EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026708 (Gene tree)
Gene ID: -
Gene Symbol: Tyw3
Alias: 5230400J09Rik
Full Name: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19230 bases
Position: chr3:154700051-154719280
Accession: 2445040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0063607	TYW3	PF02676.14	2.6e-57	1	1
MGP_SPRETEiJ_P0063608	TYW3	PF02676.14	3.5e-39	1	1
MGP_SPRETEiJ_P0063610	TYW3	PF02676.14	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0063608	-	3829	-	MGP_SPRETEiJ_P0063608	144 (aa)	-	-
MGP_SPRETEiJ_T0063609	-	628	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0063610	-	488	-	MGP_SPRETEiJ_P0063610	159 (aa)	-	-
MGP_SPRETEiJ_T0063607	-	4049	-	MGP_SPRETEiJ_P0063607	257 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSG00000162623	TYW3	100	89.286	Homo_sapiens
MGP_SPRETEiJ_G0026708	Tyw3	94	64.706	ENSAPOG00000009462	tyw3	74	64.796	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSAMEG00000003461	TYW3	99	70.930	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026708	Tyw3	100	59.722	ENSACIG00000002242	tyw3	92	58.447	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026708	Tyw3	94	61.481	ENSAOCG00000002161	tyw3	73	63.077	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026708	Tyw3	77	46.847	ENSAPEG00000009395	tyw3	96	56.190	Amphiprion_percula
MGP_SPRETEiJ_G0026708	Tyw3	94	59.559	ENSATEG00000004518	tyw3	76	64.246	Anabas_testudineus
MGP_SPRETEiJ_G0026708	Tyw3	94	59.559	ENSATEG00000004411	-	76	64.246	Anabas_testudineus
MGP_SPRETEiJ_G0026708	Tyw3	97	56.954	ENSACAG00000011380	TYW3	88	56.962	Anolis_carolinensis
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSANAG00000034485	TYW3	99	72.093	Aotus_nancymaae
MGP_SPRETEiJ_G0026708	Tyw3	94	61.871	ENSACLG00000022833	tyw3	79	62.105	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026708	Tyw3	100	56.250	ENSAMXG00000039965	tyw3	99	50.588	Astyanax_mexicanus
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSBTAG00000005196	TYW3	99	69.767	Bos_taurus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSCJAG00000006550	TYW3	99	72.374	Callithrix_jacchus
MGP_SPRETEiJ_G0026708	Tyw3	82	69.159	ENSCAFG00000032209	TYW3	99	69.159	Canis_familiaris
MGP_SPRETEiJ_G0026708	Tyw3	99	75.524	ENSCAFG00020017095	TYW3	92	71.206	Canis_lupus_dingo
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSCHIG00000009333	TYW3	99	70.930	Capra_hircus
MGP_SPRETEiJ_G0026708	Tyw3	93	70.539	ENSTSYG00000006369	TYW3	97	70.539	Carlito_syrichta
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSCCAG00000034210	TYW3	99	73.256	Cebus_capucinus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSCATG00000044397	TYW3	98	72.835	Cercocebus_atys
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSCLAG00000004370	TYW3	95	73.643	Chinchilla_lanigera
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSCSAG00000001387	TYW3	98	72.835	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026708	Tyw3	82	76.271	ENSCHOG00000005179	TYW3	68	76.271	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026708	Tyw3	97	63.636	ENSCPBG00000017047	TYW3	99	58.661	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSCANG00000036108	TYW3	98	72.047	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026708	Tyw3	100	87.500	ENSCGRG00001022820	Tyw3	100	87.500	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026708	Tyw3	77	78.894	ENSCGRG00000003132	Tyw3	100	87.209	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026708	Tyw3	100	58.621	ENSCSEG00000021219	tyw3	72	61.386	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026708	Tyw3	95	59.124	ENSCVAG00000003270	tyw3	90	53.419	Cyprinodon_variegatus
