EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027153 (Gene tree)
Gene ID: -
Gene Symbol: L1td1
Alias: ECAT11
Full Name: LINE-1 type transposase domain containing 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 12742 bases
Position: chr4:95467845-95480586
Accession: 3578435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0065550	Transposase_22	PF02994.14	1.9e-21	1	1
MGP_SPRETEiJ_P0065552	Transposase_22	PF02994.14	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0065549	-	703	-	MGP_SPRETEiJ_P0065549	147 (aa)	-	-
MGP_SPRETEiJ_T0065552	-	2493	-	MGP_SPRETEiJ_P0065552	830 (aa)	-	-
MGP_SPRETEiJ_T0065550	-	2909	-	MGP_SPRETEiJ_P0065550	771 (aa)	-	-
MGP_SPRETEiJ_T0065551	-	466	-	MGP_SPRETEiJ_P0065551	119 (aa)	-	UPI0001F78EA1

Gene Model

Click here to download MGP_SPRETEiJ_G0027153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027153	L1td1	59	52.800	ENSG00000240563	L1TD1	60	50.708	Homo_sapiens
MGP_SPRETEiJ_G0027153	L1td1	77	56.089	ENSCJAG00000038509	L1TD1	90	56.089	Callithrix_jacchus
MGP_SPRETEiJ_G0027153	L1td1	84	56.919	ENSCAFG00020012951	L1TD1	99	45.922	Canis_lupus_dingo
MGP_SPRETEiJ_G0027153	L1td1	85	49.847	ENSCLAG00000005428	-	78	49.847	Chinchilla_lanigera
MGP_SPRETEiJ_G0027153	L1td1	99	70.960	ENSCGRG00001024238	L1td1	97	78.723	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027153	L1td1	99	70.960	ENSCGRG00000011853	L1td1	97	78.723	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027153	L1td1	99	38.072	ENSDNOG00000040097	-	83	47.262	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027153	L1td1	99	40.091	ENSDNOG00000039645	-	84	50.802	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027153	L1td1	99	43.568	ENSEASG00005008811	L1TD1	99	42.476	Equus_asinus_asinus
MGP_SPRETEiJ_G0027153	L1td1	99	43.423	ENSECAG00000013248	L1TD1	53	50.585	Equus_caballus
MGP_SPRETEiJ_G0027153	L1td1	50	50.231	ENSFCAG00000042658	L1TD1	51	51.382	Felis_catus
MGP_SPRETEiJ_G0027153	L1td1	59	52.533	ENSGGOG00000026365	L1TD1	61	50.472	Gorilla_gorilla
MGP_SPRETEiJ_G0027153	L1td1	95	81.425	ENSMAUG00000020769	L1td1	99	72.449	Mesocricetus_auratus
MGP_SPRETEiJ_G0027153	L1td1	99	46.465	ENSMICG00000045847	L1TD1	51	52.752	Microcebus_murinus
MGP_SPRETEiJ_G0027153	L1td1	95	80.916	ENSMOCG00000007037	L1td1	86	81.771	Microtus_ochrogaster
MGP_SPRETEiJ_G0027153	L1td1	100	90.363	MGP_CAROLIEiJ_G0026185	L1td1	100	90.864	Mus_caroli
MGP_SPRETEiJ_G0027153	L1td1	100	96.547	ENSMUSG00000087166	L1td1	100	96.547	Mus_musculus
MGP_SPRETEiJ_G0027153	L1td1	51	88.832	MGP_PahariEiJ_G0028522	L1td1	51	87.736	Mus_pahari
MGP_SPRETEiJ_G0027153	L1td1	99	51.777	ENSNGAG00000000776	L1td1	79	66.753	Nannospalax_galili
MGP_SPRETEiJ_G0027153	L1td1	58	52.267	ENSPPAG00000043606	L1TD1	64	50.236	Pan_paniscus
MGP_SPRETEiJ_G0027153	L1td1	52	49.554	ENSPPRG00000011113	L1TD1	50	51.382	Panthera_pardus
MGP_SPRETEiJ_G0027153	L1td1	58	52.267	ENSPTRG00000034387	L1TD1	64	50.236	Pan_troglodytes
MGP_SPRETEiJ_G0027153	L1td1	99	71.778	ENSPEMG00000008068	L1td1	96	82.292	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027153	L1td1	99	45.204	ENSPPYG00000001286	L1TD1	99	44.861	Pongo_abelii
MGP_SPRETEiJ_G0027153	L1td1	53	32.292	ENSRNOG00000048904	AABR07004232.1	91	32.292	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	53	32.416	ENSRNOG00000048948	AABR07067082.1	91	32.416	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	53	31.498	ENSRNOG00000052559	AABR07037395.2	91	31.498	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	99	78.901	ENSRNOG00000050670	AABR07049326.1	99	77.278	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	53	32.292	ENSRNOG00000052690	AABR07042361.1	91	32.292	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	53	32.292	ENSRNOG00000045597	AABR07018132.1	91	32.292	Rattus_norvegicus
MGP_SPRETEiJ_G0027153	L1td1	99	43.041	ENSRBIG00000005782	L1TD1	60	50.474	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027153	L1td1	83	54.027	ENSTBEG00000015274	L1TD1	84	54.027	Tupaia_belangeri
MGP_SPRETEiJ_G0027153	L1td1	99	45.161	ENSUAMG00000002306	L1TD1	51	55.374	Ursus_americanus
MGP_SPRETEiJ_G0027153	L1td1	99	45.668	ENSUMAG00000014924	L1TD1	96	57.360	Ursus_maritimus