EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027237 (Gene tree)
Gene ID: -
Gene Symbol: Tut4
Alias: 6030404K05Rik|9230115F04Rik|Tent3a|Zcchc11
Full Name: terminal uridylyl transferase 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 101369 bases
Position: chr4:105465661-105567029
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0065963	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_SPRETEiJ_P0065963	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_SPRETEiJ_P0065964	zf-CCHC	PF00098.23	8e-11	1	2
MGP_SPRETEiJ_P0065964	zf-CCHC	PF00098.23	8e-11	2	2
MGP_SPRETEiJ_P0065963	PAP_assoc	PF03828.19	3.5e-28	1	2
MGP_SPRETEiJ_P0065963	PAP_assoc	PF03828.19	3.5e-28	2	2
MGP_SPRETEiJ_P0065964	PAP_assoc	PF03828.19	3.9e-28	1	2
MGP_SPRETEiJ_P0065964	PAP_assoc	PF03828.19	3.9e-28	2	2
MGP_SPRETEiJ_P0065965	PAP_assoc	PF03828.19	4.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0065963	-	6062	-	MGP_SPRETEiJ_P0065963	1644 (aa)	-	-
MGP_SPRETEiJ_T0065962	-	688	-	MGP_SPRETEiJ_P0065962	63 (aa)	-	UPI000059E052
MGP_SPRETEiJ_T0065967	-	541	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065966	-	637	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065965	-	3283	-	MGP_SPRETEiJ_P0065965	1006 (aa)	-	-
MGP_SPRETEiJ_T0065964	-	5867	-	MGP_SPRETEiJ_P0065964	1648 (aa)	-	-
MGP_SPRETEiJ_T0065969	-	591	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065968	-	567	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065970	-	483	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065971	-	2467	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0065972	-	587	-	MGP_SPRETEiJ_P0065972	105 (aa)	-	UPI000059E050

Gene Model

Click here to download MGP_SPRETEiJ_G0027237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0027237	Tut4	59	58.582	MGP_SPRETEiJ_G0019491	-	70	67.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027237	Tut4	100	86.639	ENSG00000134744	TUT4	100	90.741	Homo_sapiens
MGP_SPRETEiJ_G0027237	Tut4	100	86.511	ENSAMEG00000009340	TUT4	100	86.511	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027237	Tut4	53	57.795	ENSACIG00000018887	-	75	66.511	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027237	Tut4	57	64.679	ENSACIG00000018199	TUT4	95	63.817	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027237	Tut4	90	53.585	ENSAOCG00000007862	TUT4	95	53.535	Amphiprion_ocellaris
MGP_SPRETEiJ_G0027237	Tut4	90	53.597	ENSAPEG00000019857	TUT4	97	52.420	Amphiprion_percula
MGP_SPRETEiJ_G0027237	Tut4	52	61.649	ENSATEG00000022516	-	92	57.101	Anabas_testudineus
MGP_SPRETEiJ_G0027237	Tut4	83	63.672	ENSATEG00000003823	TUT4	92	63.377	Anabas_testudineus
MGP_SPRETEiJ_G0027237	Tut4	99	63.976	ENSAPLG00000006345	TUT4	100	64.096	Anas_platyrhynchos
MGP_SPRETEiJ_G0027237	Tut4	93	63.813	ENSACAG00000008282	TUT4	97	64.204	Anolis_carolinensis
MGP_SPRETEiJ_G0027237	Tut4	99	81.474	ENSANAG00000013486	TUT4	99	88.771	Aotus_nancymaae
