EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026566 (Gene tree)
Gene ID: -
Gene Symbol: Larp7
Alias: -
Full Name: La ribonucleoprotein domain family%2C member 7
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19384 bases
Position: chr3:126544311-126563694
Accession: 107634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0062822	RRM_1	PF00076.22	2e-18	1	1
MGP_SPRETEiJ_P0062822	RRM_3	PF08777.11	2.6e-29	1	1
MGP_SPRETEiJ_P0062824	La	PF05383.17	2.4e-22	1	1
MGP_SPRETEiJ_P0062822	La	PF05383.17	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0062822	-	2072	-	MGP_SPRETEiJ_P0062822	573 (aa)	-	-
MGP_SPRETEiJ_T0062824	-	564	-	MGP_SPRETEiJ_P0062824	110 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0026566	Larp7	68	41.250	MGP_SPRETEiJ_G0024551	Ssb	84	32.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026566	Larp7	96	82.469	ENSG00000174720	LARP7	95	82.374	Homo_sapiens
MGP_SPRETEiJ_G0026566	Larp7	100	79.829	ENSAMEG00000015642	LARP7	95	81.261	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026566	Larp7	98	53.191	ENSACIG00000023850	larp7	94	51.681	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026566	Larp7	96	54.448	ENSAPEG00000021823	larp7	95	53.514	Amphiprion_percula
MGP_SPRETEiJ_G0026566	Larp7	98	56.261	ENSATEG00000016238	larp7	95	56.887	Anabas_testudineus
MGP_SPRETEiJ_G0026566	Larp7	88	83.168	ENSAPLG00000012887	LARP7	94	69.808	Anas_platyrhynchos
MGP_SPRETEiJ_G0026566	Larp7	88	80.198	ENSACAG00000010662	LARP7	91	67.321	Anolis_carolinensis
MGP_SPRETEiJ_G0026566	Larp7	96	66.308	ENSANAG00000022318	-	94	66.486	Aotus_nancymaae
MGP_SPRETEiJ_G0026566	Larp7	96	81.786	ENSANAG00000031139	-	95	81.688	Aotus_nancymaae
MGP_SPRETEiJ_G0026566	Larp7	98	54.231	ENSACLG00000023184	larp7	95	53.915	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026566	Larp7	83	73.626	ENSAMXG00000002549	larp7	94	51.670	Astyanax_mexicanus
MGP_SPRETEiJ_G0026566	Larp7	100	80.274	ENSBTAG00000009632	LARP7	93	81.081	Bos_taurus
MGP_SPRETEiJ_G0026566	Larp7	96	83.154	ENSCJAG00000003711	LARP7	95	83.063	Callithrix_jacchus
MGP_SPRETEiJ_G0026566	Larp7	96	79.857	ENSCAFG00000011715	LARP7	95	80.143	Canis_familiaris
MGP_SPRETEiJ_G0026566	Larp7	96	80.824	ENSCAFG00020017225	LARP7	95	80.721	Canis_lupus_dingo
MGP_SPRETEiJ_G0026566	Larp7	96	81.688	ENSCHIG00000014163	-	95	81.588	Capra_hircus
MGP_SPRETEiJ_G0026566	Larp7	100	68.750	ENSCHIG00000013971	-	92	85.068	Capra_hircus
MGP_SPRETEiJ_G0026566	Larp7	96	74.364	ENSTSYG00000035188	-	97	74.088	Carlito_syrichta
MGP_SPRETEiJ_G0026566	Larp7	90	82.342	ENSTSYG00000006769	-	95	82.239	Carlito_syrichta
MGP_SPRETEiJ_G0026566	Larp7	100	73.519	ENSCAPG00000009328	LARP7	95	73.358	Cavia_aperea
MGP_SPRETEiJ_G0026566	Larp7	100	81.533	ENSCPOG00000011830	LARP7	95	81.934	Cavia_porcellus
MGP_SPRETEiJ_G0026566	Larp7	96	75.182	ENSCCAG00000023563	-	100	75.182	Cebus_capucinus
