EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0026518 (Gene tree)
Gene ID
-
Gene Symbol
Trmt13
Alias
4631408H19Rik|A930028L21Rik|Ccdc76
Full Name
tRNA methyltransferase 13
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
34347 bases
Position
chr3:115061275-115095621
Accession
1925219
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0062523TRM13PF05206.143e-9411
MGP_SPRETEiJ_P0062528TRM13PF05206.142.7e-1811
MGP_SPRETEiJ_P0062523zf-U11-48KPF05253.124.6e-0911
MGP_SPRETEiJ_P0062531zf-TRM13_CCCHPF11722.86e-1411
MGP_SPRETEiJ_P0062523zf-TRM13_CCCHPF11722.84.8e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0062531-872-MGP_SPRETEiJ_P0062531146 (aa)--
MGP_SPRETEiJ_T0062523-3403-MGP_SPRETEiJ_P0062523481 (aa)--
MGP_SPRETEiJ_T0062526-864--- (aa)--
MGP_SPRETEiJ_T0062527-1984--- (aa)--
MGP_SPRETEiJ_T0062524-1617-MGP_SPRETEiJ_P0062524292 (aa)--
MGP_SPRETEiJ_T0062525-1724-MGP_SPRETEiJ_P0062525176 (aa)--
MGP_SPRETEiJ_T0062538-741--- (aa)--
MGP_SPRETEiJ_T0062528-538-MGP_SPRETEiJ_P0062528179 (aa)-UPI000620ABB3
MGP_SPRETEiJ_T0062529-459-MGP_SPRETEiJ_P006252964 (aa)--
MGP_SPRETEiJ_T0062530-663--- (aa)--
MGP_SPRETEiJ_T0062537-290--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0026518's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026518's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0026518Trmt139986.164ENSG00000122435TRMT139986.164Homo_sapiens
MGP_SPRETEiJ_G0026518Trmt137572.917ENSAPOG00000015131trmt139948.697Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026518Trmt139491.071ENSAMEG00000008917TRMT139984.277Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026518Trmt139855.495ENSACIG00000005804trmt1310046.853Amphilophus_citrinellus
MGP_SPRETEiJ_G0026518Trmt137572.917ENSAOCG00000023585trmt139948.497Amphiprion_ocellaris
MGP_SPRETEiJ_G0026518Trmt137572.917ENSAPEG00000004025trmt139948.810Amphiprion_percula
MGP_SPRETEiJ_G0026518Trmt137577.083ENSATEG00000006597trmt139851.346Anabas_testudineus
MGP_SPRETEiJ_G0026518Trmt139472.619ENSAPLG00000014924TRMT139966.745Anas_platyrhynchos
MGP_SPRETEiJ_G0026518Trmt139468.639ENSACAG00000003498TRMT139963.270Anolis_carolinensis
MGP_SPRETEiJ_G0026518Trmt139986.583ENSANAG00000019525TRMT139987.963Aotus_nancymaae
MGP_SPRETEiJ_G0026518Trmt139857.143ENSACLG00000020018trmt139953.648Astatotilapia_calliptera
MGP_SPRETEiJ_G0026518Trmt139461.905ENSAMXG00000017963trmt139955.021Astyanax_mexicanus
MGP_SPRETEiJ_G0026518Trmt139490.476ENSBTAG00000015781TRMT139984.310Bos_taurus
MGP_SPRETEiJ_G0026518Trmt138730.943WBGene00013026Y49A3A.36430.943Caenorhabditis_elegans
MGP_SPRETEiJ_G0026518Trmt139984.906ENSCJAG00000000200TRMT139887.963Callithrix_jacchus
MGP_SPRETEiJ_G0026518Trmt136585.577ENSCAFG00000020021TRMT139885.577Canis_familiaris