MGP_SPRETEiJ_G0027237	Tut4	73	72.143	ENSACLG00000023312	TUT4	93	62.484	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027237	Tut4	74	60.330	ENSAMXG00000007030	TUT4	81	60.759	Astyanax_mexicanus
MGP_SPRETEiJ_G0027237	Tut4	100	85.354	ENSBTAG00000002721	TUT4	100	85.594	Bos_taurus
MGP_SPRETEiJ_G0027237	Tut4	100	84.643	ENSCJAG00000021588	TUT4	100	85.783	Callithrix_jacchus
MGP_SPRETEiJ_G0027237	Tut4	100	86.983	ENSCAFG00000003734	TUT4	100	86.983	Canis_familiaris
MGP_SPRETEiJ_G0027237	Tut4	55	91.887	ENSCAFG00020010923	-	93	91.182	Canis_lupus_dingo
MGP_SPRETEiJ_G0027237	Tut4	100	85.996	ENSCHIG00000023944	TUT4	100	85.996	Capra_hircus
MGP_SPRETEiJ_G0027237	Tut4	100	86.886	ENSTSYG00000009885	TUT4	100	87.066	Carlito_syrichta
MGP_SPRETEiJ_G0027237	Tut4	100	71.403	ENSCAPG00000005680	TUT4	100	72.727	Cavia_aperea
MGP_SPRETEiJ_G0027237	Tut4	100	81.107	ENSCPOG00000005086	TUT4	100	82.070	Cavia_porcellus
MGP_SPRETEiJ_G0027237	Tut4	93	91.892	ENSCCAG00000036903	TUT4	100	91.892	Cebus_capucinus
MGP_SPRETEiJ_G0027237	Tut4	57	58.627	ENSCCAG00000025142	-	67	62.295	Cebus_capucinus
MGP_SPRETEiJ_G0027237	Tut4	100	86.399	ENSCATG00000024618	TUT4	100	86.579	Cercocebus_atys
MGP_SPRETEiJ_G0027237	Tut4	100	86.257	ENSCLAG00000005255	TUT4	100	86.257	Chinchilla_lanigera
MGP_SPRETEiJ_G0027237	Tut4	100	86.639	ENSCSAG00000001277	TUT4	100	86.818	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027237	Tut4	80	94.975	ENSCHOG00000010995	TUT4	86	94.975	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027237	Tut4	88	71.174	ENSCPBG00000014796	TUT4	98	63.217	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027237	Tut4	100	86.081	ENSCANG00000036212	TUT4	99	89.985	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027237	Tut4	100	94.495	ENSCGRG00001020315	-	100	94.495	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027237	Tut4	100	94.374	ENSCGRG00000017571	Tut4	100	94.374	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027237	Tut4	56	64.615	ENSCSEG00000002476	TUT4	96	63.846	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027237	Tut4	71	64.219	ENSCVAG00000012659	TUT4	80	63.600	Cyprinodon_variegatus
MGP_SPRETEiJ_G0027237	Tut4	57	61.679	ENSDARG00000101404	CABZ01065131.1	99	60.119	Danio_rerio
MGP_SPRETEiJ_G0027237	Tut4	100	86.782	ENSDNOG00000013920	TUT4	100	86.782	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027237	Tut4	100	87.749	ENSDORG00000027891	Tut4	100	87.749	Dipodomys_ordii
MGP_SPRETEiJ_G0027237	Tut4	96	67.735	ENSETEG00000016298	TUT4	85	95.238	Echinops_telfairi
MGP_SPRETEiJ_G0027237	Tut4	61	58.280	ENSEBUG00000009834	TUT4	85	58.280	Eptatretus_burgeri
MGP_SPRETEiJ_G0027237	Tut4	100	87.095	ENSECAG00000021261	TUT4	100	87.335	Equus_caballus
MGP_SPRETEiJ_G0027237	Tut4	100	85.195	ENSEEUG00000003834	TUT4	95	85.740	Erinaceus_europaeus
MGP_SPRETEiJ_G0027237	Tut4	72	61.343	ENSELUG00000024167	TUT4	78	61.282	Esox_lucius
MGP_SPRETEiJ_G0027237	Tut4	100	86.399	ENSFCAG00000003246	TUT4	100	86.519	Felis_catus
MGP_SPRETEiJ_G0027237	Tut4	99	62.782	ENSFALG00000005607	TUT4	98	62.842	Ficedula_albicollis
