	95	52.125	ENSORLG00000008949	ddx20	99	50.748	Oryzias_latipes
MGP_SPRETEiJ_G0026423	Ddx20	95	52.519	ENSORLG00020003852	ddx20	99	52.273	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026423	Ddx20	95	52.375	ENSORLG00015020167	ddx20	99	50.748	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026423	Ddx20	95	51.553	ENSOMEG00000013657	ddx20	99	52.060	Oryzias_melastigma
MGP_SPRETEiJ_G0026423	Ddx20	99	84.383	ENSOGAG00000010503	DDX20	99	84.578	Otolemur_garnettii
MGP_SPRETEiJ_G0026423	Ddx20	98	83.966	ENSOARG00000019651	DDX20	99	83.883	Ovis_aries
MGP_SPRETEiJ_G0026423	Ddx20	99	82.864	ENSPPAG00000031680	DDX20	99	82.945	Pan_paniscus
MGP_SPRETEiJ_G0026423	Ddx20	99	84.172	ENSPPRG00000022979	DDX20	99	84.172	Panthera_pardus
MGP_SPRETEiJ_G0026423	Ddx20	99	82.864	ENSPTRG00000001105	DDX20	99	82.945	Pan_troglodytes
MGP_SPRETEiJ_G0026423	Ddx20	99	82.667	ENSPANG00000017985	DDX20	98	83.477	Papio_anubis
MGP_SPRETEiJ_G0026423	Ddx20	67	63.309	ENSPKIG00000020161	ddx20	99	52.474	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026423	Ddx20	88	60.627	ENSPSIG00000003636	DDX20	100	60.490	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026423	Ddx20	95	51.557	ENSPMGG00000005966	ddx20	99	51.681	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026423	Ddx20	99	91.656	ENSPEMG00000019595	Ddx20	99	91.656	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026423	Ddx20	99	71.947	ENSPCIG00000027721	DDX20	99	72.727	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026423	Ddx20	95	52.481	ENSPFOG00000010540	ddx20	99	52.671	Poecilia_formosa
MGP_SPRETEiJ_G0026423	Ddx20	95	52.276	ENSPLAG00000009925	ddx20	99	52.340	Poecilia_latipinna
MGP_SPRETEiJ_G0026423	Ddx20	95	52.174	ENSPMEG00000005998	ddx20	99	52.363	Poecilia_mexicana
MGP_SPRETEiJ_G0026423	Ddx20	95	52.664	ENSPREG00000018837	ddx20	99	52.788	Poecilia_reticulata
MGP_SPRETEiJ_G0026423	Ddx20	99	83.495	ENSPPYG00000001026	DDX20	99	83.558	Pongo_abelii
MGP_SPRETEiJ_G0026423	Ddx20	99	83.859	ENSPCOG00000025185	DDX20	99	83.926	Propithecus_coquereli
MGP_SPRETEiJ_G0026423	Ddx20	99	82.888	ENSPVAG00000004664	DDX20	99	82.945	Pteropus_vampyrus
MGP_SPRETEiJ_G0026423	Ddx20	73	61.138	ENSPNYG00000014433	ddx20	99	51.023	Pundamilia_nyererei
MGP_SPRETEiJ_G0026423	Ddx20	72	60.033	ENSPNAG00000018148	ddx20	73	60.033	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026423	Ddx20	99	92.831	ENSRNOG00000015274	Ddx20	99	93.235	Rattus_norvegicus
MGP_SPRETEiJ_G0026423	Ddx20	99	82.788	ENSRBIG00000030629	DDX20	98	83.477	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026423	Ddx20	99	82.788	ENSRROG00000030608	DDX20	98	83.477	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026423	Ddx20	99	83.495	ENSSBOG00000024789	DDX20	99	83.436	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026423	Ddx20	84	71.839	ENSSHAG00000014518	DDX20	99	71.839	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026423	Ddx20	95	52.963	ENSSFOG00015008354	ddx20	72	64.068	Scleropages_formosus
MGP_SPRETEiJ_G0026423	Ddx20	76	60.647	ENSSMAG00000007498	ddx20	79	62.651	Scophthalmus_maximus
MGP_SPRETEiJ_G0026423	Ddx20	95	53.176	ENSSDUG00000015980	ddx20	99	53.300	Seriola_dumerili
MGP_SPRETEiJ_G0026423	Ddx20	74	60.884	ENSSLDG00000000437	ddx20	67	60.956	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026423	Ddx20	88	70.856	ENSSARG00000013569	DDX20	88	70.856	Sorex_araneus
MGP_SPRETEiJ_G0026423	Ddx20	96	50.058	ENSSPAG00000020022	ddx20	82	61.039	Stegastes_partitus
MGP_SPRETEiJ_G0026423	Ddx20	98	83.170	ENSSSCG00000006783	DDX20	98	83.170	Sus_scrofa
MGP_SPRETEiJ_G0026423	Ddx20	81	64.042	ENSTGUG00000013660	DDX20	85	69.454	Taeniopygia_guttata
MGP_SPRETEiJ_G0026423	Ddx20	70	60.377	ENSTRUG00000023712	ddx20	71	60.647	Takifugu_rubripes
MGP_SPRETEiJ_G0026423	Ddx20	95	50.060	ENSTNIG00000019425	ddx20	99	49.577	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0026423	Ddx20	84	83.422	ENSTTRG00000005131	DDX20	83	84.270	Tursiops_truncatus
MGP_SPRETEiJ_G0026423	Ddx20	98	80.443	ENSUAMG00000018924	DDX20	99	81.472	Ursus_americanus
MGP_SPRETEiJ_G0026423	Ddx20	88	83.058	ENSUMAG00000013897	DDX20	92	83.058	Ursus_maritimus
MGP_SPRETEiJ_G0026423	Ddx20	98	82.209	ENSVPAG00000010031	DDX20	99	82.130	Vicugna_pacos
MGP_SPRETEiJ_G0026423	Ddx20	99	82.746	ENSVVUG00000016236	DDX20	99	82.555	Vulpes_vulpes
MGP_SPRETEiJ_G0026423	Ddx20	94	56.905	ENSXETG00000013568	ddx20	100	56.258	Xenopus_tropicalis
MGP_SPRETEiJ_G0026423	Ddx20	96	51.843	ENSXCOG00000007952	ddx20	98	51.784	Xiphophorus_couchianus
MGP_SPRETEiJ_G0026423	Ddx20	95	52.174	ENSXMAG00000007573	ddx20	99	52.114	Xiphophorus_maculatus