MGP_SPRETEiJ_G0026518Trmt139491.071ENSCAFG00020011572TRMT139986.760Canis_lupus_dingo
MGP_SPRETEiJ_G0026518Trmt139491.071ENSCHIG00000015395TRMT139984.310Capra_hircus
MGP_SPRETEiJ_G0026518Trmt139491.667ENSTSYG00000010811TRMT139886.869Carlito_syrichta
MGP_SPRETEiJ_G0026518Trmt135397.059ENSCAPG00000009085TRMT1310066.667Cavia_aperea
MGP_SPRETEiJ_G0026518Trmt139490.476ENSCPOG00000000694TRMT139984.937Cavia_porcellus
MGP_SPRETEiJ_G0026518Trmt139986.164ENSCCAG00000023772TRMT139987.037Cebus_capucinus
MGP_SPRETEiJ_G0026518Trmt139492.262ENSCATG00000033556TRMT139986.164Cercocebus_atys
MGP_SPRETEiJ_G0026518Trmt139490.476ENSCLAG00000008220TRMT139983.019Chinchilla_lanigera
MGP_SPRETEiJ_G0026518Trmt139491.667ENSCSAG00000001506TRMT139986.373Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026518Trmt139474.405ENSCPBG00000026671TRMT139968.211Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026518Trmt139492.262ENSCANG00000034659TRMT139987.037Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026518Trmt139989.212ENSCGRG00001021601Trmt1310089.212Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026518Trmt135387.597ENSCGRG00000000093-9987.597Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026518Trmt139849.724ENSCSEG00000000591trmt139749.142Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026518Trmt139851.042ENSCVAG00000017342trmt139450.313Cyprinodon_variegatus
MGP_SPRETEiJ_G0026518Trmt139856.780ENSDARG00000102846trmt139856.780Danio_rerio
MGP_SPRETEiJ_G0026518Trmt139488.690ENSDNOG00000001710TRMT138983.849Dasypus_novemcinctus
MGP_SPRETEiJ_G0026518Trmt139983.857ENSDORG00000015808Trmt139983.857Dipodomys_ordii
MGP_SPRETEiJ_G0026518Trmt139532.285FBgn0037435CG180489432.285Drosophila_melanogaster
MGP_SPRETEiJ_G0026518Trmt139971.608ENSETEG00000005819TRMT139971.608Echinops_telfairi
MGP_SPRETEiJ_G0026518Trmt139447.619ENSEBUG00000014444trmt139646.220Eptatretus_burgeri
MGP_SPRETEiJ_G0026518Trmt139492.857ENSEASG00005015918TRMT139986.820Equus_asinus_asinus
MGP_SPRETEiJ_G0026518Trmt139492.857ENSECAG00000022626TRMT139986.402Equus_caballus
MGP_SPRETEiJ_G0026518Trmt139486.905ENSEEUG00000000294TRMT137876.271Erinaceus_europaeus
MGP_SPRETEiJ_G0026518Trmt139464.286ENSELUG00000003803trmt139956.000Esox_lucius
MGP_SPRETEiJ_G0026518Trmt139492.857ENSFCAG00000030618TRMT1310086.239Felis_catus
MGP_SPRETEiJ_G0026518Trmt139473.214ENSFALG00000002424TRMT139864.255Ficedula_albicollis
MGP_SPRETEiJ_G0026518Trmt139492.262ENSFDAG00000006342TRMT139985.804Fukomys_damarensis
MGP_SPRETEiJ_G0026518Trmt139851.667ENSFHEG00000022954trmt139852.357Fundulus_heteroclitus
MGP_SPRETEiJ_G0026518Trmt139455.952ENSGMOG00000013223trmt1310050.220Gadus_morhua
MGP_SPRETEiJ_G0026518Trmt139173.006ENSGALG00000005290TRMT139864.179Gallus_gallus
MGP_SPRETEiJ_G0026518Trmt139751.178ENSGAFG00000001577trmt138250.396Gambusia_affinis
