EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0027238 (Gene tree)
Gene ID
-
Gene Symbol
Prpf38a
Alias
2410002M20Rik
Full Name
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
18157 bases
Position
chr4:105570767-105588923
Accession
1916962
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0065975PRP38PF03371.153.8e-6111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0065974-818-MGP_SPRETEiJ_P0065974203 (aa)--
MGP_SPRETEiJ_T0065975-1514-MGP_SPRETEiJ_P0065975312 (aa)--
MGP_SPRETEiJ_T0065976-2882--- (aa)--
MGP_SPRETEiJ_T0065973-2233--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0027238's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027238's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSG00000134748PRPF38A10098.397Homo_sapiens
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSAPOG00000011652prpf38a10080.831Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSAMEG00000009319PRPF38A10098.397Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSACIG00000012292prpf38a10075.321Amphilophus_citrinellus
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSAOCG00000018004prpf38a10080.831Amphiprion_ocellaris
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSAPEG00000021414prpf38a10080.831Amphiprion_percula
MGP_SPRETEiJ_G0027238Prpf38a9293.583ENSATEG00000004608prpf38a10081.150Anabas_testudineus
MGP_SPRETEiJ_G0027238Prpf38a7996.761ENSAPLG00000005827PRPF38A9996.761Anas_platyrhynchos
MGP_SPRETEiJ_G0027238Prpf38a10094.231ENSACAG00000008249PRPF38A10094.231Anolis_carolinensis
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSANAG00000027839PRPF38A10098.397Aotus_nancymaae
MGP_SPRETEiJ_G0027238Prpf38a10067.405ENSANAG00000029204-10062.342Aotus_nancymaae
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSACLG00000021595prpf38a10079.553Astatotilapia_calliptera
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSAMXG00000029274prpf38a10082.428Astyanax_mexicanus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSBTAG00000002720PRPF38A10098.397Bos_taurus
MGP_SPRETEiJ_G0027238Prpf38a9661.026WBGene00008380prp-386760.185Caenorhabditis_elegans
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCJAG00000021594PRPF38A10098.397Callithrix_jacchus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCAFG00000003740PRPF38A10098.397Canis_familiaris
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCAFG00020010939PRPF38A10098.397Canis_lupus_dingo
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCHIG00000024730PRPF38A10098.397Capra_hircus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSTSYG00000009868-10098.397Carlito_syrichta
MGP_SPRETEiJ_G0027238Prpf38a8697.026ENSTSYG00000031994-9597.026Carlito_syrichta
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCPOG00000005079PRPF38A10098.397Cavia_porcellus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCCAG00000026502PRPF38A10098.077Cebus_capucinus
MGP_SPRETEiJ_G0027238Prpf38a10063.782ENSCATG00000044190-10056.731Cercocebus_atys
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCATG00000032296PRPF38A10098.397Cercocebus_atys
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCLAG00000005816PRPF38A10098.397Chinchilla_lanigera
MGP_SPRETEiJ_G0027238Prpf38a7896.875ENSCHOG00000008388PRPF38A7796.875Choloepus_hoffmanni
MGP_SPRETEiJ_G0027238Prpf38a10097.537ENSCPBG00000014791PRPF38A10097.115Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027238Prpf38a9873.367ENSCSAVG00000009580-7866.102Ciona_savignyi
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSCANG00000032608PRPF38A10098.328Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027238Prpf38a9382.979ENSCGRG00001002557-7884.416Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027238Prpf38a10098.718ENSCGRG00001018502-10098.718Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027238Prpf38a10098.718ENSCGRG00000014868Prpf38a10098.718Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSCSEG00000001269prpf38a7986.580Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027238Prpf38a9393.617ENSCVAG00000012305prpf38a10081.789Cyprinodon_variegatus