MGP_SPRETEiJ_G0026566	Larp7	96	83.214	ENSCCAG00000026787	-	95	83.124	Cebus_capucinus
MGP_SPRETEiJ_G0026566	Larp7	96	82.437	ENSCATG00000043535	LARP7	95	82.342	Cercocebus_atys
MGP_SPRETEiJ_G0026566	Larp7	100	83.275	ENSCLAG00000005894	LARP7	95	84.124	Chinchilla_lanigera
MGP_SPRETEiJ_G0026566	Larp7	96	82.616	ENSCSAG00000003810	LARP7	95	82.523	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026566	Larp7	93	71.140	ENSCHOG00000008967	-	100	70.956	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026566	Larp7	100	79.174	ENSCHOG00000002379	-	95	80.108	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026566	Larp7	80	87.640	ENSCPBG00000004919	LARP7	96	69.894	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026566	Larp7	75	36.585	ENSCING00000021685	-	74	36.478	Ciona_intestinalis
MGP_SPRETEiJ_G0026566	Larp7	96	82.648	ENSCANG00000031482	LARP7	94	82.554	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026566	Larp7	88	93.814	ENSCGRG00001012747	-	99	81.731	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026566	Larp7	100	91.986	ENSCGRG00001025050	-	100	91.986	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026566	Larp7	88	93.814	ENSCGRG00000007642	-	99	82.940	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026566	Larp7	88	97.938	ENSCGRG00000001141	-	100	84.545	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026566	Larp7	97	54.145	ENSCVAG00000016852	larp7	78	73.889	Cyprinodon_variegatus
MGP_SPRETEiJ_G0026566	Larp7	98	54.545	ENSDARG00000017315	larp7	93	51.554	Danio_rerio
MGP_SPRETEiJ_G0026566	Larp7	100	79.557	ENSDNOG00000013761	LARP7	95	81.362	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026566	Larp7	96	84.755	ENSDORG00000008896	-	95	83.423	Dipodomys_ordii
MGP_SPRETEiJ_G0026566	Larp7	100	76.199	ENSETEG00000011692	LARP7	95	77.978	Echinops_telfairi
MGP_SPRETEiJ_G0026566	Larp7	100	80.855	ENSEASG00005005592	LARP7	95	82.342	Equus_asinus_asinus
MGP_SPRETEiJ_G0026566	Larp7	100	80.855	ENSECAG00000000834	LARP7	95	82.342	Equus_caballus
MGP_SPRETEiJ_G0026566	Larp7	92	79.317	ENSEEUG00000012824	LARP7	95	79.198	Erinaceus_europaeus
MGP_SPRETEiJ_G0026566	Larp7	82	75.556	ENSELUG00000015341	larp7	88	75.138	Esox_lucius
MGP_SPRETEiJ_G0026566	Larp7	96	81.867	ENSFCAG00000031966	LARP7	95	81.769	Felis_catus
MGP_SPRETEiJ_G0026566	Larp7	88	85.149	ENSFALG00000000972	LARP7	92	69.982	Ficedula_albicollis
MGP_SPRETEiJ_G0026566	Larp7	96	82.577	ENSFDAG00000014048	-	95	82.482	Fukomys_damarensis
MGP_SPRETEiJ_G0026566	Larp7	100	75.000	ENSFDAG00000011855	-	100	75.000	Fukomys_damarensis
MGP_SPRETEiJ_G0026566	Larp7	97	53.546	ENSFHEG00000021652	larp7	95	53.142	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026566	Larp7	88	85.149	ENSGALG00000012048	LARP7	94	67.314	Gallus_gallus
MGP_SPRETEiJ_G0026566	Larp7	88	66.327	ENSGACG00000019618	larp7	79	71.111	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026566	Larp7	99	67.000	ENSGAGG00000024520	LARP7	95	69.164	Gopherus_agassizii
