EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027075 (Gene tree)
Gene ID: -
Gene Symbol: Rasef
Alias: RAB45
Full Name: RAS and EF hand domain containing
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 77559 bases
Position: chr4:69889835-69967393
Accession: 2448565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0065190	MMR_HSR1	PF01926.23	6.1e-08	1	1
MGP_SPRETEiJ_P0065189	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0065189	-	5194	-	MGP_SPRETEiJ_P0065189	627 (aa)	-	-
MGP_SPRETEiJ_T0065190	-	5169	-	MGP_SPRETEiJ_P0065190	555 (aa)	-	-
MGP_SPRETEiJ_T0065191	-	959	-	MGP_SPRETEiJ_P0065191	281 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027075	Rasef	100	83.124	ENSG00000165105	RASEF	82	82.343	Homo_sapiens
MGP_SPRETEiJ_G0027075	Rasef	99	53.136	ENSAPOG00000024369	rasef	97	53.291	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027075	Rasef	99	84.173	ENSAMEG00000009467	RASEF	83	83.636	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027075	Rasef	94	52.444	ENSACIG00000005549	rasef	83	52.496	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027075	Rasef	94	51.220	ENSAOCG00000011464	rasef	80	52.659	Amphiprion_ocellaris
MGP_SPRETEiJ_G0027075	Rasef	99	52.821	ENSAPEG00000003461	rasef	87	52.913	Amphiprion_percula
MGP_SPRETEiJ_G0027075	Rasef	94	53.761	ENSATEG00000015032	rasef	86	54.040	Anabas_testudineus
MGP_SPRETEiJ_G0027075	Rasef	99	72.679	ENSAPLG00000013969	RASEF	95	72.546	Anas_platyrhynchos
MGP_SPRETEiJ_G0027075	Rasef	99	72.222	ENSACAG00000002155	RASEF	83	72.575	Anolis_carolinensis
MGP_SPRETEiJ_G0027075	Rasef	100	84.201	ENSANAG00000035226	RASEF	82	83.333	Aotus_nancymaae
MGP_SPRETEiJ_G0027075	Rasef	99	54.561	ENSACLG00000017818	rasef	86	54.750	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027075	Rasef	99	55.026	ENSAMXG00000011411	rasef	85	54.720	Astyanax_mexicanus
MGP_SPRETEiJ_G0027075	Rasef	100	84.022	ENSBTAG00000021751	RASEF	82	83.498	Bos_taurus
MGP_SPRETEiJ_G0027075	Rasef	100	83.333	ENSCJAG00000003547	RASEF	82	82.537	Callithrix_jacchus
MGP_SPRETEiJ_G0027075	Rasef	99	83.633	ENSCAFG00000001453	RASEF	74	83.140	Canis_familiaris
MGP_SPRETEiJ_G0027075	Rasef	99	83.813	ENSCAFG00020023859	RASEF	82	83.306	Canis_lupus_dingo
MGP_SPRETEiJ_G0027075	Rasef	100	84.560	ENSCHIG00000020336	RASEF	98	83.089	Capra_hircus
MGP_SPRETEiJ_G0027075	Rasef	93	83.462	ENSTSYG00000006987	RASEF	99	83.462	Carlito_syrichta
MGP_SPRETEiJ_G0027075	Rasef	80	68.243	ENSCAPG00000010585	-	100	65.455	Cavia_aperea
MGP_SPRETEiJ_G0027075	Rasef	100	76.259	ENSCPOG00000005004	RASEF	100	77.143	Cavia_porcellus
MGP_SPRETEiJ_G0027075	Rasef	100	84.022	ENSCCAG00000031624	RASEF	82	82.838	Cebus_capucinus
MGP_SPRETEiJ_G0027075	Rasef	99	46.359	ENSCLAG00000004622	-	99	46.359	Chinchilla_lanigera
MGP_SPRETEiJ_G0027075	Rasef	100	83.124	ENSCSAG00000007663	RASEF	83	81.240	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027075	Rasef	94	80.268	ENSCHOG00000001831	RASEF	95	78.809	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027075	Rasef	99	71.864	ENSCPBG00000019037	RASEF	98	70.942	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027075	Rasef	100	82.406	ENSCANG00000034081	RASEF	82	81.518	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027075	Rasef	100	92.086	ENSCGRG00001001324	Rasef	100	92.047	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027075	Rasef	100	92.086	ENSCGRG00000006455	Rasef	100	92.086	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027075	Rasef	89	49.419	ENSCSEG00000017898	rasef	81	48.041	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027075	Rasef	99	54.844	ENSCVAG00000006168	rasef	75	55.024	Cyprinodon_variegatus