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSDARG00000039213prpf38a10081.789Danio_rerio
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSDNOG00000042326PRPF38A10098.397Dasypus_novemcinctus
MGP_SPRETEiJ_G0027238Prpf38a9091.803ENSDORG00000023691-7886.784Dipodomys_ordii
MGP_SPRETEiJ_G0027238Prpf38a9091.803ENSDORG00000025371-7886.784Dipodomys_ordii
MGP_SPRETEiJ_G0027238Prpf38a10084.936ENSDORG00000023857-10098.958Dipodomys_ordii
MGP_SPRETEiJ_G0027238Prpf38a9873.737FBgn0050342Prp385775.000Drosophila_melanogaster
MGP_SPRETEiJ_G0027238Prpf38a9386.772ENSEBUG00000012588prpf38a7581.116Eptatretus_burgeri
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSEASG00005014427PRPF38A10098.397Equus_asinus_asinus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSECAG00000022628PRPF38A10098.397Equus_caballus
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSELUG00000021094prpf38a10079.872Esox_lucius
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSFCAG00000002518PRPF38A10098.397Felis_catus
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSFALG00000003612-7789.610Ficedula_albicollis
MGP_SPRETEiJ_G0027238Prpf38a8795.941ENSFALG00000005598-10095.941Ficedula_albicollis
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSFDAG00000011287PRPF38A10098.077Fukomys_damarensis
MGP_SPRETEiJ_G0027238Prpf38a9393.085ENSFHEG00000014317prpf38a7888.312Fundulus_heteroclitus
MGP_SPRETEiJ_G0027238Prpf38a8293.976ENSGMOG00000011384prpf38a5493.976Gadus_morhua
MGP_SPRETEiJ_G0027238Prpf38a10098.030ENSGALG00000010627PRPF38A10097.436Gallus_gallus
MGP_SPRETEiJ_G0027238Prpf38a9394.149ENSGAFG00000012422prpf38a10081.789Gambusia_affinis
MGP_SPRETEiJ_G0027238Prpf38a9389.894ENSGACG00000005423prpf38a10078.730Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027238Prpf38a10097.537ENSGAGG00000020547PRPF38A10097.436Gopherus_agassizii
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSGGOG00000003940PRPF38A10098.397Gorilla_gorilla
MGP_SPRETEiJ_G0027238Prpf38a9390.476ENSHBUG00000020572prpf38a8090.426Haplochromis_burtoni
MGP_SPRETEiJ_G0027238Prpf38a10083.013ENSHGLG00000007918-10082.692Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSHGLG00000000475PRPF38A10098.397Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSHGLG00100008935PRPF38A10098.397Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027238Prpf38a10083.013ENSHGLG00100003928-10082.692Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027238Prpf38a9091.209ENSHCOG00000020781prpf38a5990.957Hippocampus_comes
MGP_SPRETEiJ_G0027238Prpf38a9392.063ENSIPUG00000005757prpf38a7587.069Ictalurus_punctatus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSSTOG00000015610PRPF38A10098.397Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027238Prpf38a10097.756ENSJJAG00000015811Prpf38a10097.756Jaculus_jaculus
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSKMAG00000006588prpf38a10081.470Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027238Prpf38a9389.947ENSLBEG00000020585prpf38a10078.914Labrus_bergylta
MGP_SPRETEiJ_G0027238Prpf38a10091.667ENSLACG00000011495PRPF38A10091.667Latimeria_chalumnae
MGP_SPRETEiJ_G0027238Prpf38a9392.063ENSLOCG00000006262prpf38a10080.831Lepisosteus_oculatus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSLAFG00000025862PRPF38A10098.397Loxodonta_africana
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSMFAG00000039449PRPF38A10098.397Macaca_fascicularis
MGP_SPRETEiJ_G0027238Prpf38a5481.651ENSMMUG00000042190-9781.651Macaca_mulatta
MGP_SPRETEiJ_G0027238Prpf38a8797.426ENSMMUG00000014333PRPF38A9897.426Macaca_mulatta
MGP_SPRETEiJ_G0027238Prpf38a10064.103ENSMNEG00000040242-10057.372Macaca_nemestrina
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSMNEG00000031221PRPF38A10098.397Macaca_nemestrina
