EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0026945 (Gene tree)
Gene ID: -
Gene Symbol: Ncbp1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 38533 bases
Position: chr4:43559907-43598439
Accession: 1891840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0064714	MIF4G_like	PF09088.11	7.8e-35	1	1
MGP_SPRETEiJ_P0064714	MIF4G_like_2	PF09090.11	6e-84	1	1
MGP_SPRETEiJ_P0064714	MIF4G	PF02854.19	9.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0064717	-	781	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0064716	-	469	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0064714	-	3011	-	MGP_SPRETEiJ_P0064714	790 (aa)	-	UPI00001F0CA4

Gene Model

Click here to download MGP_SPRETEiJ_G0026945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0026945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSG00000136937	NCBP1	100	97.975	Homo_sapiens
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.375	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.980	ENSAMEG00000004763	NCBP1	100	97.980	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.733	ENSACIG00000000274	NCBP1	99	83.102	Amphilophus_citrinellus
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.501	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.501	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.746	ENSATEG00000006929	NCBP1	99	82.368	Anabas_testudineus
MGP_SPRETEiJ_G0026945	Ncbp1	95	89.960	ENSAPLG00000016318	NCBP1	100	90.092	Anas_platyrhynchos
MGP_SPRETEiJ_G0026945	Ncbp1	100	86.142	ENSACAG00000004409	NCBP1	87	86.017	Anolis_carolinensis
MGP_SPRETEiJ_G0026945	Ncbp1	100	95.063	ENSANAG00000025744	NCBP1	99	98.042	Aotus_nancymaae
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.997	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.658	ENSAMXG00000016364	NCBP1	99	81.156	Astyanax_mexicanus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSBTAG00000009732	NCBP1	100	97.722	Bos_taurus
MGP_SPRETEiJ_G0026945	Ncbp1	99	34.525	WBGene00018156	ncbp-1	99	34.402	Caenorhabditis_elegans
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.228	ENSCJAG00000010840	NCBP1	100	98.678	Callithrix_jacchus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSCAFG00000002445	NCBP1	100	98.101	Canis_familiaris
MGP_SPRETEiJ_G0026945	Ncbp1	99	97.338	ENSCAFG00020017997	NCBP1	100	97.950	Canis_lupus_dingo
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSCHIG00000020139	NCBP1	100	97.722	Capra_hircus
MGP_SPRETEiJ_G0026945	Ncbp1	52	96.845	ENSTSYG00000011914	NCBP1	98	99.060	Carlito_syrichta
MGP_SPRETEiJ_G0026945	Ncbp1	81	87.812	ENSCAPG00000014252	NCBP1	90	87.656	Cavia_aperea
MGP_SPRETEiJ_G0026945	Ncbp1	97	96.089	ENSCPOG00000012573	NCBP1	99	96.089	Cavia_porcellus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSCCAG00000032297	NCBP1	100	98.101	Cebus_capucinus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSCATG00000010052	NCBP1	100	97.975	Cercocebus_atys
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSCLAG00000014339	NCBP1	100	97.975	Chinchilla_lanigera
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSCSAG00000010929	NCBP1	100	97.975	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0026945	Ncbp1	91	94.915	ENSCHOG00000010332	NCBP1	91	94.915	Choloepus_hoffmanni
MGP_SPRETEiJ_G0026945	Ncbp1	100	85.535	ENSCPBG00000024344	NCBP1	99	90.000	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0026945	Ncbp1	99	53.807	ENSCING00000008990	-	98	53.553	Ciona_intestinalis
MGP_SPRETEiJ_G0026945	Ncbp1	99	52.304	ENSCSAVG00000005300	-	99	54.450	Ciona_savignyi