MGP_SPRETEiJ_G0026708	Tyw3	96	55.797	ENSDARG00000038222	tyw3	97	48.387	Danio_rerio
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSDNOG00000033863	TYW3	98	72.619	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026708	Tyw3	53	65.468	ENSDORG00000002718	-	99	65.468	Dipodomys_ordii
MGP_SPRETEiJ_G0026708	Tyw3	75	68.657	ENSETEG00000012572	TYW3	98	68.657	Echinops_telfairi
MGP_SPRETEiJ_G0026708	Tyw3	58	53.012	ENSEBUG00000014020	tyw3	54	51.471	Eptatretus_burgeri
MGP_SPRETEiJ_G0026708	Tyw3	100	81.944	ENSEASG00005007776	TYW3	99	73.462	Equus_asinus_asinus
MGP_SPRETEiJ_G0026708	Tyw3	100	81.944	ENSECAG00000007888	TYW3	99	73.462	Equus_caballus
MGP_SPRETEiJ_G0026708	Tyw3	100	61.806	ENSEEUG00000009289	TYW3	98	60.630	Erinaceus_europaeus
MGP_SPRETEiJ_G0026708	Tyw3	97	56.115	ENSELUG00000023000	tyw3	89	55.405	Esox_lucius
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSFCAG00000035340	TYW3	99	72.868	Felis_catus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSFDAG00000003816	TYW3	95	73.469	Fukomys_damarensis
MGP_SPRETEiJ_G0026708	Tyw3	94	60.741	ENSFHEG00000001347	tyw3	79	61.538	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026708	Tyw3	97	60.000	ENSGALG00000032549	TYW3	98	56.371	Gallus_gallus
MGP_SPRETEiJ_G0026708	Tyw3	94	62.222	ENSGAFG00000012457	tyw3	82	59.174	Gambusia_affinis
MGP_SPRETEiJ_G0026708	Tyw3	94	60.000	ENSGACG00000014630	tyw3	86	62.051	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSGGOG00000013676	TYW3	99	70.155	Gorilla_gorilla
MGP_SPRETEiJ_G0026708	Tyw3	72	60.577	ENSHBUG00000007007	-	100	60.577	Haplochromis_burtoni
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSHGLG00000004440	TYW3	99	72.481	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026708	Tyw3	100	70.139	ENSHGLG00100018315	TYW3	99	68.992	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026708	Tyw3	96	53.623	ENSHCOG00000016590	TYW3	98	54.455	Hippocampus_comes
MGP_SPRETEiJ_G0026708	Tyw3	100	57.639	ENSIPUG00000012907	tyw3	67	59.296	Ictalurus_punctatus
MGP_SPRETEiJ_G0026708	Tyw3	89	78.014	ENSSTOG00000028816	TYW3	94	65.891	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026708	Tyw3	100	79.861	ENSJJAG00000005103	-	100	79.861	Jaculus_jaculus
MGP_SPRETEiJ_G0026708	Tyw3	94	64.444	ENSKMAG00000020761	tyw3	70	65.285	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026708	Tyw3	92	59.398	ENSLBEG00000021318	tyw3	74	62.011	Labrus_bergylta
MGP_SPRETEiJ_G0026708	Tyw3	100	57.639	ENSLACG00000012636	TYW3	98	52.549	Latimeria_chalumnae
MGP_SPRETEiJ_G0026708	Tyw3	100	55.556	ENSLOCG00000003437	tyw3	100	50.000	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026708	Tyw3	100	73.611	ENSLAFG00000011373	TYW3	98	70.866	Loxodonta_africana
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSMFAG00000003496	TYW3	98	72.047	Macaca_fascicularis
MGP_SPRETEiJ_G0026708	Tyw3	98	63.386	ENSMMUG00000014595	TYW3	98	63.386	Macaca_mulatta
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSMNEG00000028346	TYW3	98	72.047	Macaca_nemestrina
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSMLEG00000041647	TYW3	98	72.441	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026708	Tyw3	100	59.028	ENSMAMG00000010987	tyw3	76	63.184	Mastacembelus_armatus
