EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026765 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 15792 bases
Position: chr4:8669220-8685011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0063906	RRM_1	PF00076.22	1.2e-32	1	3
MGP_SPRETEiJ_P0063906	RRM_1	PF00076.22	1.2e-32	2	3
MGP_SPRETEiJ_P0063906	RRM_1	PF00076.22	1.2e-32	3	3
MGP_SPRETEiJ_P0063907	RRM_1	PF00076.22	1.2e-32	1	3
MGP_SPRETEiJ_P0063907	RRM_1	PF00076.22	1.2e-32	2	3
MGP_SPRETEiJ_P0063907	RRM_1	PF00076.22	1.2e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0063907	-	3610	-	MGP_SPRETEiJ_P0063907	914 (aa)	-	-
MGP_SPRETEiJ_T0063906	-	3433	-	MGP_SPRETEiJ_P0063906	914 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0026765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0026765	-	100	88.197	MGP_SPRETEiJ_G0026766	-	100	90.700
MGP_SPRETEiJ_G0026765	-	56	71.264	MGP_SPRETEiJ_G0025473	Rbm12	56	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026765	-	100	70.550	ENSG00000183808	RBM12B	100	95.122	Homo_sapiens
MGP_SPRETEiJ_G0026765	-	73	37.624	ENSAPOG00000013963	rbm12b	96	37.624	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026765	-	100	68.221	ENSAMEG00000007134	RBM12B	100	69.306	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026765	-	60	38.462	ENSACIG00000014943	rbm12b	99	39.441	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026765	-	67	39.723	ENSAOCG00000024270	rbm12b	95	39.489	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026765	-	60	47.692	ENSAPEG00000022079	rbm12b	97	39.818	Amphiprion_percula
MGP_SPRETEiJ_G0026765	-	61	50.000	ENSATEG00000004578	rbm12b	85	50.000	Anabas_testudineus
MGP_SPRETEiJ_G0026765	-	78	54.362	ENSAPLG00000002020	RBM12B	100	54.362	Anas_platyrhynchos
MGP_SPRETEiJ_G0026765	-	80	41.607	ENSACAG00000003463	RBM12B	72	41.607	Anolis_carolinensis
MGP_SPRETEiJ_G0026765	-	100	67.749	ENSANAG00000034015	RBM12B	100	69.575	Aotus_nancymaae
MGP_SPRETEiJ_G0026765	-	67	39.600	ENSACLG00000005575	rbm12b	93	39.600	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026765	-	64	38.406	ENSACLG00000005578	rbm12b	96	38.406	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026765	-	61	42.254	ENSAMXG00000041973	rbm12b	87	42.254	Astyanax_mexicanus
MGP_SPRETEiJ_G0026765	-	100	68.608	ENSBTAG00000013408	RBM12B	100	69.114	Bos_taurus
MGP_SPRETEiJ_G0026765	-	100	67.233	ENSCAFG00000009109	RBM12B	100	64.966	Canis_familiaris
MGP_SPRETEiJ_G0026765	-	100	68.757	ENSCAFG00020012203	RBM12B	100	70.410	Canis_lupus_dingo
MGP_SPRETEiJ_G0026765	-	85	75.191	ENSCHIG00000006790	RBM12B	88	75.191	Capra_hircus
MGP_SPRETEiJ_G0026765	-	100	68.012	ENSTSYG00000012515	RBM12B	100	65.644	Carlito_syrichta
MGP_SPRETEiJ_G0026765	-	100	70.772	ENSCAPG00000003543	RBM12B	100	70.668	Cavia_aperea
MGP_SPRETEiJ_G0026765	-	100	70.772	ENSCPOG00000007815	RBM12B	100	70.668	Cavia_porcellus