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSCANG00000036913	NCBP1	100	97.975	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.861	ENSCGRG00001015771	Ncbp1	100	98.861	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0026945	Ncbp1	99	98.846	ENSCGRG00000010311	Ncbp1	100	98.846	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.494	ENSCSEG00000012377	NCBP1	99	82.937	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0026945	Ncbp1	99	80.881	ENSCVAG00000008795	NCBP1	99	81.509	Cyprinodon_variegatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.089	ENSDNOG00000006885	NCBP1	100	97.089	Dasypus_novemcinctus
MGP_SPRETEiJ_G0026945	Ncbp1	100	93.577	ENSDORG00000013652	Ncbp1	100	93.577	Dipodomys_ordii
MGP_SPRETEiJ_G0026945	Ncbp1	83	32.990	FBgn0038887	CG7907	87	32.990	Drosophila_melanogaster
MGP_SPRETEiJ_G0026945	Ncbp1	100	57.019	FBgn0022942	Cbp80	100	57.500	Drosophila_melanogaster
MGP_SPRETEiJ_G0026945	Ncbp1	89	93.450	ENSETEG00000009705	NCBP1	89	93.450	Echinops_telfairi
MGP_SPRETEiJ_G0026945	Ncbp1	100	73.836	ENSEBUG00000008386	NCBP1	100	73.585	Eptatretus_burgeri
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.595	ENSEASG00005022795	NCBP1	100	97.595	Equus_asinus_asinus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSECAG00000013847	NCBP1	100	97.722	Equus_caballus
MGP_SPRETEiJ_G0026945	Ncbp1	95	93.360	ENSEEUG00000015973	NCBP1	99	92.961	Erinaceus_europaeus
MGP_SPRETEiJ_G0026945	Ncbp1	99	80.252	ENSELUG00000022519	NCBP1	99	81.006	Esox_lucius
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSFCAG00000001206	NCBP1	100	97.975	Felis_catus
MGP_SPRETEiJ_G0026945	Ncbp1	98	88.804	ENSFALG00000001193	NCBP1	100	88.931	Ficedula_albicollis
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSFDAG00000010864	NCBP1	100	97.722	Fukomys_damarensis
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.264	ENSFHEG00000000655	NCBP1	99	81.761	Fundulus_heteroclitus
MGP_SPRETEiJ_G0026945	Ncbp1	99	79.245	ENSGMOG00000008653	NCBP1	99	79.245	Gadus_morhua
MGP_SPRETEiJ_G0026945	Ncbp1	98	89.987	ENSGALG00000002087	NCBP1	100	89.533	Gallus_gallus
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.890	ENSGAFG00000017787	NCBP1	99	82.763	Gambusia_affinis
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.681	ENSGACG00000016772	NCBP1	98	81.305	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	88.176	ENSGAGG00000019483	NCBP1	99	89.722	Gopherus_agassizii
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSGGOG00000001376	NCBP1	100	97.975	Gorilla_gorilla
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.997	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
MGP_SPRETEiJ_G0026945	Ncbp1	100	85.480	ENSHGLG00000018112	-	100	85.480	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.848	ENSHGLG00000001882	NCBP1	100	97.848	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.848	ENSHGLG00100013014	NCBP1	100	97.848	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026945	Ncbp1	100	85.227	ENSHGLG00100017373	-	100	85.227	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0026945	Ncbp1	79	72.108	ENSHCOG00000000204	NCBP1	92	72.108	Hippocampus_comes
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.887	ENSIPUG00000007275	ncbp1	99	81.509	Ictalurus_punctatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSSTOG00000002695	NCBP1	100	98.101	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.368	ENSKMAG00000003594	NCBP1	99	85.976	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0026945	Ncbp1	99	80.870	ENSLBEG00000011661	NCBP1	99	80.373	Labrus_bergylta
MGP_SPRETEiJ_G0026945	Ncbp1	100	79.478	ENSLACG00000013955	NCBP1	100	78.980	Latimeria_chalumnae
MGP_SPRETEiJ_G0026945	Ncbp1	99	71.945	ENSLOCG00000009579	NCBP1	99	71.945	Lepisosteus_oculatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.595	ENSLAFG00000005999	NCBP1	100	97.595	Loxodonta_africana
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSMFAG00000030994	NCBP1	100	97.975	Macaca_fascicularis
MGP_SPRETEiJ_G0026945	Ncbp1	99	98.074	ENSMMUG00000012281	NCBP1	99	98.074	Macaca_mulatta
