EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026726 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 41322 bases
Position: chr4:39684-81005
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0063718	Methyltransf_15	PF09445.10	1.8e-30	1	1
MGP_SPRETEiJ_P0063718	UPF0020	PF01170.18	1.3e-05	1	1
MGP_SPRETEiJ_P0063718	Met_10	PF02475.16	2.3e-06	1	1
MGP_SPRETEiJ_P0063718	Methyltransf_31	PF13847.6	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0063718	-	2965	-	MGP_SPRETEiJ_P0063718	496 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0026726	-	98	96.809	MGP_SPRETEiJ_G0026727	-	60	96.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026726	-	94	84.332	ENSG00000137574	TGS1	57	84.332	Homo_sapiens
MGP_SPRETEiJ_G0026726	-	94	84.862	ENSAMEG00000001781	TGS1	58	84.862	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026726	-	79	63.556	ENSAOCG00000022799	lyn	50	65.278	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026726	-	79	63.556	ENSAPEG00000019723	TGS1	54	73.418	Amphiprion_percula
MGP_SPRETEiJ_G0026726	-	78	79.630	ENSAPLG00000006073	-	58	81.132	Anas_platyrhynchos
MGP_SPRETEiJ_G0026726	-	93	70.968	ENSACAG00000017988	TGS1	51	70.968	Anolis_carolinensis
MGP_SPRETEiJ_G0026726	-	85	87.037	ENSANAG00000035525	TGS1	55	87.037	Aotus_nancymaae
MGP_SPRETEiJ_G0026726	-	97	66.221	ENSBTAG00000005898	TGS1	66	66.221	Bos_taurus
MGP_SPRETEiJ_G0026726	-	90	83.871	ENSCJAG00000016657	TGS1	57	83.871	Callithrix_jacchus
MGP_SPRETEiJ_G0026726	-	93	84.862	ENSCAFG00000007011	TGS1	57	84.862	Canis_familiaris
MGP_SPRETEiJ_G0026726	-	93	87.019	ENSCAFG00020015485	TGS1	57	87.019	Canis_lupus_dingo
MGP_SPRETEiJ_G0026726	-	93	65.217	ENSCHIG00000013976	TGS1	66	65.217	Capra_hircus
MGP_SPRETEiJ_G0026726	-	94	82.949	ENSTSYG00000000171	TGS1	57	82.949	Carlito_syrichta
MGP_SPRETEiJ_G0026726	-	97	64.873	ENSCAPG00000013732	TGS1	62	84.651	Cavia_aperea
MGP_SPRETEiJ_G0026726	-	94	82.488	ENSCPOG00000009713	TGS1	57	82.488	Cavia_porcellus
MGP_SPRETEiJ_G0026726	-	96	83.410	ENSCCAG00000030476	TGS1	57	83.410	Cebus_capucinus
MGP_SPRETEiJ_G0026726	-	97	83.051	ENSCATG00000035375	TGS1	57	84.793	Cercocebus_atys
MGP_SPRETEiJ_G0026726	-	94	82.028	ENSCLAG00000009468	TGS1	57	82.028	Chinchilla_lanigera
MGP_SPRETEiJ_G0026726	-	86	96.226	ENSCSAG00000014611	TGS1	54	96.226	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026726	-	94	82.028	ENSCHOG00000001462	TGS1	57	82.028	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026726	-	92	76.168	ENSCPBG00000004958	TGS1	56	76.168	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSCANG00000041389	TGS1	57	84.793	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026726	-	99	86.222	ENSCGRG00001019470	Tgs1	58	86.937	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026726	-	98	83.628	ENSCGRG00000008981	Tgs1	58	83.628	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026726	-	62	65.116	ENSDARG00000107511	lyn	99	61.667	Danio_rerio
MGP_SPRETEiJ_G0026726	-	94	83.258	ENSDNOG00000008353	TGS1	57	83.945	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026726	-	94	86.301	ENSDORG00000012484	Tgs1	57	87.037	Dipodomys_ordii
MGP_SPRETEiJ_G0026726	-	79	35.240	FBgn0266195	Tgs1	91	34.240	Drosophila_melanogaster