MGP_SPRETEiJ_G0026518Trmt139750.951ENSGACG00000013428trmt139951.261Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026518Trmt139475.148ENSGAGG00000023303TRMT139973.260Gopherus_agassizii
MGP_SPRETEiJ_G0026518Trmt139985.954ENSGGOG00000005616TRMT139985.954Gorilla_gorilla
MGP_SPRETEiJ_G0026518Trmt139857.143ENSHBUG00000007754trmt139953.747Haplochromis_burtoni
MGP_SPRETEiJ_G0026518Trmt139492.857ENSHGLG00000002164TRMT139987.265Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026518Trmt139492.857ENSHGLG00100001618TRMT139987.265Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026518Trmt139547.817ENSHCOG00000020553trmt139647.817Hippocampus_comes
MGP_SPRETEiJ_G0026518Trmt139464.286ENSIPUG00000024787trmt139957.234Ictalurus_punctatus
MGP_SPRETEiJ_G0026518Trmt139491.667ENSSTOG00000013483TRMT139986.373Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026518Trmt139490.476ENSJJAG00000018012Trmt139984.989Jaculus_jaculus
MGP_SPRETEiJ_G0026518Trmt136552.188ENSKMAG00000007639trmt139452.188Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026518Trmt137572.917ENSLBEG00000020238trmt139951.566Labrus_bergylta
MGP_SPRETEiJ_G0026518Trmt139466.667ENSLACG00000013153TRMT139960.859Latimeria_chalumnae
MGP_SPRETEiJ_G0026518Trmt139864.205ENSLOCG00000000418trmt139859.698Lepisosteus_oculatus
MGP_SPRETEiJ_G0026518Trmt137783.784ENSLAFG00000002383TRMT1310083.784Loxodonta_africana
MGP_SPRETEiJ_G0026518Trmt139492.262ENSMFAG00000034681TRMT139987.037Macaca_fascicularis
MGP_SPRETEiJ_G0026518Trmt139492.262ENSMMUG00000004243TRMT139987.037Macaca_mulatta
MGP_SPRETEiJ_G0026518Trmt139492.262ENSMNEG00000036102TRMT139987.037Macaca_nemestrina
MGP_SPRETEiJ_G0026518Trmt139492.262ENSMLEG00000034258TRMT139987.037Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026518Trmt137872.000ENSMAMG00000016597trmt139552.814Mastacembelus_armatus
MGP_SPRETEiJ_G0026518Trmt139856.593ENSMZEG00005020959trmt139953.433Maylandia_zebra
MGP_SPRETEiJ_G0026518Trmt139473.214ENSMGAG00000006970TRMT139966.114Meleagris_gallopavo
MGP_SPRETEiJ_G0026518Trmt139494.048ENSMAUG00000010448Trmt1310087.344Mesocricetus_auratus
MGP_SPRETEiJ_G0026518Trmt139492.262ENSMICG00000005283TRMT1310087.156Microcebus_murinus
MGP_SPRETEiJ_G0026518Trmt139492.857ENSMOCG00000019914Trmt139986.820Microtus_ochrogaster
MGP_SPRETEiJ_G0026518Trmt139150.549ENSMMOG00000007762trmt139250.549Mola_mola
MGP_SPRETEiJ_G0026518Trmt139483.333ENSMODG00000003646TRMT139973.542Monodelphis_domestica
MGP_SPRETEiJ_G0026518Trmt139458.333ENSMALG00000020965trmt139949.896Monopterus_albus
MGP_SPRETEiJ_G0026518Trmt1310099.432MGP_CAROLIEiJ_G0025568Trmt1310099.432Mus_caroli
MGP_SPRETEiJ_G0026518Trmt13100100.000ENSMUSG00000033439Trmt13100100.000Mus_musculus
MGP_SPRETEiJ_G0026518Trmt1310096.591MGP_PahariEiJ_G0027014Trmt1310096.591Mus_pahari