MGP_SPRETEiJ_G0026765	-	100	67.961	ENSCATG00000030769	RBM12B	100	69.504	Cercocebus_atys
MGP_SPRETEiJ_G0026765	-	100	70.668	ENSCLAG00000017617	RBM12B	100	70.564	Chinchilla_lanigera
MGP_SPRETEiJ_G0026765	-	100	67.331	ENSCSAG00000018559	RBM12B	100	70.277	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026765	-	98	68.029	ENSCHOG00000008934	RBM12B	100	66.736	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026765	-	78	53.976	ENSCPBG00000003061	RBM12B	100	53.976	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026765	-	100	67.568	ENSCANG00000030379	RBM12B	100	69.828	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026765	-	100	73.043	ENSCGRG00001008710	-	97	72.492	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026765	-	67	43.878	ENSCSEG00000004610	rbm12b	84	43.878	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026765	-	61	48.000	ENSCVAG00000011047	rbm12b	86	48.000	Cyprinodon_variegatus
MGP_SPRETEiJ_G0026765	-	53	30.074	ENSDARG00000055889	zgc:153215	99	30.074	Danio_rerio
MGP_SPRETEiJ_G0026765	-	63	39.394	ENSDARG00000079717	rbm12b	82	40.726	Danio_rerio
MGP_SPRETEiJ_G0026765	-	100	66.236	ENSDNOG00000041608	RBM12B	100	63.556	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026765	-	100	67.975	ENSDORG00000024034	-	100	66.982	Dipodomys_ordii
MGP_SPRETEiJ_G0026765	-	87	64.431	ENSETEG00000013005	-	86	64.899	Echinops_telfairi
MGP_SPRETEiJ_G0026765	-	100	68.757	ENSEASG00005016297	RBM12B	100	70.194	Equus_asinus_asinus
MGP_SPRETEiJ_G0026765	-	100	68.566	ENSECAG00000017870	RBM12B	100	67.210	Equus_caballus
MGP_SPRETEiJ_G0026765	-	100	68.575	ENSFCAG00000029274	RBM12B	100	69.978	Felis_catus
MGP_SPRETEiJ_G0026765	-	78	52.349	ENSFALG00000014893	RBM12B	100	52.349	Ficedula_albicollis
MGP_SPRETEiJ_G0026765	-	100	69.811	ENSFDAG00000005576	RBM12B	97	69.811	Fukomys_damarensis
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSFHEG00000016425	rbm12b	85	46.667	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026765	-	63	51.429	ENSGMOG00000013467	rbm12b	89	51.429	Gadus_morhua
MGP_SPRETEiJ_G0026765	-	78	55.034	ENSGALG00000035129	RBM12B	100	55.034	Gallus_gallus
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSGAFG00000007224	rbm12b	86	46.667	Gambusia_affinis
MGP_SPRETEiJ_G0026765	-	52	30.078	ENSGAFG00000007845	zgc:153215	98	30.078	Gambusia_affinis
MGP_SPRETEiJ_G0026765	-	64	43.878	ENSGACG00000008682	rbm12b	88	43.878	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026765	-	75	56.250	ENSGAGG00000009774	RBM12B	100	56.250	Gopherus_agassizii
MGP_SPRETEiJ_G0026765	-	100	71.630	ENSGGOG00000011909	RBM12B	100	71.630	Gorilla_gorilla
MGP_SPRETEiJ_G0026765	-	65	49.333	ENSHBUG00000016227	rbm12b	88	49.333	Haplochromis_burtoni