MGP_SPRETEiJ_G0026726	-	88	90.116	ENSEASG00005016371	TGS1	53	91.124	Equus_asinus_asinus
MGP_SPRETEiJ_G0026726	-	86	94.304	ENSECAG00000019399	TGS1	53	95.484	Equus_caballus
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSFCAG00000011478	TGS1	57	84.793	Felis_catus
MGP_SPRETEiJ_G0026726	-	70	69.725	ENSFALG00000010249	TGS1	62	70.698	Ficedula_albicollis
MGP_SPRETEiJ_G0026726	-	97	80.932	ENSFDAG00000011405	TGS1	57	81.567	Fukomys_damarensis
MGP_SPRETEiJ_G0026726	-	78	70.968	ENSGALG00000015340	TGS1	56	71.628	Gallus_gallus
MGP_SPRETEiJ_G0026726	-	93	74.654	ENSGAGG00000019590	TGS1	56	74.654	Gopherus_agassizii
MGP_SPRETEiJ_G0026726	-	94	84.332	ENSGGOG00000008624	TGS1	57	84.332	Gorilla_gorilla
MGP_SPRETEiJ_G0026726	-	70	65.581	ENSHCOG00000014161	lyn	53	65.581	Hippocampus_comes
MGP_SPRETEiJ_G0026726	-	84	65.581	ENSIPUG00000002294	tgs1	54	59.036	Ictalurus_punctatus
MGP_SPRETEiJ_G0026726	-	93	62.874	ENSSTOG00000009597	TGS1	70	62.874	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026726	-	94	86.385	ENSJJAG00000016239	Tgs1	58	86.385	Jaculus_jaculus
MGP_SPRETEiJ_G0026726	-	72	66.822	ENSLBEG00000027341	-	53	66.822	Labrus_bergylta
MGP_SPRETEiJ_G0026726	-	78	71.759	ENSLOCG00000005492	lyn	52	71.759	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026726	-	97	77.872	ENSLAFG00000015386	TGS1	58	80.365	Loxodonta_africana
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSMFAG00000029838	TGS1	57	84.793	Macaca_fascicularis
MGP_SPRETEiJ_G0026726	-	94	88.263	ENSMMUG00000005478	TGS1	57	88.263	Macaca_mulatta
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSMNEG00000023719	TGS1	57	84.793	Macaca_nemestrina
MGP_SPRETEiJ_G0026726	-	96	84.793	ENSMLEG00000034807	TGS1	57	84.793	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026726	-	90	72.018	ENSMGAG00000010966	TGS1	64	72.685	Meleagris_gallopavo
MGP_SPRETEiJ_G0026726	-	96	87.111	ENSMAUG00000009875	Tgs1	58	87.387	Mesocricetus_auratus
MGP_SPRETEiJ_G0026726	-	94	84.545	ENSMICG00000011199	TGS1	57	85.253	Microcebus_murinus
MGP_SPRETEiJ_G0026726	-	97	84.163	ENSMOCG00000019560	Tgs1	58	84.862	Microtus_ochrogaster
MGP_SPRETEiJ_G0026726	-	93	80.275	ENSMODG00000009174	TGS1	64	80.930	Monodelphis_domestica
MGP_SPRETEiJ_G0026726	-	77	63.333	ENSMALG00000021440	lyn	51	67.442	Monopterus_albus
MGP_SPRETEiJ_G0026726	-	99	99.052	MGP_CAROLIEiJ_G0025780	-	59	99.052	Mus_caroli
MGP_SPRETEiJ_G0026726	-	98	94.326	MGP_CAROLIEiJ_G0025779	-	58	97.398	Mus_caroli
MGP_SPRETEiJ_G0026726	-	98	94.681	ENSMUSG00000028233	Tgs1	58	97.770	Mus_musculus
MGP_SPRETEiJ_G0026726	-	99	98.551	MGP_PahariEiJ_G0023902	-	58	98.537	Mus_pahari
MGP_SPRETEiJ_G0026726	-	99	88.298	MGP_PahariEiJ_G0023901	-	58	91.450	Mus_pahari
MGP_SPRETEiJ_G0026726	-	86	95.570	ENSMPUG00000010475	TGS1	54	95.570	Mustela_putorius_furo
MGP_SPRETEiJ_G0026726	-	97	83.945	ENSMLUG00000014857	TGS1	57	83.945	Myotis_lucifugus
MGP_SPRETEiJ_G0026726	-	94	85.909	ENSNGAG00000019532	Tgs1	57	86.175	Nannospalax_galili
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSNLEG00000001101	TGS1	57	84.793	Nomascus_leucogenys
MGP_SPRETEiJ_G0026726	-	94	80.455	ENSMEUG00000001697	TGS1	62	81.106	Notamacropus_eugenii