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSMNEG00000042790	NCBP1	100	97.975	Macaca_nemestrina
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSMLEG00000030374	NCBP1	100	97.975	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.123	ENSMAMG00000014806	NCBP1	99	82.620	Mastacembelus_armatus
MGP_SPRETEiJ_G0026945	Ncbp1	97	82.682	ENSMZEG00005009290	-	99	82.552	Maylandia_zebra
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.997	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
MGP_SPRETEiJ_G0026945	Ncbp1	99	98.092	ENSMAUG00000020583	Ncbp1	99	98.092	Mesocricetus_auratus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.595	ENSMICG00000012682	NCBP1	100	97.595	Microcebus_murinus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.481	ENSMOCG00000015818	Ncbp1	100	98.481	Microtus_ochrogaster
MGP_SPRETEiJ_G0026945	Ncbp1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
MGP_SPRETEiJ_G0026945	Ncbp1	100	93.165	ENSMODG00000003202	NCBP1	99	92.911	Monodelphis_domestica
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.368	ENSMALG00000003547	NCBP1	99	81.864	Monopterus_albus
MGP_SPRETEiJ_G0026945	Ncbp1	100	100.000	MGP_CAROLIEiJ_G0025982	Ncbp1	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0026945	Ncbp1	100	100.000	ENSMUSG00000028330	Ncbp1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0026945	Ncbp1	100	99.620	MGP_PahariEiJ_G0028318	Ncbp1	100	99.620	Mus_pahari
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSMPUG00000006399	NCBP1	100	98.101	Mustela_putorius_furo
MGP_SPRETEiJ_G0026945	Ncbp1	99	96.919	ENSMLUG00000015201	NCBP1	100	96.919	Myotis_lucifugus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.734	ENSNGAG00000014101	Ncbp1	100	98.734	Nannospalax_galili
MGP_SPRETEiJ_G0026945	Ncbp1	73	86.784	ENSNBRG00000014674	NCBP1	94	86.784	Neolamprologus_brichardi
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSNLEG00000016909	NCBP1	100	97.975	Nomascus_leucogenys
MGP_SPRETEiJ_G0026945	Ncbp1	89	94.144	ENSMEUG00000010672	NCBP1	90	91.892	Notamacropus_eugenii
MGP_SPRETEiJ_G0026945	Ncbp1	84	91.186	ENSOPRG00000002144	-	88	91.186	Ochotona_princeps
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSODEG00000003232	NCBP1	100	97.722	Octodon_degus
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.997	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
MGP_SPRETEiJ_G0026945	Ncbp1	79	94.864	ENSOANG00000001918	NCBP1	100	94.864	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0026945	Ncbp1	98	97.301	ENSOCUG00000013853	NCBP1	97	97.301	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.203	ENSORLG00000011008	NCBP1	99	80.827	Oryzias_latipes
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.203	ENSORLG00020017455	NCBP1	99	80.827	Oryzias_latipes_hni
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.328	ENSORLG00015012127	NCBP1	99	80.952	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.704	ENSOMEG00000020698	NCBP1	99	81.579	Oryzias_melastigma
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.980	ENSOGAG00000013888	NCBP1	100	97.980	Otolemur_garnettii
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	ENSOARG00000011233	NCBP1	100	97.722	Ovis_aries
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSPPAG00000026462	NCBP1	100	97.975	Pan_paniscus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSPPRG00000022574	NCBP1	100	98.101	Panthera_pardus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSPTIG00000018507	NCBP1	100	98.101	Panthera_tigris_altaica
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSPTRG00000021167	NCBP1	100	97.975	Pan_troglodytes
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSPANG00000025591	NCBP1	100	97.975	Papio_anubis