MGP_SPRETEiJ_G0026765	-	100	69.493	ENSHGLG00000009063	RBM12B	100	68.335	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026765	-	100	69.493	ENSHGLG00100021324	RBM12B	100	68.335	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026765	-	61	49.333	ENSHCOG00000014952	rbm12b	89	49.333	Hippocampus_comes
MGP_SPRETEiJ_G0026765	-	53	30.147	ENSIPUG00000019731	zgc:153215	99	30.147	Ictalurus_punctatus
MGP_SPRETEiJ_G0026765	-	70	47.191	ENSIPUG00000001167	RBM12B	94	47.191	Ictalurus_punctatus
MGP_SPRETEiJ_G0026765	-	100	71.786	ENSSTOG00000027445	RBM12B	100	72.331	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026765	-	100	69.189	ENSJJAG00000004165	-	100	70.054	Jaculus_jaculus
MGP_SPRETEiJ_G0026765	-	63	46.591	ENSKMAG00000013704	rbm12b	84	46.591	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026765	-	63	46.591	ENSKMAG00000013715	rbm12b	88	46.591	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026765	-	64	63.636	ENSLACG00000007177	RBM12B	95	51.351	Latimeria_chalumnae
MGP_SPRETEiJ_G0026765	-	61	52.000	ENSLOCG00000018344	rbm12b	86	52.000	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026765	-	100	64.309	ENSLAFG00000029949	RBM12B	100	65.180	Loxodonta_africana
MGP_SPRETEiJ_G0026765	-	100	67.676	ENSMFAG00000045430	RBM12B	100	69.935	Macaca_fascicularis
MGP_SPRETEiJ_G0026765	-	100	70.658	ENSMMUG00000005558	RBM12B	100	70.518	Macaca_mulatta
MGP_SPRETEiJ_G0026765	-	100	67.676	ENSMNEG00000041292	RBM12B	100	69.935	Macaca_nemestrina
MGP_SPRETEiJ_G0026765	-	100	71.164	ENSMLEG00000037288	RBM12B	100	71.164	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026765	-	53	30.151	ENSMAMG00000012038	zgc:153215	95	30.151	Mastacembelus_armatus
MGP_SPRETEiJ_G0026765	-	67	45.918	ENSMAMG00000011998	rbm12b	95	43.058	Mastacembelus_armatus
MGP_SPRETEiJ_G0026765	-	67	39.243	ENSMZEG00005015005	rbm12b	95	39.243	Maylandia_zebra
MGP_SPRETEiJ_G0026765	-	67	38.406	ENSMZEG00005014845	rbm12b	94	37.778	Maylandia_zebra
MGP_SPRETEiJ_G0026765	-	54	57.722	ENSMGAG00000011985	RBM12B	99	57.722	Meleagris_gallopavo
MGP_SPRETEiJ_G0026765	-	100	70.531	ENSMAUG00000021752	-	100	72.343	Mesocricetus_auratus
MGP_SPRETEiJ_G0026765	-	100	67.822	ENSMICG00000036969	RBM12B	100	70.261	Microcebus_murinus
MGP_SPRETEiJ_G0026765	-	100	72.616	ENSMOCG00000005603	-	100	69.029	Microtus_ochrogaster
MGP_SPRETEiJ_G0026765	-	55	65.854	ENSMMOG00000002404	rbm12b	81	65.854	Mola_mola
MGP_SPRETEiJ_G0026765	-	86	60.543	ENSMODG00000007436	RBM12B	98	60.863	Monodelphis_domestica
MGP_SPRETEiJ_G0026765	-	54	30.273	ENSMALG00000001222	zgc:153215	99	30.273	Monopterus_albus
MGP_SPRETEiJ_G0026765	-	67	48.000	ENSMALG00000012059	rbm12b	90	48.000	Monopterus_albus
MGP_SPRETEiJ_G0026765	-	100	86.448	ENSMUSG00000052137	Rbm12b2	100	89.387	Mus_musculus
MGP_SPRETEiJ_G0026765	-	100	85.137	ENSMUSG00000046667	Rbm12b1	100	87.746	Mus_musculus
MGP_SPRETEiJ_G0026765	-	100	66.932	ENSMPUG00000018637	RBM12B	100	64.573	Mustela_putorius_furo
MGP_SPRETEiJ_G0026765	-	100	65.432	ENSMLUG00000002359	RBM12B	100	62.220	Myotis_lucifugus