MGP_SPRETEiJ_G0026726	-	89	87.640	ENSODEG00000002948	TGS1	57	92.357	Octodon_degus
MGP_SPRETEiJ_G0026726	-	94	78.636	ENSOANG00000021853	TGS1	63	79.263	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026726	-	94	83.105	ENSOCUG00000017522	TGS1	58	83.028	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026726	-	97	76.172	ENSOGAG00000012572	TGS1	58	83.636	Otolemur_garnettii
MGP_SPRETEiJ_G0026726	-	89	78.899	ENSOARG00000014613	TGS1	57	78.899	Ovis_aries
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSPPAG00000039058	TGS1	57	84.793	Pan_paniscus
MGP_SPRETEiJ_G0026726	-	94	84.332	ENSPPRG00000000677	TGS1	57	84.332	Panthera_pardus
MGP_SPRETEiJ_G0026726	-	94	84.332	ENSPTIG00000005122	TGS1	57	84.332	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026726	-	94	84.793	ENSPTRG00000020262	TGS1	57	84.793	Pan_troglodytes
MGP_SPRETEiJ_G0026726	-	96	84.332	ENSPANG00000018910	TGS1	57	84.332	Papio_anubis
MGP_SPRETEiJ_G0026726	-	92	75.814	ENSPSIG00000014983	TGS1	56	75.814	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026726	-	55	61.739	ENSPMGG00000012711	lyn	50	64.253	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026726	-	99	86.667	ENSPEMG00000007957	Tgs1	58	86.937	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026726	-	97	80.000	ENSPCIG00000016232	TGS1	58	80.645	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026726	-	79	62.288	ENSPFOG00000001545	-	64	65.278	Poecilia_formosa
MGP_SPRETEiJ_G0026726	-	86	96.226	ENSPPYG00000018597	TGS1	54	96.226	Pongo_abelii
MGP_SPRETEiJ_G0026726	-	94	80.000	ENSPCAG00000000143	TGS1	58	80.645	Procavia_capensis
MGP_SPRETEiJ_G0026726	-	94	82.727	ENSPCOG00000013537	TGS1	57	83.410	Propithecus_coquereli
MGP_SPRETEiJ_G0026726	-	94	80.543	ENSPVAG00000016399	TGS1	57	81.567	Pteropus_vampyrus
MGP_SPRETEiJ_G0026726	-	97	85.520	ENSRNOG00000008156	Tgs1	57	86.989	Rattus_norvegicus
MGP_SPRETEiJ_G0026726	-	94	86.364	ENSRBIG00000041893	TGS1	58	87.037	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026726	-	86	96.226	ENSRROG00000035127	TGS1	51	96.226	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026726	-	89	95.031	ENSSBOG00000024469	TGS1	54	95.597	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026726	-	86	90.566	ENSSHAG00000012878	TGS1	54	91.083	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026726	-	87	66.355	ENSSFOG00015001308	tgs1	52	66.355	Scleropages_formosus
MGP_SPRETEiJ_G0026726	-	51	67.117	ENSSLDG00000009024	lyn	70	67.117	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026726	-	82	92.647	ENSSSCG00000006251	TGS1	54	92.647	Sus_scrofa
MGP_SPRETEiJ_G0026726	-	88	72.685	ENSTGUG00000011050	TGS1	59	74.178	Taeniopygia_guttata
MGP_SPRETEiJ_G0026726	-	95	78.475	ENSTTRG00000017239	TGS1	57	79.724	Tursiops_truncatus
MGP_SPRETEiJ_G0026726	-	94	86.538	ENSUAMG00000027718	TGS1	57	86.538	Ursus_americanus
MGP_SPRETEiJ_G0026726	-	86	95.541	ENSUMAG00000009761	TGS1	54	94.937	Ursus_maritimus
MGP_SPRETEiJ_G0026726	-	89	81.651	ENSVPAG00000001166	TGS1	57	81.651	Vicugna_pacos
MGP_SPRETEiJ_G0026726	-	86	96.203	ENSVVUG00000017821	TGS1	54	96.203	Vulpes_vulpes
MGP_SPRETEiJ_G0026726	-	93	70.642	ENSXETG00000005648	tgs1	56	70.642	Xenopus_tropicalis