MGP_SPRETEiJ_G0026945	Ncbp1	100	80.755	ENSPKIG00000015861	NCBP1	100	80.629	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0026945	Ncbp1	64	87.891	ENSPSIG00000009558	NCBP1	100	88.086	Pelodiscus_sinensis
MGP_SPRETEiJ_G0026945	Ncbp1	99	79.345	ENSPMGG00000020476	NCBP1	99	78.841	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.354	ENSPEMG00000020105	Ncbp1	100	98.354	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0026945	Ncbp1	100	67.537	ENSPMAG00000005533	NCBP1	100	67.669	Petromyzon_marinus
MGP_SPRETEiJ_G0026945	Ncbp1	100	92.911	ENSPCIG00000015800	NCBP1	99	93.293	Phascolarctos_cinereus
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.080	ENSPFOG00000004158	NCBP1	99	81.704	Poecilia_formosa
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.516	ENSPLAG00000020002	NCBP1	99	82.138	Poecilia_latipinna
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.516	ENSPMEG00000019821	NCBP1	99	82.138	Poecilia_mexicana
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.538	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSPPYG00000019426	NCBP1	100	97.975	Pongo_abelii
MGP_SPRETEiJ_G0026945	Ncbp1	90	89.124	ENSPCAG00000009943	NCBP1	90	89.124	Procavia_capensis
MGP_SPRETEiJ_G0026945	Ncbp1	82	98.026	ENSPCOG00000020024	NCBP1	98	98.026	Propithecus_coquereli
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.468	ENSPVAG00000005924	NCBP1	100	97.468	Pteropus_vampyrus
MGP_SPRETEiJ_G0026945	Ncbp1	91	83.101	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.658	ENSPNAG00000027753	NCBP1	99	81.030	Pygocentrus_nattereri
MGP_SPRETEiJ_G0026945	Ncbp1	100	99.494	ENSRNOG00000023605	Ncbp1	100	99.494	Rattus_norvegicus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSRBIG00000043175	NCBP1	100	97.975	Rhinopithecus_bieti
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSRROG00000029767	NCBP1	100	97.975	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSSBOG00000019378	NCBP1	100	98.101	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0026945	Ncbp1	69	93.798	ENSSHAG00000015882	NCBP1	73	93.385	Sarcophilus_harrisii
MGP_SPRETEiJ_G0026945	Ncbp1	99	80.485	ENSSFOG00015001872	NCBP1	100	80.127	Scleropages_formosus
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.234	ENSSMAG00000007463	NCBP1	99	80.982	Scophthalmus_maximus
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.016	ENSSDUG00000007019	NCBP1	100	82.305	Seriola_dumerili
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.746	ENSSLDG00000021924	NCBP1	99	82.368	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0026945	Ncbp1	85	89.083	ENSSARG00000007274	NCBP1	87	89.083	Sorex_araneus
MGP_SPRETEiJ_G0026945	Ncbp1	100	81.392	ENSSPUG00000008609	NCBP1	100	81.392	Sphenodon_punctatus
MGP_SPRETEiJ_G0026945	Ncbp1	99	83.249	ENSSPAG00000012550	NCBP1	99	82.872	Stegastes_partitus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.848	ENSSSCG00000005366	NCBP1	100	97.848	Sus_scrofa
MGP_SPRETEiJ_G0026945	Ncbp1	100	83.145	ENSTGUG00000001472	NCBP1	100	83.270	Taeniopygia_guttata
MGP_SPRETEiJ_G0026945	Ncbp1	99	81.486	ENSTRUG00000005287	NCBP1	99	81.108	Takifugu_rubripes
MGP_SPRETEiJ_G0026945	Ncbp1	100	94.684	ENSTBEG00000004035	NCBP1	100	94.684	Tupaia_belangeri
MGP_SPRETEiJ_G0026945	Ncbp1	88	98.030	ENSTTRG00000000507	NCBP1	88	98.030	Tursiops_truncatus
MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	ENSUAMG00000005471	NCBP1	100	97.975	Ursus_americanus
MGP_SPRETEiJ_G0026945	Ncbp1	97	95.709	ENSUMAG00000011865	NCBP1	100	97.950	Ursus_maritimus
MGP_SPRETEiJ_G0026945	Ncbp1	100	93.671	ENSVPAG00000010537	NCBP1	100	93.671	Vicugna_pacos
MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	ENSVVUG00000019725	NCBP1	100	98.101	Vulpes_vulpes
MGP_SPRETEiJ_G0026945	Ncbp1	100	80.405	ENSXETG00000010179	ncbp1	100	80.405	Xenopus_tropicalis
MGP_SPRETEiJ_G0026945	Ncbp1	99	82.642	ENSXMAG00000018253	NCBP1	99	82.264	Xiphophorus_maculatus