EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027408 (Gene tree)
Gene ID: -
Gene Symbol: Trit1
Alias: 2310075G14Rik|MOD5
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 41816 bases
Position: chr4:118978298-119020113
Accession: 1914216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0066728	IPPT	PF01715.17	3.8e-65	1	1
MGP_SPRETEiJ_P0066728	zf-C2H2_jaz	PF12171.8	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0066727	-	1968	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0066728	-	2078	-	MGP_SPRETEiJ_P0066728	467 (aa)	-	-
MGP_SPRETEiJ_T0066729	-	512	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027408	Trit1	100	89.293	ENSG00000043514	TRIT1	99	91.124	Homo_sapiens
MGP_SPRETEiJ_G0027408	Trit1	89	64.286	ENSAPOG00000020918	trit1	94	62.785	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027408	Trit1	100	87.794	ENSAMEG00000004342	TRIT1	100	87.794	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027408	Trit1	85	64.573	ENSACIG00000017409	trit1	92	63.109	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027408	Trit1	92	61.486	ENSAOCG00000009850	trit1	92	61.486	Amphiprion_ocellaris
MGP_SPRETEiJ_G0027408	Trit1	92	61.486	ENSAPEG00000001481	trit1	92	61.486	Amphiprion_percula
MGP_SPRETEiJ_G0027408	Trit1	96	59.161	ENSATEG00000005426	trit1	89	60.137	Anabas_testudineus
MGP_SPRETEiJ_G0027408	Trit1	74	66.193	ENSAPLG00000011421	TRIT1	100	66.193	Anas_platyrhynchos
MGP_SPRETEiJ_G0027408	Trit1	87	73.399	ENSACAG00000002280	TRIT1	83	73.399	Anolis_carolinensis
MGP_SPRETEiJ_G0027408	Trit1	100	88.223	ENSANAG00000030732	TRIT1	100	88.601	Aotus_nancymaae
MGP_SPRETEiJ_G0027408	Trit1	99	57.708	ENSACLG00000004920	trit1	98	58.422	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027408	Trit1	91	62.471	ENSAMXG00000010959	trit1	90	63.659	Astyanax_mexicanus
MGP_SPRETEiJ_G0027408	Trit1	100	87.580	ENSBTAG00000013832	TRIT1	100	87.580	Bos_taurus
MGP_SPRETEiJ_G0027408	Trit1	84	34.793	WBGene00001740	gro-1	95	34.434	Caenorhabditis_elegans
MGP_SPRETEiJ_G0027408	Trit1	100	88.437	ENSCJAG00000002620	TRIT1	100	88.437	Callithrix_jacchus
MGP_SPRETEiJ_G0027408	Trit1	100	86.966	ENSCAFG00000003048	TRIT1	100	86.966	Canis_familiaris
MGP_SPRETEiJ_G0027408	Trit1	100	85.031	ENSCAFG00020003875	TRIT1	97	89.174	Canis_lupus_dingo
MGP_SPRETEiJ_G0027408	Trit1	98	85.683	ENSCHIG00000013259	TRIT1	98	85.683	Capra_hircus
MGP_SPRETEiJ_G0027408	Trit1	97	88.987	ENSTSYG00000004363	TRIT1	100	88.865	Carlito_syrichta
MGP_SPRETEiJ_G0027408	Trit1	77	85.237	ENSCAPG00000017001	TRIT1	93	85.237	Cavia_aperea
MGP_SPRETEiJ_G0027408	Trit1	100	86.510	ENSCPOG00000012820	TRIT1	100	86.510	Cavia_porcellus
MGP_SPRETEiJ_G0027408	Trit1	100	86.938	ENSCCAG00000031271	TRIT1	100	86.938	Cebus_capucinus
MGP_SPRETEiJ_G0027408	Trit1	99	83.156	ENSCATG00000034344	TRIT1	97	88.529	Cercocebus_atys
MGP_SPRETEiJ_G0027408	Trit1	100	85.867	ENSCLAG00000009828	TRIT1	100	85.867	Chinchilla_lanigera
MGP_SPRETEiJ_G0027408	Trit1	88	87.835	ENSCSAG00000001137	TRIT1	100	87.835	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027408	Trit1	97	85.430	ENSCHOG00000000435	TRIT1	100	85.225	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027408	Trit1	87	42.857	ENSCSAVG00000002050	-	91	42.857	Ciona_savignyi