MGP_SPRETEiJ_G0026566	Larp7	87	78.978	ENSGGOG00000006438	-	97	78.978	Gorilla_gorilla
MGP_SPRETEiJ_G0026566	Larp7	96	82.469	ENSGGOG00000023567	-	95	82.374	Gorilla_gorilla
MGP_SPRETEiJ_G0026566	Larp7	98	54.231	ENSHBUG00000019223	larp7	95	54.255	Haplochromis_burtoni
MGP_SPRETEiJ_G0026566	Larp7	96	80.824	ENSHGLG00000002716	LARP7	95	80.721	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026566	Larp7	96	80.824	ENSHGLG00100000332	LARP7	95	80.721	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026566	Larp7	97	53.899	ENSIPUG00000019886	larp7	94	52.993	Ictalurus_punctatus
MGP_SPRETEiJ_G0026566	Larp7	100	81.304	ENSSTOG00000011789	LARP7	100	82.676	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026566	Larp7	100	83.564	ENSJJAG00000000257	-	100	83.910	Jaculus_jaculus
MGP_SPRETEiJ_G0026566	Larp7	76	74.118	ENSKMAG00000005057	larp7	95	51.950	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026566	Larp7	98	51.979	ENSLBEG00000020062	larp7	95	51.687	Labrus_bergylta
MGP_SPRETEiJ_G0026566	Larp7	82	67.778	ENSLBEG00000018789	-	78	70.950	Labrus_bergylta
MGP_SPRETEiJ_G0026566	Larp7	99	58.167	ENSLACG00000013744	LARP7	95	58.377	Latimeria_chalumnae
MGP_SPRETEiJ_G0026566	Larp7	68	77.333	ENSLOCG00000011608	larp7	95	48.282	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026566	Larp7	100	81.787	ENSLAFG00000015769	LARP7	95	83.333	Loxodonta_africana
MGP_SPRETEiJ_G0026566	Larp7	96	82.437	ENSMFAG00000036506	LARP7	95	82.342	Macaca_fascicularis
MGP_SPRETEiJ_G0026566	Larp7	96	82.437	ENSMMUG00000017911	LARP7	95	82.342	Macaca_mulatta
MGP_SPRETEiJ_G0026566	Larp7	96	82.616	ENSMNEG00000034758	LARP7	100	80.830	Macaca_nemestrina
MGP_SPRETEiJ_G0026566	Larp7	96	82.616	ENSMLEG00000026154	LARP7	95	82.523	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026566	Larp7	98	54.231	ENSMZEG00005002084	larp7	95	53.915	Maylandia_zebra
MGP_SPRETEiJ_G0026566	Larp7	88	85.149	ENSMGAG00000010947	LARP7	95	69.982	Meleagris_gallopavo
MGP_SPRETEiJ_G0026566	Larp7	88	96.907	ENSMAUG00000005625	-	100	75.345	Mesocricetus_auratus
MGP_SPRETEiJ_G0026566	Larp7	96	82.616	ENSMICG00000031035	LARP7	95	82.703	Microcebus_murinus
MGP_SPRETEiJ_G0026566	Larp7	90	88.694	ENSMOCG00000015761	-	100	88.694	Microtus_ochrogaster
MGP_SPRETEiJ_G0026566	Larp7	100	91.826	ENSMOCG00000012519	-	100	91.826	Microtus_ochrogaster
MGP_SPRETEiJ_G0026566	Larp7	68	73.333	ENSMMOG00000011816	larp7	73	70.391	Mola_mola
MGP_SPRETEiJ_G0026566	Larp7	88	85.294	ENSMODG00000005669	LARP7	95	72.824	Monodelphis_domestica
MGP_SPRETEiJ_G0026566	Larp7	75	76.829	ENSMALG00000009893	larp7	78	75.556	Monopterus_albus
MGP_SPRETEiJ_G0026566	Larp7	100	98.255	MGP_CAROLIEiJ_G0025613	-	100	98.255	Mus_caroli
MGP_SPRETEiJ_G0026566	Larp7	100	98.604	ENSMUSG00000027968	Larp7	100	98.604	Mus_musculus
MGP_SPRETEiJ_G0026566	Larp7	100	97.557	MGP_PahariEiJ_G0027060	-	100	97.557	Mus_pahari