MGP_SPRETEiJ_G0026765	-	100	71.310	ENSNGAG00000002801	-	100	67.824	Nannospalax_galili
MGP_SPRETEiJ_G0026765	-	67	39.600	ENSNBRG00000015057	rbm12b	95	39.600	Neolamprologus_brichardi
MGP_SPRETEiJ_G0026765	-	100	70.797	ENSNLEG00000032050	RBM12B	100	70.797	Nomascus_leucogenys
MGP_SPRETEiJ_G0026765	-	100	69.906	ENSODEG00000019204	RBM12B	100	65.612	Octodon_degus
MGP_SPRETEiJ_G0026765	-	61	49.333	ENSONIG00000020612	rbm12b	86	49.333	Oreochromis_niloticus
MGP_SPRETEiJ_G0026765	-	78	57.333	ENSOANG00000015735	-	97	57.333	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026765	-	100	66.844	ENSOCUG00000010353	RBM12B	100	69.305	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026765	-	62	49.333	ENSORLG00000008228	rbm12b	84	49.333	Oryzias_latipes
MGP_SPRETEiJ_G0026765	-	62	49.333	ENSORLG00020013619	rbm12b	84	49.333	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026765	-	62	49.333	ENSORLG00015019999	rbm12b	84	49.333	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026765	-	61	49.333	ENSOMEG00000022523	rbm12b	83	49.333	Oryzias_melastigma
MGP_SPRETEiJ_G0026765	-	100	67.742	ENSOGAG00000002979	RBM12B	100	66.201	Otolemur_garnettii
MGP_SPRETEiJ_G0026765	-	100	68.438	ENSPTIG00000020071	RBM12B	100	70.838	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026765	-	100	70.550	ENSPTRG00000020420	RBM12B	100	70.734	Pan_troglodytes
MGP_SPRETEiJ_G0026765	-	100	71.243	ENSPANG00000035535	RBM12B	100	71.243	Papio_anubis
MGP_SPRETEiJ_G0026765	-	52	33.398	ENSPKIG00000014851	zgc:153215	98	33.398	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026765	-	62	49.333	ENSPKIG00000018719	rbm12b	85	49.333	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026765	-	75	55.039	ENSPSIG00000001348	RBM12B	100	55.039	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026765	-	100	71.444	ENSPEMG00000008279	-	100	73.139	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026765	-	86	60.925	ENSPCIG00000008556	RBM12B	100	61.404	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSPFOG00000020937	rbm12b	82	46.667	Poecilia_formosa
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSPLAG00000018782	rbm12b	86	46.667	Poecilia_latipinna
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSPMEG00000011418	rbm12b	86	46.667	Poecilia_mexicana
MGP_SPRETEiJ_G0026765	-	61	46.667	ENSPREG00000020770	rbm12b	86	46.667	Poecilia_reticulata
MGP_SPRETEiJ_G0026765	-	53	30.303	ENSPREG00000018608	zgc:153215	100	30.303	Poecilia_reticulata
MGP_SPRETEiJ_G0026765	-	100	67.131	ENSPPYG00000018745	RBM12B	100	63.148	Pongo_abelii
MGP_SPRETEiJ_G0026765	-	100	68.556	ENSPCOG00000023546	RBM12B	100	71.382	Propithecus_coquereli
MGP_SPRETEiJ_G0026765	-	100	70.043	ENSPVAG00000011803	RBM12B	100	70.043	Pteropus_vampyrus
MGP_SPRETEiJ_G0026765	-	67	39.351	ENSPNYG00000016696	rbm12b	95	39.351	Pundamilia_nyererei