MGP_SPRETEiJ_G0027075	Rasef	100	53.726	ENSDARG00000076250	rasef	87	52.773	Danio_rerio
MGP_SPRETEiJ_G0027075	Rasef	100	83.303	ENSDNOG00000006002	RASEF	74	82.838	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027075	Rasef	98	84.307	ENSDORG00000015570	Rasef	100	84.278	Dipodomys_ordii
MGP_SPRETEiJ_G0027075	Rasef	99	40.068	ENSEBUG00000012179	rasef	99	39.152	Eptatretus_burgeri
MGP_SPRETEiJ_G0027075	Rasef	99	49.734	ENSEBUG00000012629	rasef	82	49.091	Eptatretus_burgeri
MGP_SPRETEiJ_G0027075	Rasef	99	82.374	ENSEASG00005015967	RASEF	98	82.521	Equus_asinus_asinus
MGP_SPRETEiJ_G0027075	Rasef	99	82.734	ENSECAG00000000324	RASEF	98	82.718	Equus_caballus
MGP_SPRETEiJ_G0027075	Rasef	94	67.433	ENSEEUG00000008455	RASEF	100	68.806	Erinaceus_europaeus
MGP_SPRETEiJ_G0027075	Rasef	99	83.094	ENSFCAG00000002416	RASEF	83	81.536	Felis_catus
MGP_SPRETEiJ_G0027075	Rasef	99	73.297	ENSFALG00000003611	RASEF	99	73.122	Ficedula_albicollis
MGP_SPRETEiJ_G0027075	Rasef	100	80.969	ENSFDAG00000013428	RASEF	100	81.376	Fukomys_damarensis
MGP_SPRETEiJ_G0027075	Rasef	94	53.396	ENSFHEG00000022470	rasef	78	53.368	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027075	Rasef	94	51.149	ENSGMOG00000010090	rasef	83	53.887	Gadus_morhua
MGP_SPRETEiJ_G0027075	Rasef	99	72.451	ENSGALG00000012576	RASEF	84	72.204	Gallus_gallus
MGP_SPRETEiJ_G0027075	Rasef	99	53.509	ENSGAFG00000013735	rasef	85	53.473	Gambusia_affinis
MGP_SPRETEiJ_G0027075	Rasef	99	55.379	ENSGACG00000007528	rasef	86	55.032	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027075	Rasef	99	72.352	ENSGAGG00000007338	RASEF	99	71.429	Gopherus_agassizii
MGP_SPRETEiJ_G0027075	Rasef	100	82.944	ENSGGOG00000006651	RASEF	82	82.178	Gorilla_gorilla
MGP_SPRETEiJ_G0027075	Rasef	99	54.389	ENSHBUG00000010345	rasef	74	54.589	Haplochromis_burtoni
MGP_SPRETEiJ_G0027075	Rasef	100	81.867	ENSHGLG00000000399	RASEF	84	80.000	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027075	Rasef	100	81.867	ENSHGLG00100008043	RASEF	100	82.047	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027075	Rasef	99	49.016	ENSHCOG00000010976	rasef	84	48.849	Hippocampus_comes
MGP_SPRETEiJ_G0027075	Rasef	99	53.114	ENSIPUG00000008768	rasef	82	53.909	Ictalurus_punctatus
MGP_SPRETEiJ_G0027075	Rasef	100	83.662	ENSSTOG00000004311	RASEF	82	82.838	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027075	Rasef	100	82.290	ENSJJAG00000023215	Rasef	100	82.441	Jaculus_jaculus
MGP_SPRETEiJ_G0027075	Rasef	99	52.261	ENSKMAG00000021106	rasef	78	51.282	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027075	Rasef	99	49.554	ENSLBEG00000021098	-	85	50.492	Labrus_bergylta
MGP_SPRETEiJ_G0027075	Rasef	99	67.260	ENSLACG00000010849	RASEF	86	67.047	Latimeria_chalumnae
MGP_SPRETEiJ_G0027075	Rasef	99	64.928	ENSLOCG00000002094	rasef	89	62.618	Lepisosteus_oculatus
MGP_SPRETEiJ_G0027075	Rasef	100	82.734	ENSLAFG00000010552	RASEF	100	82.550	Loxodonta_africana
MGP_SPRETEiJ_G0027075	Rasef	100	82.765	ENSMFAG00000046414	RASEF	82	81.848	Macaca_fascicularis
MGP_SPRETEiJ_G0027075	Rasef	100	82.944	ENSMNEG00000044341	RASEF	82	82.013	Macaca_nemestrina
