EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026822 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 25052 bases
Position: chr4:30284435-30309486
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0064122	RRM_1	PF00076.22	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0064121	-	2929	-	MGP_SPRETEiJ_P0064121	265 (aa)	-	-
MGP_SPRETEiJ_T0064122	-	2896	-	MGP_SPRETEiJ_P0064122	261 (aa)	-	UPI00001F1B8A

Gene Model

Click here to download MGP_SPRETEiJ_G0026822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSG00000154548	SRSF12	100	89.655	Homo_sapiens
MGP_SPRETEiJ_G0026822	-	100	86.641	ENSAMEG00000000418	SRSF12	100	86.641	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026822	-	100	83.577	ENSANAG00000023238	SRSF12	100	83.577	Aotus_nancymaae
MGP_SPRETEiJ_G0026822	-	100	90.421	ENSBTAG00000046235	SRSF12	100	90.421	Bos_taurus
MGP_SPRETEiJ_G0026822	-	100	89.313	ENSCJAG00000038575	SRSF12	100	89.313	Callithrix_jacchus
MGP_SPRETEiJ_G0026822	-	92	90.000	ENSCAFG00000030745	SRSF12	75	90.000	Canis_familiaris
MGP_SPRETEiJ_G0026822	-	100	90.805	ENSCAFG00020015999	SRSF12	100	90.805	Canis_lupus_dingo
MGP_SPRETEiJ_G0026822	-	100	89.313	ENSCHIG00000014596	SRSF12	100	89.313	Capra_hircus
MGP_SPRETEiJ_G0026822	-	92	87.083	ENSTSYG00000001269	SRSF12	98	87.083	Carlito_syrichta
MGP_SPRETEiJ_G0026822	-	97	84.706	ENSCAPG00000001547	SRSF12	100	84.706	Cavia_aperea
MGP_SPRETEiJ_G0026822	-	92	88.703	ENSCPOG00000010917	SRSF12	100	88.703	Cavia_porcellus
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSCCAG00000033029	SRSF12	100	89.655	Cebus_capucinus
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSCATG00000030620	SRSF12	100	89.655	Cercocebus_atys
MGP_SPRETEiJ_G0026822	-	92	89.540	ENSCLAG00000013868	SRSF12	100	89.540	Chinchilla_lanigera
MGP_SPRETEiJ_G0026822	-	100	88.931	ENSCSAG00000017325	SRSF12	100	88.931	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026822	-	77	88.177	ENSCHOG00000013911	SRSF12	100	88.177	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026822	-	92	88.382	ENSCANG00000038708	SRSF12	100	88.382	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026822	-	92	94.979	ENSCGRG00000017064	Srsf12	100	94.979	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026822	-	92	66.109	ENSETEG00000001386	SRSF12	100	66.109	Echinops_telfairi
MGP_SPRETEiJ_G0026822	-	58	51.613	ENSEBUG00000007679	SRSF12	50	75.000	Eptatretus_burgeri
MGP_SPRETEiJ_G0026822	-	100	89.695	ENSEASG00005005686	SRSF12	100	89.695	Equus_asinus_asinus
MGP_SPRETEiJ_G0026822	-	100	90.421	ENSECAG00000019135	SRSF12	100	90.421	Equus_caballus
MGP_SPRETEiJ_G0026822	-	100	89.313	ENSEEUG00000011026	SRSF12	100	89.313	Erinaceus_europaeus
MGP_SPRETEiJ_G0026822	-	100	91.188	ENSFCAG00000029256	SRSF12	100	91.188	Felis_catus
MGP_SPRETEiJ_G0026822	-	92	88.703	ENSFDAG00000003699	SRSF12	100	88.703	Fukomys_damarensis
MGP_SPRETEiJ_G0026822	-	92	89.121	ENSGGOG00000024850	SRSF12	97	89.121	Gorilla_gorilla
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSHGLG00000001138	SRSF12	100	89.655	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026822	-	92	88.703	ENSHGLG00100005391	SRSF12	82	88.703	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026822	-	100	89.313	ENSSTOG00000007170	SRSF12	100	89.313	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026822	-	80	64.167	ENSLACG00000004376	SRSF12	97	67.399	Latimeria_chalumnae
MGP_SPRETEiJ_G0026822	-	92	87.967	ENSLAFG00000005458	SRSF12	100	87.967	Loxodonta_africana
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSMFAG00000036543	SRSF12	100	89.655	Macaca_fascicularis
MGP_SPRETEiJ_G0026822	-	100	88.931	ENSMMUG00000014941	SRSF12	100	88.931	Macaca_mulatta