MGP_SPRETEiJ_G0026518Trmt137593.750ENSMPUG00000012169-9785.606Mustela_putorius_furo
MGP_SPRETEiJ_G0026518Trmt137291.406ENSMPUG00000002078-9982.540Mustela_putorius_furo
MGP_SPRETEiJ_G0026518Trmt139489.881ENSMLUG00000002124TRMT139877.801Myotis_lucifugus
MGP_SPRETEiJ_G0026518Trmt139855.435ENSNBRG00000006783trmt139749.683Neolamprologus_brichardi
MGP_SPRETEiJ_G0026518Trmt139986.164ENSNLEG00000035917TRMT139987.037Nomascus_leucogenys
MGP_SPRETEiJ_G0026518Trmt139566.071ENSMEUG00000013346-10070.968Notamacropus_eugenii
MGP_SPRETEiJ_G0026518Trmt139489.881ENSOPRG00000012048TRMT136689.706Ochotona_princeps
MGP_SPRETEiJ_G0026518Trmt139987.429ENSODEG00000006075-10087.429Octodon_degus
MGP_SPRETEiJ_G0026518Trmt139856.831ENSONIG00000004574trmt139953.731Oreochromis_niloticus
MGP_SPRETEiJ_G0026518Trmt139478.571ENSOANG00000012057TRMT139971.694Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026518Trmt139986.164ENSOCUG00000023095TRMT139986.164Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026518Trmt139648.203ENSORLG00000003320trmt139948.218Oryzias_latipes
MGP_SPRETEiJ_G0026518Trmt139650.000ENSORLG00020005972trmt139748.734Oryzias_latipes_hni
MGP_SPRETEiJ_G0026518Trmt139456.571ENSORLG00015002270trmt139952.119Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026518Trmt139654.749ENSOMEG00000006724trmt139551.695Oryzias_melastigma
MGP_SPRETEiJ_G0026518Trmt139491.071ENSOGAG00000005618TRMT139685.774Otolemur_garnettii
MGP_SPRETEiJ_G0026518Trmt139491.071ENSOARG00000017983TRMT139984.310Ovis_aries
MGP_SPRETEiJ_G0026518Trmt139985.954ENSPPAG00000043736TRMT139986.111Pan_paniscus
MGP_SPRETEiJ_G0026518Trmt139492.857ENSPPRG00000003424TRMT1310086.239Panthera_pardus
MGP_SPRETEiJ_G0026518Trmt139492.857ENSPTIG00000018598TRMT1310086.239Panthera_tigris_altaica
MGP_SPRETEiJ_G0026518Trmt139985.954ENSPTRG00000001001TRMT139986.111Pan_troglodytes
MGP_SPRETEiJ_G0026518Trmt139492.262ENSPANG00000007598TRMT139987.037Papio_anubis
MGP_SPRETEiJ_G0026518Trmt139661.628ENSPKIG00000001514trmt139856.645Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026518Trmt139472.189ENSPSIG00000012703TRMT139967.626Pelodiscus_sinensis
MGP_SPRETEiJ_G0026518Trmt137575.000ENSPMGG00000013298trmt139651.059Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026518Trmt139988.494ENSPEMG00000000275Trmt139988.494Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026518Trmt139152.695ENSPMAG00000000823trmt1310045.344Petromyzon_marinus
MGP_SPRETEiJ_G0026518Trmt139482.738ENSPCIG00000007699TRMT139974.370Phascolarctos_cinereus
MGP_SPRETEiJ_G0026518Trmt139652.326ENSPFOG00000008675trmt139649.785Poecilia_formosa
MGP_SPRETEiJ_G0026518Trmt139650.820ENSPLAG00000009709trmt139949.156Poecilia_latipinna
MGP_SPRETEiJ_G0026518Trmt139649.180ENSPMEG00000022954trmt139948.101Poecilia_mexicana