MGP_SPRETEiJ_G0026708	Tyw3	98	63.121	ENSMZEG00005023808	tyw3	75	62.687	Maylandia_zebra
MGP_SPRETEiJ_G0026708	Tyw3	65	55.556	ENSMGAG00000012152	TYW3	98	55.556	Meleagris_gallopavo
MGP_SPRETEiJ_G0026708	Tyw3	100	53.696	ENSMAUG00000000522	Tyw3	99	79.070	Mesocricetus_auratus
MGP_SPRETEiJ_G0026708	Tyw3	100	79.861	ENSMICG00000015883	TYW3	97	76.357	Microcebus_murinus
MGP_SPRETEiJ_G0026708	Tyw3	82	80.000	ENSMOCG00000021348	Tyw3	97	80.000	Microtus_ochrogaster
MGP_SPRETEiJ_G0026708	Tyw3	92	61.654	ENSMMOG00000021442	tyw3	89	55.310	Mola_mola
MGP_SPRETEiJ_G0026708	Tyw3	100	71.528	ENSMODG00000019082	TYW3	91	63.780	Monodelphis_domestica
MGP_SPRETEiJ_G0026708	Tyw3	100	60.417	ENSMALG00000014442	tyw3	75	63.184	Monopterus_albus
MGP_SPRETEiJ_G0026708	Tyw3	100	98.611	MGP_CAROLIEiJ_G0025755	Tyw3	100	98.611	Mus_caroli
MGP_SPRETEiJ_G0026708	Tyw3	100	99.371	ENSMUSG00000047583	Tyw3	100	99.371	Mus_musculus
MGP_SPRETEiJ_G0026708	Tyw3	100	95.139	MGP_PahariEiJ_G0027206	Tyw3	100	95.139	Mus_pahari
MGP_SPRETEiJ_G0026708	Tyw3	100	79.861	ENSMPUG00000010967	TYW3	99	71.705	Mustela_putorius_furo
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSMLUG00000005999	TYW3	99	71.042	Myotis_lucifugus
MGP_SPRETEiJ_G0026708	Tyw3	100	80.556	ENSNGAG00000000586	-	99	80.556	Nannospalax_galili
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSNLEG00000009556	TYW3	99	73.152	Nomascus_leucogenys
MGP_SPRETEiJ_G0026708	Tyw3	82	74.576	ENSOPRG00000014182	TYW3	99	52.713	Ochotona_princeps
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSODEG00000005361	TYW3	99	77.778	Octodon_degus
MGP_SPRETEiJ_G0026708	Tyw3	100	61.806	ENSONIG00000019965	tyw3	100	62.814	Oreochromis_niloticus
MGP_SPRETEiJ_G0026708	Tyw3	74	58.639	ENSOANG00000002172	-	95	58.639	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026708	Tyw3	100	74.306	ENSOCUG00000003043	TYW3	99	69.767	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026708	Tyw3	96	58.696	ENSORLG00000004470	tyw3	96	53.659	Oryzias_latipes
MGP_SPRETEiJ_G0026708	Tyw3	96	57.971	ENSORLG00020003793	tyw3	96	53.252	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026708	Tyw3	96	59.420	ENSORLG00015006950	tyw3	96	53.659	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026708	Tyw3	94	62.222	ENSOMEG00000016176	tyw3	95	61.111	Oryzias_melastigma
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSOGAG00000011590	-	95	73.878	Otolemur_garnettii
MGP_SPRETEiJ_G0026708	Tyw3	100	68.966	ENSOGAG00000025029	-	99	66.667	Otolemur_garnettii
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSOARG00000012508	TYW3	99	70.155	Ovis_aries
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSPPAG00000043438	TYW3	99	70.543	Pan_paniscus
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSPPRG00000023209	TYW3	99	73.438	Panthera_pardus
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSPTIG00000017448	TYW3	99	72.481	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSPTRG00000000867	TYW3	99	70.543	Pan_troglodytes
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSPANG00000013397	TYW3	98	72.835	Papio_anubis
MGP_SPRETEiJ_G0026708	Tyw3	94	50.314	ENSPKIG00000009802	tyw3	92	48.837	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026708	Tyw3	65	61.538	ENSPSIG00000008432	TYW3	99	61.538	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026708	Tyw3	94	58.088	ENSPMGG00000005290	tyw3	79	56.284	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026708	Tyw3	100	93.056	ENSPEMG00000013100	Tyw3	100	93.056	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSPCIG00000024204	TYW3	80	68.595	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026708	Tyw3	98	61.702	ENSPFOG00000000927	tyw3	85	57.642	Poecilia_formosa