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSMLEG00000041105PRPF38A10098.397Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSMAMG00000015431prpf38a10080.831Mastacembelus_armatus
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSMZEG00005017838prpf38a10079.553Maylandia_zebra
MGP_SPRETEiJ_G0027238Prpf38a10098.030ENSMGAG00000011176PRPF38A10097.324Meleagris_gallopavo
MGP_SPRETEiJ_G0027238Prpf38a9194.022ENSMAUG00000018029-8793.939Mesocricetus_auratus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSMICG00000014193PRPF38A10098.397Microcebus_murinus
MGP_SPRETEiJ_G0027238Prpf38a10098.718ENSMOCG00000013080Prpf38a10098.718Microtus_ochrogaster
MGP_SPRETEiJ_G0027238Prpf38a9392.021ENSMMOG00000016972prpf38a8187.013Mola_mola
MGP_SPRETEiJ_G0027238Prpf38a10096.805ENSMODG00000000644PRPF38A10096.805Monodelphis_domestica
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSMALG00000019363prpf38a9780.831Monopterus_albus
MGP_SPRETEiJ_G0027238Prpf38a100100.000MGP_CAROLIEiJ_G0026269Prpf38a10099.679Mus_caroli
MGP_SPRETEiJ_G0027238Prpf38a100100.000ENSMUSG00000063800Prpf38a10099.679Mus_musculus
MGP_SPRETEiJ_G0027238Prpf38a100100.000MGP_PahariEiJ_G0028602Prpf38a10099.679Mus_pahari
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSMPUG00000006896PRPF38A10098.397Mustela_putorius_furo
MGP_SPRETEiJ_G0027238Prpf38a10098.718ENSNGAG00000011884Prpf38a10098.718Nannospalax_galili
MGP_SPRETEiJ_G0027238Prpf38a9388.830ENSNBRG00000004013prpf38a7483.983Neolamprologus_brichardi
MGP_SPRETEiJ_G0027238Prpf38a9772.185ENSNLEG00000012592-7168.398Nomascus_leucogenys
MGP_SPRETEiJ_G0027238Prpf38a9398.270ENSNLEG00000017999PRPF38A9398.270Nomascus_leucogenys
MGP_SPRETEiJ_G0027238Prpf38a10066.346ENSNLEG00000033398-9466.346Nomascus_leucogenys
MGP_SPRETEiJ_G0027238Prpf38a10093.910ENSMEUG00000003860PRPF38A10093.910Notamacropus_eugenii
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSOPRG00000008985PRPF38A10098.750Ochotona_princeps
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSODEG00000005869PRPF38A10098.397Octodon_degus
MGP_SPRETEiJ_G0027238Prpf38a9390.957ENSONIG00000007816prpf38a10079.872Oreochromis_niloticus
MGP_SPRETEiJ_G0027238Prpf38a10064.331ENSOANG00000009541-10064.331Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSOCUG00000000963PRPF38A10098.397Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027238Prpf38a9393.085ENSORLG00000013485prpf38a9981.731Oryzias_latipes
MGP_SPRETEiJ_G0027238Prpf38a9393.085ENSORLG00020002130prpf38a9981.731Oryzias_latipes_hni
MGP_SPRETEiJ_G0027238Prpf38a9393.085ENSORLG00015021393prpf38a9981.410Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSOMEG00000016333prpf38a10081.150Oryzias_melastigma
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSOGAG00000005423PRPF38A10098.397Otolemur_garnettii
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSOARG00000005373PRPF38A10098.397Ovis_aries
MGP_SPRETEiJ_G0027238Prpf38a10076.603ENSPPAG00000033867-10076.603Pan_paniscus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPPAG00000030905PRPF38A10098.397Pan_paniscus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPPRG00000013268PRPF38A10098.397Panthera_pardus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPTIG00000015419PRPF38A10098.397Panthera_tigris_altaica
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPTRG00000000739PRPF38A10098.397Pan_troglodytes
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPANG00000015483PRPF38A10098.397Papio_anubis
MGP_SPRETEiJ_G0027238Prpf38a9389.894ENSPKIG00000011439prpf38a10079.487Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027238Prpf38a10097.537ENSPSIG00000017487PRPF38A10096.795Pelodiscus_sinensis
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSPMGG00000021352prpf38a7987.879Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027238Prpf38a10098.718ENSPEMG00000023277-10098.718Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027238Prpf38a10091.746ENSPEMG00000011212-10091.111Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027238Prpf38a6790.511ENSPMAG00000005561prpf38a10090.511Petromyzon_marinus