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSMNEG00000030957	SRSF12	100	89.655	Macaca_nemestrina
MGP_SPRETEiJ_G0026822	-	92	88.797	ENSMLEG00000042204	SRSF12	100	88.797	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026822	-	97	94.466	ENSMAUG00000017845	Srsf12	100	94.466	Mesocricetus_auratus
MGP_SPRETEiJ_G0026822	-	100	90.038	ENSMICG00000034783	SRSF12	100	90.038	Microcebus_murinus
MGP_SPRETEiJ_G0026822	-	100	95.402	ENSMOCG00000006973	Srsf12	100	95.402	Microtus_ochrogaster
MGP_SPRETEiJ_G0026822	-	98	77.519	ENSMODG00000018282	SRSF12	100	76.357	Monodelphis_domestica
MGP_SPRETEiJ_G0026822	-	100	98.467	MGP_CAROLIEiJ_G0025873	-	100	98.467	Mus_caroli
MGP_SPRETEiJ_G0026822	-	100	100.000	ENSMUSG00000054679	Srsf12	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0026822	-	100	98.084	MGP_PahariEiJ_G0023996	-	100	98.084	Mus_pahari
MGP_SPRETEiJ_G0026822	-	92	86.640	ENSMLUG00000001545	SRSF12	100	86.640	Myotis_lucifugus
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSNGAG00000019092	Srsf12	100	89.655	Nannospalax_galili
MGP_SPRETEiJ_G0026822	-	92	88.382	ENSNLEG00000032347	SRSF12	100	88.382	Nomascus_leucogenys
MGP_SPRETEiJ_G0026822	-	92	85.000	ENSOPRG00000016052	SRSF12	100	85.000	Ochotona_princeps
MGP_SPRETEiJ_G0026822	-	100	83.969	ENSODEG00000009174	-	100	83.969	Octodon_degus
MGP_SPRETEiJ_G0026822	-	95	89.157	ENSOCUG00000000945	SRSF12	100	89.157	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026822	-	92	87.917	ENSOGAG00000006421	SRSF12	100	87.917	Otolemur_garnettii
MGP_SPRETEiJ_G0026822	-	100	83.206	ENSPPAG00000041573	SRSF12	99	83.846	Pan_paniscus
MGP_SPRETEiJ_G0026822	-	100	91.188	ENSPPRG00000018838	SRSF12	100	91.188	Panthera_pardus
MGP_SPRETEiJ_G0026822	-	100	89.655	ENSPTRG00000018415	SRSF12	100	89.655	Pan_troglodytes
MGP_SPRETEiJ_G0026822	-	100	88.931	ENSPANG00000016731	SRSF12	100	88.931	Papio_anubis
MGP_SPRETEiJ_G0026822	-	100	94.636	ENSPEMG00000006893	Srsf12	100	94.636	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026822	-	100	77.011	ENSPCIG00000021713	SRSF12	100	77.395	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026822	-	100	86.260	ENSPPYG00000016837	SRSF12	100	86.260	Pongo_abelii
MGP_SPRETEiJ_G0026822	-	100	72.519	ENSPCAG00000010020	SRSF12	100	72.519	Procavia_capensis
MGP_SPRETEiJ_G0026822	-	100	89.695	ENSPCOG00000001227	SRSF12	100	89.695	Propithecus_coquereli
MGP_SPRETEiJ_G0026822	-	92	87.917	ENSPVAG00000001046	SRSF12	100	87.917	Pteropus_vampyrus
MGP_SPRETEiJ_G0026822	-	100	89.272	ENSRNOG00000051383	Srsf12	100	89.272	Rattus_norvegicus
MGP_SPRETEiJ_G0026822	-	92	89.121	ENSRBIG00000029756	SRSF12	97	89.121	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026822	-	99	89.575	ENSRROG00000035967	SRSF12	100	89.575	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026822	-	92	82.609	ENSSBOG00000032399	SRSF12	100	82.609	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026822	-	92	88.797	ENSSARG00000007795	SRSF12	100	88.797	Sorex_araneus
MGP_SPRETEiJ_G0026822	-	92	75.732	ENSSPUG00000001194	SRSF12	97	73.384	Sphenodon_punctatus
MGP_SPRETEiJ_G0026822	-	100	90.421	ENSSSCG00000032781	SRSF12	100	90.421	Sus_scrofa
MGP_SPRETEiJ_G0026822	-	92	85.774	ENSTBEG00000008665	-	100	85.774	Tupaia_belangeri
MGP_SPRETEiJ_G0026822	-	59	87.742	ENSTBEG00000015120	-	100	84.516	Tupaia_belangeri
MGP_SPRETEiJ_G0026822	-	100	84.351	ENSTTRG00000003682	SRSF12	100	84.351	Tursiops_truncatus
MGP_SPRETEiJ_G0026822	-	98	83.721	ENSUMAG00000010534	SRSF12	98	83.721	Ursus_maritimus
MGP_SPRETEiJ_G0026822	-	100	83.588	ENSVPAG00000004175	SRSF12	100	83.588	Vicugna_pacos
MGP_SPRETEiJ_G0026822	-	95	87.500	ENSVVUG00000010197	SRSF12	99	87.500	Vulpes_vulpes
MGP_SPRETEiJ_G0026822	-	99	70.189	ENSXETG00000005385	srsf12	97	69.057	Xenopus_tropicalis