MGP_SPRETEiJ_G0026765	-	53	31.047	ENSPNAG00000025628	zgc:153215	99	31.047	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026765	-	61	49.296	ENSPNAG00000008126	rbm12b	83	49.296	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026765	-	89	76.606	ENSRNOG00000055292	LOC679087	100	77.791	Rattus_norvegicus
MGP_SPRETEiJ_G0026765	-	100	77.874	ENSRNOG00000016330	Rbm12b	100	78.936	Rattus_norvegicus
MGP_SPRETEiJ_G0026765	-	100	71.030	ENSRBIG00000035046	RBM12B	100	71.030	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026765	-	100	67.064	ENSRROG00000023660	RBM12B	100	68.501	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026765	-	100	70.302	ENSSBOG00000027592	RBM12B	100	70.302	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026765	-	86	60.703	ENSSHAG00000015335	RBM12B	100	61.182	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026765	-	61	50.685	ENSSFOG00015001584	rbm12b	85	50.685	Scleropages_formosus
MGP_SPRETEiJ_G0026765	-	53	33.267	ENSSFOG00015009427	zgc:153215	99	33.267	Scleropages_formosus
MGP_SPRETEiJ_G0026765	-	67	42.052	ENSSMAG00000019708	rbm12b	95	42.052	Scophthalmus_maximus
MGP_SPRETEiJ_G0026765	-	67	42.063	ENSSDUG00000006856	rbm12b	95	42.063	Seriola_dumerili
MGP_SPRETEiJ_G0026765	-	66	41.700	ENSSLDG00000016156	rbm12b	93	41.700	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026765	-	81	70.560	ENSSARG00000011845	-	84	70.560	Sorex_araneus
MGP_SPRETEiJ_G0026765	-	53	52.713	ENSSPUG00000016954	RBM12B	91	53.372	Sphenodon_punctatus
MGP_SPRETEiJ_G0026765	-	67	39.526	ENSSPAG00000006774	rbm12b	95	39.526	Stegastes_partitus
MGP_SPRETEiJ_G0026765	-	100	68.649	ENSSSCG00000006110	RBM12B	100	65.060	Sus_scrofa
MGP_SPRETEiJ_G0026765	-	54	55.489	ENSTGUG00000011860	RBM12B	97	55.489	Taeniopygia_guttata
MGP_SPRETEiJ_G0026765	-	62	48.000	ENSTRUG00000013738	rbm12b	87	48.000	Takifugu_rubripes
MGP_SPRETEiJ_G0026765	-	87	70.925	ENSTBEG00000000449	RBM12B	84	71.219	Tupaia_belangeri
MGP_SPRETEiJ_G0026765	-	100	70.626	ENSUAMG00000023639	RBM12B	100	71.090	Ursus_americanus
MGP_SPRETEiJ_G0026765	-	100	70.501	ENSUMAG00000016008	RBM12B	100	70.501	Ursus_maritimus
MGP_SPRETEiJ_G0026765	-	87	86.986	ENSVPAG00000001080	RBM12B	90	86.986	Vicugna_pacos
MGP_SPRETEiJ_G0026765	-	100	68.467	ENSVVUG00000002694	RBM12B	100	70.302	Vulpes_vulpes
MGP_SPRETEiJ_G0026765	-	68	46.894	ENSXETG00000014694	rbm12b	100	46.516	Xenopus_tropicalis
MGP_SPRETEiJ_G0026765	-	64	41.892	ENSXETG00000014696	rbm12b	80	42.667	Xenopus_tropicalis
MGP_SPRETEiJ_G0026765	-	53	30.453	ENSXETG00000025920	-	97	30.453	Xenopus_tropicalis
MGP_SPRETEiJ_G0026765	-	50	39.264	ENSXCOG00000019735	-	100	40.184	Xiphophorus_couchianus
MGP_SPRETEiJ_G0026765	-	53	30.989	ENSXCOG00000019654	zgc:153215	98	30.989	Xiphophorus_couchianus
MGP_SPRETEiJ_G0026765	-	64	40.816	ENSXMAG00000014213	rbm12b	89	40.816	Xiphophorus_maculatus