MGP_SPRETEiJ_G0027237	Tut4	100	86.023	ENSFDAG00000016676	TUT4	100	86.023	Fukomys_damarensis
MGP_SPRETEiJ_G0027237	Tut4	57	62.651	ENSFHEG00000002296	-	97	62.405	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027237	Tut4	71	62.698	ENSGMOG00000001281	TUT4	97	56.342	Gadus_morhua
MGP_SPRETEiJ_G0027237	Tut4	94	67.693	ENSGALG00000010629	TUT4	99	67.855	Gallus_gallus
MGP_SPRETEiJ_G0027237	Tut4	56	65.008	ENSGAFG00000011427	-	96	63.919	Gambusia_affinis
MGP_SPRETEiJ_G0027237	Tut4	73	62.259	ENSGACG00000005282	-	93	61.788	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027237	Tut4	99	62.824	ENSGAGG00000020531	TUT4	99	67.988	Gopherus_agassizii
MGP_SPRETEiJ_G0027237	Tut4	54	60.903	ENSHBUG00000008564	-	100	60.620	Haplochromis_burtoni
MGP_SPRETEiJ_G0027237	Tut4	100	86.847	ENSHGLG00000000804	TUT4	100	86.847	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027237	Tut4	100	86.847	ENSHGLG00100002051	TUT4	100	86.847	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027237	Tut4	57	62.500	ENSHCOG00000009746	-	97	61.353	Hippocampus_comes
MGP_SPRETEiJ_G0027237	Tut4	67	69.343	ENSIPUG00000002638	zcchc11	79	61.119	Ictalurus_punctatus
MGP_SPRETEiJ_G0027237	Tut4	100	88.455	ENSSTOG00000015611	TUT4	100	88.455	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027237	Tut4	57	64.157	ENSKMAG00000017970	TUT4	96	62.651	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027237	Tut4	82	55.989	ENSLBEG00000006518	TUT4	87	55.705	Labrus_bergylta
MGP_SPRETEiJ_G0027237	Tut4	99	56.647	ENSLACG00000010748	TUT4	98	56.765	Latimeria_chalumnae
MGP_SPRETEiJ_G0027237	Tut4	77	64.937	ENSLOCG00000006248	TUT4	90	64.422	Lepisosteus_oculatus
MGP_SPRETEiJ_G0027237	Tut4	99	86.650	ENSLAFG00000003763	TUT4	100	86.650	Loxodonta_africana
MGP_SPRETEiJ_G0027237	Tut4	100	86.459	ENSMFAG00000011842	TUT4	100	86.639	Macaca_fascicularis
MGP_SPRETEiJ_G0027237	Tut4	97	85.203	ENSMMUG00000017023	TUT4	100	89.833	Macaca_mulatta
MGP_SPRETEiJ_G0027237	Tut4	98	81.674	ENSMNEG00000009839	TUT4	99	81.735	Macaca_nemestrina
MGP_SPRETEiJ_G0027237	Tut4	100	86.639	ENSMLEG00000036158	TUT4	97	89.985	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027237	Tut4	76	63.565	ENSMAMG00000014890	TUT4	83	63.089	Mastacembelus_armatus
MGP_SPRETEiJ_G0027237	Tut4	69	72.143	ENSMZEG00005017227	TUT4	90	62.484	Maylandia_zebra
MGP_SPRETEiJ_G0027237	Tut4	80	71.439	ENSMGAG00000011185	TUT4	100	71.439	Meleagris_gallopavo
MGP_SPRETEiJ_G0027237	Tut4	99	91.608	ENSMAUG00000010283	Tut4	99	91.608	Mesocricetus_auratus
MGP_SPRETEiJ_G0027237	Tut4	100	84.652	ENSMICG00000015853	TUT4	100	84.772	Microcebus_murinus
MGP_SPRETEiJ_G0027237	Tut4	99	91.508	ENSMOCG00000012851	Tut4	99	91.508	Microtus_ochrogaster
MGP_SPRETEiJ_G0027237	Tut4	57	62.794	ENSMMOG00000016870	-	98	63.249	Mola_mola
MGP_SPRETEiJ_G0027237	Tut4	52	63.889	ENSMMOG00000017546	-	55	66.398	Mola_mola
MGP_SPRETEiJ_G0027237	Tut4	99	67.299	ENSMODG00000000618	TUT4	99	67.239	Monodelphis_domestica