MGP_SPRETEiJ_G0026518Trmt139849.733ENSPREG00000005645trmt139450.877Poecilia_reticulata
MGP_SPRETEiJ_G0026518Trmt139985.565ENSPPYG00000001120TRMT139985.565Pongo_abelii
MGP_SPRETEiJ_G0026518Trmt139984.519ENSPCAG00000002340TRMT139984.519Procavia_capensis
MGP_SPRETEiJ_G0026518Trmt139986.820ENSPCOG00000017984TRMT139987.963Propithecus_coquereli
MGP_SPRETEiJ_G0026518Trmt139985.774ENSPVAG00000017430TRMT139985.774Pteropus_vampyrus
MGP_SPRETEiJ_G0026518Trmt139856.044ENSPNYG00000013690trmt139951.820Pundamilia_nyererei
MGP_SPRETEiJ_G0026518Trmt139460.714ENSPNAG00000022130trmt139956.009Pygocentrus_nattereri
MGP_SPRETEiJ_G0026518Trmt139995.000ENSRNOG00000015140Trmt139795.000Rattus_norvegicus
MGP_SPRETEiJ_G0026518Trmt139492.262ENSRBIG00000037686TRMT139987.037Rhinopithecus_bieti
MGP_SPRETEiJ_G0026518Trmt139492.262ENSRROG00000044057TRMT139987.037Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026518Trmt139491.667ENSSBOG00000026541TRMT139987.963Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026518Trmt139483.333ENSSHAG00000005213TRMT139575.524Sarcophilus_harrisii
MGP_SPRETEiJ_G0026518Trmt139462.500ENSSFOG00015017560trmt139855.342Scleropages_formosus
MGP_SPRETEiJ_G0026518Trmt139951.913ENSSMAG00000014592trmt139750.105Scophthalmus_maximus
MGP_SPRETEiJ_G0026518Trmt139852.198ENSSDUG00000015508trmt139850.102Seriola_dumerili
MGP_SPRETEiJ_G0026518Trmt139852.198ENSSLDG00000019060trmt139750.513Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026518Trmt138785.621ENSSARG00000010344TRMT139973.517Sorex_araneus
MGP_SPRETEiJ_G0026518Trmt139471.429ENSSPUG00000016339TRMT139967.982Sphenodon_punctatus
MGP_SPRETEiJ_G0026518Trmt139854.891ENSSPAG00000011922trmt139852.473Stegastes_partitus
MGP_SPRETEiJ_G0026518Trmt139491.667ENSSSCG00000006869TRMT139984.728Sus_scrofa
MGP_SPRETEiJ_G0026518Trmt139473.810ENSTGUG00000005253TRMT139865.864Taeniopygia_guttata
MGP_SPRETEiJ_G0026518Trmt139652.809ENSTRUG00000008400trmt139750.426Takifugu_rubripes
MGP_SPRETEiJ_G0026518Trmt138886.076ENSTBEG00000008911TRMT139969.492Tupaia_belangeri
MGP_SPRETEiJ_G0026518Trmt137595.833ENSTTRG00000015302-6090.789Tursiops_truncatus
MGP_SPRETEiJ_G0026518Trmt139880.126ENSUAMG00000017251TRMT139980.126Ursus_americanus
MGP_SPRETEiJ_G0026518Trmt139491.071ENSUMAG00000007901TRMT139985.781Ursus_maritimus
MGP_SPRETEiJ_G0026518Trmt138870.449ENSVPAG00000001034TRMT139870.449Vicugna_pacos
MGP_SPRETEiJ_G0026518Trmt139690.116ENSVVUG00000021996TRMT139985.356Vulpes_vulpes
MGP_SPRETEiJ_G0026518Trmt137583.333ENSXETG00000013204trmt139955.839Xenopus_tropicalis
MGP_SPRETEiJ_G0026518Trmt137566.667ENSXCOG00000008120-9154.545Xiphophorus_couchianus
MGP_SPRETEiJ_G0026518Trmt139849.198ENSXMAG00000010765trmt139948.000Xiphophorus_maculatus

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