MGP_SPRETEiJ_G0026566	Larp7	96	81.183	ENSMPUG00000008331	-	95	81.081	Mustela_putorius_furo
MGP_SPRETEiJ_G0026566	Larp7	95	78.022	ENSMPUG00000018052	-	100	78.571	Mustela_putorius_furo
MGP_SPRETEiJ_G0026566	Larp7	87	74.506	ENSMLUG00000027214	LARP7	100	74.506	Myotis_lucifugus
MGP_SPRETEiJ_G0026566	Larp7	100	82.646	ENSNGAG00000007368	-	100	83.162	Nannospalax_galili
MGP_SPRETEiJ_G0026566	Larp7	68	70.667	ENSNBRG00000007968	larp7	72	74.302	Neolamprologus_brichardi
MGP_SPRETEiJ_G0026566	Larp7	96	82.796	ENSNLEG00000016354	LARP7	94	82.342	Nomascus_leucogenys
MGP_SPRETEiJ_G0026566	Larp7	88	71.345	ENSMEUG00000004739	LARP7	100	71.345	Notamacropus_eugenii
MGP_SPRETEiJ_G0026566	Larp7	86	86.466	ENSOPRG00000009594	-	83	86.466	Ochotona_princeps
MGP_SPRETEiJ_G0026566	Larp7	88	89.796	ENSODEG00000011121	LARP7	98	79.024	Octodon_degus
MGP_SPRETEiJ_G0026566	Larp7	96	54.321	ENSONIG00000008763	larp7	95	53.915	Oreochromis_niloticus
MGP_SPRETEiJ_G0026566	Larp7	99	72.605	ENSOANG00000009298	LARP7	94	73.274	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026566	Larp7	100	78.462	ENSOCUG00000007073	LARP7	95	79.317	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026566	Larp7	96	52.269	ENSORLG00000004978	larp7	94	50.977	Oryzias_latipes
MGP_SPRETEiJ_G0026566	Larp7	96	52.450	ENSORLG00020013825	larp7	94	51.155	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026566	Larp7	68	74.667	ENSORLG00015011435	larp7	75	72.222	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026566	Larp7	97	53.237	ENSOMEG00000006920	larp7	94	52.823	Oryzias_melastigma
MGP_SPRETEiJ_G0026566	Larp7	96	83.393	ENSOGAG00000001643	LARP7	95	83.303	Otolemur_garnettii
MGP_SPRETEiJ_G0026566	Larp7	96	81.607	ENSOARG00000001809	LARP7	95	81.508	Ovis_aries
MGP_SPRETEiJ_G0026566	Larp7	96	82.111	ENSPPAG00000038420	LARP7	94	82.014	Pan_paniscus
MGP_SPRETEiJ_G0026566	Larp7	96	81.720	ENSPPRG00000023256	LARP7	95	81.622	Panthera_pardus
MGP_SPRETEiJ_G0026566	Larp7	92	80.899	ENSPTIG00000021146	LARP7	92	80.791	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026566	Larp7	96	82.469	ENSPTRG00000016380	LARP7	95	82.374	Pan_troglodytes
MGP_SPRETEiJ_G0026566	Larp7	96	82.857	ENSPANG00000006701	LARP7	94	82.765	Papio_anubis
MGP_SPRETEiJ_G0026566	Larp7	98	56.799	ENSPKIG00000023484	larp7	94	56.071	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026566	Larp7	87	86.735	ENSPSIG00000014419	LARP7	93	67.908	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026566	Larp7	65	73.611	ENSPMGG00000019887	larp7	82	72.626	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026566	Larp7	100	89.796	ENSPEMG00000013978	-	100	89.966	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026566	Larp7	97	36.796	ENSPMAG00000005362	larp7	92	36.607	Petromyzon_marinus
MGP_SPRETEiJ_G0026566	Larp7	87	86.869	ENSPCIG00000020284	LARP7	98	80.342	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026566	Larp7	98	54.594	ENSPFOG00000000265	larp7	94	52.398	Poecilia_formosa