MGP_SPRETEiJ_G0027237	Tut4	57	62.991	ENSMALG00000014488	-	96	62.293	Monopterus_albus
MGP_SPRETEiJ_G0027237	Tut4	100	98.908	MGP_CAROLIEiJ_G0026268	Tut4	100	98.908	Mus_caroli
MGP_SPRETEiJ_G0027237	Tut4	100	99.454	ENSMUSG00000034610	Tut4	100	99.454	Mus_musculus
MGP_SPRETEiJ_G0027237	Tut4	100	97.392	MGP_PahariEiJ_G0028601	Tut4	100	97.392	Mus_pahari
MGP_SPRETEiJ_G0027237	Tut4	100	84.505	ENSMPUG00000006880	TUT4	100	84.204	Mustela_putorius_furo
MGP_SPRETEiJ_G0027237	Tut4	100	86.197	ENSMLUG00000001067	TUT4	100	86.076	Myotis_lucifugus
MGP_SPRETEiJ_G0027237	Tut4	99	86.926	ENSNGAG00000011508	Tut4	99	86.926	Nannospalax_galili
MGP_SPRETEiJ_G0027237	Tut4	57	64.762	ENSNBRG00000005683	-	96	64.184	Neolamprologus_brichardi
MGP_SPRETEiJ_G0027237	Tut4	100	86.988	ENSNLEG00000017998	TUT4	97	90.440	Nomascus_leucogenys
MGP_SPRETEiJ_G0027237	Tut4	82	68.373	ENSMEUG00000003865	TUT4	84	69.202	Notamacropus_eugenii
MGP_SPRETEiJ_G0027237	Tut4	100	72.062	ENSOPRG00000016362	TUT4	100	72.302	Ochotona_princeps
MGP_SPRETEiJ_G0027237	Tut4	100	84.976	ENSODEG00000007328	TUT4	100	84.976	Octodon_degus
MGP_SPRETEiJ_G0027237	Tut4	82	62.565	ENSONIG00000019455	TUT4	95	63.333	Oreochromis_niloticus
MGP_SPRETEiJ_G0027237	Tut4	92	64.186	ENSOANG00000012864	TUT4	99	64.347	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027237	Tut4	100	85.594	ENSOCUG00000002390	TUT4	100	85.783	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027237	Tut4	57	65.280	ENSORLG00000013135	-	95	63.578	Oryzias_latipes
MGP_SPRETEiJ_G0027237	Tut4	57	65.550	ENSORLG00020002631	-	95	63.898	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027237	Tut4	57	65.605	ENSORLG00015001219	-	95	64.593	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027237	Tut4	56	61.755	ENSOMEG00000015574	-	95	61.611	Oryzias_melastigma
MGP_SPRETEiJ_G0027237	Tut4	100	85.312	ENSOGAG00000005425	TUT4	100	85.552	Otolemur_garnettii
MGP_SPRETEiJ_G0027237	Tut4	100	86.192	ENSOARG00000005494	TUT4	100	86.192	Ovis_aries
MGP_SPRETEiJ_G0027237	Tut4	100	84.917	ENSPPAG00000037653	TUT4	100	86.700	Pan_paniscus
MGP_SPRETEiJ_G0027237	Tut4	100	87.238	ENSPPRG00000020521	TUT4	100	87.358	Panthera_pardus
MGP_SPRETEiJ_G0027237	Tut4	100	87.238	ENSPTIG00000010511	TUT4	100	87.358	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027237	Tut4	100	86.759	ENSPTRG00000000740	TUT4	100	86.938	Pan_troglodytes
MGP_SPRETEiJ_G0027237	Tut4	100	85.006	ENSPANG00000005042	TUT4	100	85.185	Papio_anubis
MGP_SPRETEiJ_G0027237	Tut4	57	64.134	ENSPKIG00000004670	TUT4	91	62.725	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027237	Tut4	99	63.114	ENSPSIG00000016704	TUT4	100	63.054	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027237	Tut4	99	92.008	ENSPEMG00000023722	Tut4	99	92.008	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027237	Tut4	99	66.250	ENSPCIG00000022380	TUT4	98	66.270	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027237	Tut4	81	55.507	ENSPFOG00000002439	TUT4	95	55.102	Poecilia_formosa
MGP_SPRETEiJ_G0027237	Tut4	56	64.386	ENSPLAG00000008701	-	96	63.297	Poecilia_latipinna