MGP_SPRETEiJ_G0027238Prpf38a10096.486ENSPCIG00000022369-10096.486Phascolarctos_cinereus
MGP_SPRETEiJ_G0027238Prpf38a9394.149ENSPFOG00000004248prpf38a10081.789Poecilia_formosa
MGP_SPRETEiJ_G0027238Prpf38a9394.149ENSPLAG00000010328prpf38a10081.789Poecilia_latipinna
MGP_SPRETEiJ_G0027238Prpf38a9394.149ENSPMEG00000011804prpf38a10081.789Poecilia_mexicana
MGP_SPRETEiJ_G0027238Prpf38a9393.617ENSPREG00000002835prpf38a5893.617Poecilia_reticulata
MGP_SPRETEiJ_G0027238Prpf38a10089.905ENSPPYG00000001348PRPF38A10089.905Pongo_abelii
MGP_SPRETEiJ_G0027238Prpf38a10097.756ENSPCAG00000013328PRPF38A10097.756Procavia_capensis
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPCOG00000016387-10098.397Propithecus_coquereli
MGP_SPRETEiJ_G0027238Prpf38a9382.979ENSPCOG00000020709-7679.654Propithecus_coquereli
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSPVAG00000009803PRPF38A10098.397Pteropus_vampyrus
MGP_SPRETEiJ_G0027238Prpf38a9390.426ENSPNYG00000005571prpf38a10079.553Pundamilia_nyererei
MGP_SPRETEiJ_G0027238Prpf38a9392.021ENSPNAG00000010399prpf38a10082.428Pygocentrus_nattereri
MGP_SPRETEiJ_G0027238Prpf38a10099.038ENSRNOG00000009451Prpf38a10099.038Rattus_norvegicus
MGP_SPRETEiJ_G0027238Prpf38a10062.179ENSRBIG00000034053-10076.230Rhinopithecus_bieti
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSRBIG00000036442PRPF38A10098.397Rhinopithecus_bieti
MGP_SPRETEiJ_G0027238Prpf38a9877.451ENSRROG00000040003-7678.788Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSRROG00000032788PRPF38A10098.397Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSSBOG00000019515PRPF38A10098.397Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027238Prpf38a9682.990ENSSHAG00000006029-7480.543Sarcophilus_harrisii
MGP_SPRETEiJ_G0027238Prpf38a8794.096ENSSHAG00000006906-10094.465Sarcophilus_harrisii
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSSFOG00015013572prpf38a10078.914Scleropages_formosus
MGP_SPRETEiJ_G0027238Prpf38a9390.957ENSSMAG00000015379prpf38a7586.580Scophthalmus_maximus
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSSDUG00000001324prpf38a10081.470Seriola_dumerili
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSSLDG00000014803prpf38a10081.470Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027238Prpf38a10081.410ENSSARG00000014458PRPF38A10081.410Sorex_araneus
MGP_SPRETEiJ_G0027238Prpf38a10094.551ENSSPUG00000013259PRPF38A10094.551Sphenodon_punctatus
MGP_SPRETEiJ_G0027238Prpf38a10071.921ENSSPAG00000010449prpf38a10063.462Stegastes_partitus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSSSCG00000028288PRPF38A10098.397Sus_scrofa
MGP_SPRETEiJ_G0027238Prpf38a10092.949ENSTGUG00000008995PRPF38A10092.949Taeniopygia_guttata
MGP_SPRETEiJ_G0027238Prpf38a9391.489ENSTRUG00000003374prpf38a7187.013Takifugu_rubripes
MGP_SPRETEiJ_G0027238Prpf38a9389.474ENSTNIG00000005533prpf38a10079.683Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSTBEG00000000725PRPF38A10097.756Tupaia_belangeri
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSTTRG00000016139PRPF38A10098.397Tursiops_truncatus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSUAMG00000000625PRPF38A10098.397Ursus_americanus
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSUMAG00000022674PRPF38A10098.397Ursus_maritimus
MGP_SPRETEiJ_G0027238Prpf38a10098.030ENSVPAG00000000907PRPF38A10092.628Vicugna_pacos
MGP_SPRETEiJ_G0027238Prpf38a10098.522ENSVVUG00000004475PRPF38A10098.397Vulpes_vulpes
MGP_SPRETEiJ_G0027238Prpf38a9392.553ENSXETG00000008060prpf38a10087.540Xenopus_tropicalis
MGP_SPRETEiJ_G0027238Prpf38a9391.579ENSXCOG00000007393prpf38a10074.841Xiphophorus_couchianus
MGP_SPRETEiJ_G0027238Prpf38a9394.149ENSXMAG00000026143prpf38a10081.789Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us