MGP_SPRETEiJ_G0026566	Larp7	96	82.826	ENSPPYG00000015010	LARP7	95	82.734	Pongo_abelii
MGP_SPRETEiJ_G0026566	Larp7	60	100.000	ENSPCAG00000003373	-	67	100.000	Procavia_capensis
MGP_SPRETEiJ_G0026566	Larp7	68	97.333	ENSPCOG00000023946	LARP7	94	72.797	Propithecus_coquereli
MGP_SPRETEiJ_G0026566	Larp7	100	77.778	ENSPVAG00000000282	LARP7	100	78.462	Pteropus_vampyrus
MGP_SPRETEiJ_G0026566	Larp7	79	67.816	ENSPNYG00000023801	larp7	72	73.743	Pundamilia_nyererei
MGP_SPRETEiJ_G0026566	Larp7	96	52.753	ENSPNAG00000017554	larp7	94	53.667	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026566	Larp7	100	92.334	ENSRNOG00000048989	Larp7	100	92.839	Rattus_norvegicus
MGP_SPRETEiJ_G0026566	Larp7	82	92.593	ENSRBIG00000031916	LARP7	93	92.593	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026566	Larp7	96	82.437	ENSRROG00000033414	LARP7	95	82.342	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026566	Larp7	96	61.717	ENSSBOG00000022652	-	95	61.041	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026566	Larp7	96	83.571	ENSSBOG00000030886	-	95	83.483	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026566	Larp7	87	86.869	ENSSHAG00000008153	LARP7	95	69.912	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026566	Larp7	98	55.786	ENSSFOG00015019344	larp7	94	53.584	Scleropages_formosus
MGP_SPRETEiJ_G0026566	Larp7	88	65.979	ENSSMAG00000011296	larp7	94	54.850	Scophthalmus_maximus
MGP_SPRETEiJ_G0026566	Larp7	86	69.474	ENSSLDG00000005128	larp7	81	75.556	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026566	Larp7	52	74.503	ENSSARG00000000190	-	99	73.377	Sorex_araneus
MGP_SPRETEiJ_G0026566	Larp7	79	75.000	ENSSPAG00000016066	larp7	95	55.417	Stegastes_partitus
MGP_SPRETEiJ_G0026566	Larp7	96	80.287	ENSSSCG00000009119	LARP7	95	80.180	Sus_scrofa
MGP_SPRETEiJ_G0026566	Larp7	88	85.149	ENSTGUG00000001804	LARP7	95	68.873	Taeniopygia_guttata
MGP_SPRETEiJ_G0026566	Larp7	72	79.747	ENSTRUG00000004996	larp7	95	51.282	Takifugu_rubripes
MGP_SPRETEiJ_G0026566	Larp7	98	47.260	ENSTNIG00000007183	larp7	95	47.133	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0026566	Larp7	96	79.391	ENSTBEG00000009188	LARP7	95	79.279	Tupaia_belangeri
MGP_SPRETEiJ_G0026566	Larp7	91	78.030	ENSTTRG00000005233	LARP7	100	77.841	Tursiops_truncatus
MGP_SPRETEiJ_G0026566	Larp7	96	80.824	ENSUAMG00000000836	LARP7	95	80.721	Ursus_americanus
MGP_SPRETEiJ_G0026566	Larp7	95	80.364	ENSUMAG00000002263	LARP7	93	80.256	Ursus_maritimus
MGP_SPRETEiJ_G0026566	Larp7	96	81.250	ENSVPAG00000010502	LARP7	95	81.149	Vicugna_pacos
MGP_SPRETEiJ_G0026566	Larp7	96	81.004	ENSVVUG00000002274	LARP7	95	80.901	Vulpes_vulpes
MGP_SPRETEiJ_G0026566	Larp7	80	83.146	ENSXETG00000024097	larp7	94	61.905	Xenopus_tropicalis
MGP_SPRETEiJ_G0026566	Larp7	98	54.724	ENSXCOG00000004883	larp7	83	72.778	Xiphophorus_couchianus