MGP_SPRETEiJ_G0027237	Tut4	56	64.230	ENSPMEG00000006996	-	96	63.142	Poecilia_mexicana
MGP_SPRETEiJ_G0027237	Tut4	100	86.426	ENSPPYG00000001347	TUT4	100	86.667	Pongo_abelii
MGP_SPRETEiJ_G0027237	Tut4	67	98.413	ENSPCAG00000013380	TUT4	92	74.736	Procavia_capensis
MGP_SPRETEiJ_G0027237	Tut4	100	83.813	ENSPCOG00000007824	TUT4	100	83.873	Propithecus_coquereli
MGP_SPRETEiJ_G0027237	Tut4	100	77.804	ENSPVAG00000009804	TUT4	100	78.164	Pteropus_vampyrus
MGP_SPRETEiJ_G0027237	Tut4	69	72.143	ENSPNYG00000023175	TUT4	90	62.613	Pundamilia_nyererei
MGP_SPRETEiJ_G0027237	Tut4	72	59.956	ENSPNAG00000022786	TUT4	88	54.702	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027237	Tut4	100	93.571	ENSRNOG00000052062	Tut4	100	93.571	Rattus_norvegicus
MGP_SPRETEiJ_G0027237	Tut4	100	83.823	ENSRBIG00000027989	TUT4	100	83.942	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027237	Tut4	100	86.579	ENSRROG00000034868	TUT4	100	90.463	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027237	Tut4	100	85.612	ENSSBOG00000013661	TUT4	100	85.731	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027237	Tut4	57	58.442	ENSSBOG00000020099	-	71	61.564	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027237	Tut4	99	65.706	ENSSHAG00000006231	TUT4	100	65.946	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027237	Tut4	71	63.956	ENSSFOG00015013524	zcchc11	84	63.956	Scleropages_formosus
MGP_SPRETEiJ_G0027237	Tut4	76	63.995	ENSSMAG00000016072	TUT4	79	63.601	Scophthalmus_maximus
MGP_SPRETEiJ_G0027237	Tut4	57	64.114	ENSSDUG00000021923	TUT4	96	63.268	Seriola_dumerili
MGP_SPRETEiJ_G0027237	Tut4	88	89.439	ENSSARG00000009798	TUT4	89	89.439	Sorex_araneus
MGP_SPRETEiJ_G0027237	Tut4	97	59.657	ENSSPUG00000013287	TUT4	91	64.367	Sphenodon_punctatus
MGP_SPRETEiJ_G0027237	Tut4	57	57.421	ENSSPAG00000008141	-	96	56.587	Stegastes_partitus
MGP_SPRETEiJ_G0027237	Tut4	100	87.719	ENSSSCG00000003859	TUT4	100	88.109	Sus_scrofa
MGP_SPRETEiJ_G0027237	Tut4	99	64.157	ENSTGUG00000009011	TUT4	100	63.855	Taeniopygia_guttata
MGP_SPRETEiJ_G0027237	Tut4	58	75.194	ENSTNIG00000002785	-	86	76.875	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027237	Tut4	75	99.574	ENSTBEG00000001230	TUT4	73	99.574	Tupaia_belangeri
MGP_SPRETEiJ_G0027237	Tut4	100	86.886	ENSTTRG00000016142	TUT4	100	87.126	Tursiops_truncatus
MGP_SPRETEiJ_G0027237	Tut4	100	87.214	ENSUAMG00000000759	TUT4	100	87.214	Ursus_americanus
MGP_SPRETEiJ_G0027237	Tut4	100	85.021	ENSUMAG00000022669	TUT4	100	84.721	Ursus_maritimus
MGP_SPRETEiJ_G0027237	Tut4	100	81.366	ENSVPAG00000000910	TUT4	100	81.486	Vicugna_pacos
MGP_SPRETEiJ_G0027237	Tut4	100	86.713	ENSVVUG00000002703	TUT4	99	89.514	Vulpes_vulpes
MGP_SPRETEiJ_G0027237	Tut4	82	60.494	ENSXETG00000008061	tut4	98	60.276	Xenopus_tropicalis
MGP_SPRETEiJ_G0027237	Tut4	56	64.587	ENSXCOG00000007204	-	96	63.495	Xiphophorus_couchianus
MGP_SPRETEiJ_G0027237	Tut4	56	64.743	ENSXMAG00000000751	-	96	63.651	Xiphophorus_maculatus