MGP_SPRETEiJ_G0027075	Rasef	100	82.585	ENSMLEG00000034579	RASEF	82	81.683	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027075	Rasef	82	53.750	ENSMAMG00000001536	rasef	82	53.788	Mastacembelus_armatus
MGP_SPRETEiJ_G0027075	Rasef	94	51.128	ENSMZEG00005004819	rasef	82	51.573	Maylandia_zebra
MGP_SPRETEiJ_G0027075	Rasef	100	93.165	ENSMAUG00000010820	Rasef	100	93.109	Mesocricetus_auratus
MGP_SPRETEiJ_G0027075	Rasef	100	82.796	ENSMICG00000011836	RASEF	82	82.372	Microcebus_murinus
MGP_SPRETEiJ_G0027075	Rasef	100	92.626	ENSMOCG00000000943	Rasef	100	92.626	Microtus_ochrogaster
MGP_SPRETEiJ_G0027075	Rasef	97	51.526	ENSMMOG00000000102	rasef	84	51.155	Mola_mola
MGP_SPRETEiJ_G0027075	Rasef	100	77.240	ENSMODG00000009037	RASEF	82	76.771	Monodelphis_domestica
MGP_SPRETEiJ_G0027075	Rasef	99	53.765	ENSMALG00000009830	rasef	87	53.710	Monopterus_albus
MGP_SPRETEiJ_G0027075	Rasef	100	98.919	MGP_CAROLIEiJ_G0026109	Rasef	100	98.919	Mus_caroli
MGP_SPRETEiJ_G0027075	Rasef	100	98.739	ENSMUSG00000043003	Rasef	100	98.739	Mus_musculus
MGP_SPRETEiJ_G0027075	Rasef	100	96.757	MGP_PahariEiJ_G0028447	Rasef	100	96.757	Mus_pahari
MGP_SPRETEiJ_G0027075	Rasef	99	81.047	ENSMPUG00000013070	RASEF	99	81.047	Mustela_putorius_furo
MGP_SPRETEiJ_G0027075	Rasef	100	80.935	ENSMLUG00000013108	RASEF	82	80.331	Myotis_lucifugus
MGP_SPRETEiJ_G0027075	Rasef	100	84.919	ENSNGAG00000014878	Rasef	100	84.919	Nannospalax_galili
MGP_SPRETEiJ_G0027075	Rasef	94	51.024	ENSNBRG00000012335	rasef	83	51.473	Neolamprologus_brichardi
MGP_SPRETEiJ_G0027075	Rasef	100	82.944	ENSNLEG00000003245	RASEF	83	81.240	Nomascus_leucogenys
MGP_SPRETEiJ_G0027075	Rasef	100	74.373	ENSMEUG00000016412	RASEF	82	73.476	Notamacropus_eugenii
MGP_SPRETEiJ_G0027075	Rasef	100	67.145	ENSOPRG00000002742	-	81	68.289	Ochotona_princeps
MGP_SPRETEiJ_G0027075	Rasef	50	61.786	ENSODEG00000002594	-	99	61.786	Octodon_degus
MGP_SPRETEiJ_G0027075	Rasef	99	54.152	ENSONIG00000015021	rasef	81	56.649	Oreochromis_niloticus
MGP_SPRETEiJ_G0027075	Rasef	100	71.804	ENSOANG00000010379	RASEF	81	72.504	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027075	Rasef	100	81.867	ENSOCUG00000001548	RASEF	82	80.858	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027075	Rasef	99	53.899	ENSORLG00000005076	rasef	75	54.153	Oryzias_latipes
MGP_SPRETEiJ_G0027075	Rasef	99	53.726	ENSORLG00020020049	rasef	75	53.994	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027075	Rasef	99	52.931	ENSORLG00015008479	rasef	75	53.674	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027075	Rasef	99	52.504	ENSOMEG00000023457	rasef	85	54.975	Oryzias_melastigma
MGP_SPRETEiJ_G0027075	Rasef	99	83.453	ENSOGAG00000012724	RASEF	99	83.557	Otolemur_garnettii
MGP_SPRETEiJ_G0027075	Rasef	100	84.022	ENSOARG00000009073	RASEF	78	82.545	Ovis_aries
MGP_SPRETEiJ_G0027075	Rasef	100	83.303	ENSPPAG00000042152	RASEF	85	82.343	Pan_paniscus
MGP_SPRETEiJ_G0027075	Rasef	99	83.273	ENSPPRG00000008487	RASEF	83	81.699	Panthera_pardus
MGP_SPRETEiJ_G0027075	Rasef	99	83.273	ENSPTIG00000006676	RASEF	98	81.025	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027075	Rasef	100	83.124	ENSPTRG00000021052	RASEF	85	82.178	Pan_troglodytes
MGP_SPRETEiJ_G0027075	Rasef	100	82.944	ENSPANG00000024899	RASEF	82	82.013	Papio_anubis