MGP_SPRETEiJ_G0026708	Tyw3	98	61.702	ENSPLAG00000009891	tyw3	85	57.205	Poecilia_latipinna
MGP_SPRETEiJ_G0026708	Tyw3	98	61.702	ENSPMEG00000002006	tyw3	81	67.241	Poecilia_mexicana
MGP_SPRETEiJ_G0026708	Tyw3	98	59.574	ENSPREG00000012341	tyw3	85	56.332	Poecilia_reticulata
MGP_SPRETEiJ_G0026708	Tyw3	100	77.083	ENSPPYG00000001234	TYW3	99	72.093	Pongo_abelii
MGP_SPRETEiJ_G0026708	Tyw3	100	73.611	ENSPCAG00000000524	TYW3	99	70.428	Procavia_capensis
MGP_SPRETEiJ_G0026708	Tyw3	100	80.556	ENSPCOG00000023207	TYW3	97	76.744	Propithecus_coquereli
MGP_SPRETEiJ_G0026708	Tyw3	100	75.694	ENSPVAG00000002356	TYW3	99	69.141	Pteropus_vampyrus
MGP_SPRETEiJ_G0026708	Tyw3	98	61.379	ENSPNYG00000017982	tyw3	63	61.084	Pundamilia_nyererei
MGP_SPRETEiJ_G0026708	Tyw3	100	56.944	ENSPNAG00000028431	tyw3	99	51.779	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026708	Tyw3	100	93.056	ENSRNOG00000028328	Tyw3	88	88.372	Rattus_norvegicus
MGP_SPRETEiJ_G0026708	Tyw3	52	70.149	ENSRBIG00000040137	-	97	70.149	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026708	Tyw3	100	74.306	ENSRROG00000034171	TYW3	98	71.260	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026708	Tyw3	81	33.562	YGL050W	-	88	30.279	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0026708	Tyw3	100	76.389	ENSSBOG00000022917	TYW3	99	72.374	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026708	Tyw3	99	58.451	ENSSFOG00015021842	tyw3	92	52.101	Scleropages_formosus
MGP_SPRETEiJ_G0026708	Tyw3	98	59.574	ENSSMAG00000019609	tyw3	79	62.189	Scophthalmus_maximus
MGP_SPRETEiJ_G0026708	Tyw3	96	61.594	ENSSDUG00000003674	tyw3	73	64.103	Seriola_dumerili
MGP_SPRETEiJ_G0026708	Tyw3	96	61.594	ENSSLDG00000010425	tyw3	85	58.667	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026708	Tyw3	76	65.306	ENSSARG00000001097	TYW3	98	65.306	Sorex_araneus
MGP_SPRETEiJ_G0026708	Tyw3	97	62.238	ENSSPUG00000007880	TYW3	98	57.708	Sphenodon_punctatus
MGP_SPRETEiJ_G0026708	Tyw3	94	61.765	ENSSPAG00000013786	tyw3	71	63.776	Stegastes_partitus
MGP_SPRETEiJ_G0026708	Tyw3	100	74.306	ENSSSCG00000003779	TYW3	99	68.966	Sus_scrofa
MGP_SPRETEiJ_G0026708	Tyw3	97	60.432	ENSTRUG00000023563	tyw3	89	56.067	Takifugu_rubripes
MGP_SPRETEiJ_G0026708	Tyw3	97	58.993	ENSTNIG00000003368	tyw3	97	61.257	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSTBEG00000017002	TYW3	95	74.694	Tupaia_belangeri
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSTTRG00000010464	TYW3	99	73.563	Tursiops_truncatus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSUAMG00000010803	TYW3	99	72.222	Ursus_americanus
MGP_SPRETEiJ_G0026708	Tyw3	100	77.778	ENSUMAG00000006460	TYW3	98	72.510	Ursus_maritimus
MGP_SPRETEiJ_G0026708	Tyw3	100	78.472	ENSVPAG00000006900	TYW3	99	82.162	Vicugna_pacos
MGP_SPRETEiJ_G0026708	Tyw3	99	75.524	ENSVVUG00000006902	TYW3	92	70.428	Vulpes_vulpes
MGP_SPRETEiJ_G0026708	Tyw3	100	59.028	ENSXETG00000002996	tyw3	88	57.658	Xenopus_tropicalis
MGP_SPRETEiJ_G0026708	Tyw3	98	61.972	ENSXCOG00000000715	tyw3	73	64.021	Xiphophorus_couchianus
MGP_SPRETEiJ_G0026708	Tyw3	98	61.972	ENSXMAG00000006464	tyw3	76	64.021	Xiphophorus_maculatus