MGP_SPRETEiJ_G0027075	Rasef	99	70.430	ENSPSIG00000017699	RASEF	99	69.329	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027075	Rasef	99	44.643	ENSPMGG00000015499	rasef	90	83.019	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027075	Rasef	100	93.165	ENSPEMG00000002797	Rasef	100	93.165	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027075	Rasef	94	48.545	ENSPMAG00000001634	rasef	81	47.993	Petromyzon_marinus
MGP_SPRETEiJ_G0027075	Rasef	100	77.957	ENSPCIG00000027655	RASEF	82	76.936	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027075	Rasef	99	53.136	ENSPFOG00000018924	rasef	82	53.420	Poecilia_formosa
MGP_SPRETEiJ_G0027075	Rasef	99	51.773	ENSPLAG00000022907	RASEF	97	52.333	Poecilia_latipinna
MGP_SPRETEiJ_G0027075	Rasef	99	53.684	ENSPMEG00000006546	rasef	87	53.485	Poecilia_mexicana
MGP_SPRETEiJ_G0027075	Rasef	99	53.509	ENSPREG00000018728	rasef	75	52.707	Poecilia_reticulata
MGP_SPRETEiJ_G0027075	Rasef	100	83.124	ENSPPYG00000019320	RASEF	83	81.403	Pongo_abelii
MGP_SPRETEiJ_G0027075	Rasef	100	83.513	ENSPCOG00000022979	RASEF	82	83.196	Propithecus_coquereli
MGP_SPRETEiJ_G0027075	Rasef	100	82.406	ENSPVAG00000003682	RASEF	82	81.848	Pteropus_vampyrus
MGP_SPRETEiJ_G0027075	Rasef	98	50.360	ENSPNYG00000010579	rasef	82	50.839	Pundamilia_nyererei
MGP_SPRETEiJ_G0027075	Rasef	99	52.768	ENSPNAG00000016447	rasef	88	52.308	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027075	Rasef	100	89.209	ENSRNOG00000024190	Rasef	85	88.099	Rattus_norvegicus
MGP_SPRETEiJ_G0027075	Rasef	100	82.585	ENSRBIG00000039516	RASEF	83	80.750	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027075	Rasef	94	83.174	ENSRROG00000044397	RASEF	81	82.168	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027075	Rasef	100	83.662	ENSSBOG00000029298	RASEF	83	81.892	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027075	Rasef	100	65.295	ENSSFOG00015009014	rasef	86	63.902	Scleropages_formosus
MGP_SPRETEiJ_G0027075	Rasef	99	50.594	ENSSMAG00000000942	rasef	88	50.698	Scophthalmus_maximus
MGP_SPRETEiJ_G0027075	Rasef	82	52.071	ENSSDUG00000022228	rasef	78	52.367	Seriola_dumerili
MGP_SPRETEiJ_G0027075	Rasef	99	51.384	ENSSLDG00000001784	rasef	68	51.104	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027075	Rasef	99	67.742	ENSSPUG00000002899	RASEF	86	68.534	Sphenodon_punctatus
MGP_SPRETEiJ_G0027075	Rasef	99	52.349	ENSSPAG00000002442	rasef	76	52.403	Stegastes_partitus
MGP_SPRETEiJ_G0027075	Rasef	100	83.662	ENSSSCG00000040707	-	92	83.168	Sus_scrofa
MGP_SPRETEiJ_G0027075	Rasef	99	73.477	ENSTGUG00000003216	RASEF	84	72.817	Taeniopygia_guttata
MGP_SPRETEiJ_G0027075	Rasef	99	52.668	ENSTRUG00000011541	rasef	88	51.238	Takifugu_rubripes
MGP_SPRETEiJ_G0027075	Rasef	99	54.116	ENSTNIG00000006010	rasef	85	52.167	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027075	Rasef	100	74.194	ENSTTRG00000002061	RASEF	83	73.616	Tursiops_truncatus
MGP_SPRETEiJ_G0027075	Rasef	99	84.173	ENSUAMG00000021591	RASEF	97	84.228	Ursus_americanus
MGP_SPRETEiJ_G0027075	Rasef	99	84.353	ENSUMAG00000004670	RASEF	99	80.630	Ursus_maritimus
MGP_SPRETEiJ_G0027075	Rasef	99	83.273	ENSVVUG00000029736	RASEF	97	83.529	Vulpes_vulpes
MGP_SPRETEiJ_G0027075	Rasef	99	70.232	ENSXETG00000016758	mgc147600	84	69.508	Xenopus_tropicalis
MGP_SPRETEiJ_G0027075	Rasef	100	47.795	ENSXCOG00000005178	rasef	87	48.339	Xiphophorus_couchianus
MGP_SPRETEiJ_G0027075	Rasef	99	52.982	ENSXMAG00000015129	rasef	87	52.989	Xiphophorus_maculatus