MGP_SPRETEiJ_G0027408	Trit1	100	87.152	ENSCANG00000043008	TRIT1	100	87.152	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027408	Trit1	100	91.649	ENSCGRG00001001894	Trit1	100	91.649	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027408	Trit1	88	90.557	ENSCGRG00000007059	Trit1	91	90.465	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027408	Trit1	88	60.621	ENSCSEG00000009574	trit1	93	60.183	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027408	Trit1	96	59.688	ENSDARG00000032876	trit1	95	65.815	Danio_rerio
MGP_SPRETEiJ_G0027408	Trit1	97	75.875	ENSDNOG00000001994	TRIT1	100	75.947	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027408	Trit1	96	78.540	ENSDORG00000012449	Trit1	98	78.540	Dipodomys_ordii
MGP_SPRETEiJ_G0027408	Trit1	87	41.230	FBgn0043799	CG31381	90	41.230	Drosophila_melanogaster
MGP_SPRETEiJ_G0027408	Trit1	87	88.434	ENSETEG00000008733	TRIT1	98	88.434	Echinops_telfairi
MGP_SPRETEiJ_G0027408	Trit1	88	57.005	ENSEBUG00000012845	trit1	92	57.005	Eptatretus_burgeri
MGP_SPRETEiJ_G0027408	Trit1	98	85.622	ENSECAG00000010597	TRIT1	92	85.895	Equus_caballus
MGP_SPRETEiJ_G0027408	Trit1	100	66.808	ENSEEUG00000009269	TRIT1	100	66.808	Erinaceus_europaeus
MGP_SPRETEiJ_G0027408	Trit1	90	56.368	ENSELUG00000017278	trit1	84	57.740	Esox_lucius
MGP_SPRETEiJ_G0027408	Trit1	97	88.767	ENSFCAG00000006029	TRIT1	100	88.223	Felis_catus
MGP_SPRETEiJ_G0027408	Trit1	85	73.250	ENSFALG00000000532	TRIT1	99	73.250	Ficedula_albicollis
MGP_SPRETEiJ_G0027408	Trit1	94	84.292	ENSFDAG00000003098	TRIT1	99	84.292	Fukomys_damarensis
MGP_SPRETEiJ_G0027408	Trit1	68	55.312	ENSFHEG00000022274	trit1	96	55.312	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027408	Trit1	91	61.644	ENSGMOG00000006522	trit1	98	62.500	Gadus_morhua
MGP_SPRETEiJ_G0027408	Trit1	92	73.318	ENSGALG00000003851	TRIT1	89	76.471	Gallus_gallus
MGP_SPRETEiJ_G0027408	Trit1	75	61.017	ENSGAFG00000018636	trit1	100	60.773	Gambusia_affinis
MGP_SPRETEiJ_G0027408	Trit1	91	61.468	ENSGACG00000008493	trit1	95	62.740	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027408	Trit1	87	74.321	ENSGAGG00000000522	TRIT1	99	74.321	Gopherus_agassizii
MGP_SPRETEiJ_G0027408	Trit1	100	89.079	ENSGGOG00000010070	TRIT1	100	89.079	Gorilla_gorilla
MGP_SPRETEiJ_G0027408	Trit1	99	58.333	ENSHBUG00000018999	trit1	98	59.062	Haplochromis_burtoni
MGP_SPRETEiJ_G0027408	Trit1	97	77.143	ENSHGLG00000009564	-	98	77.074	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027408	Trit1	97	86.253	ENSHGLG00000010308	-	97	86.253	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027408	Trit1	99	86.522	ENSHGLG00100015382	-	99	86.522	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027408	Trit1	82	67.624	ENSHGLG00100018159	-	99	67.624	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027408	Trit1	88	62.028	ENSHCOG00000006755	trit1	82	62.590	Hippocampus_comes
MGP_SPRETEiJ_G0027408	Trit1	91	62.700	ENSIPUG00000021822	trit1	90	62.700	Ictalurus_punctatus
MGP_SPRETEiJ_G0027408	Trit1	100	88.651	ENSSTOG00000006446	TRIT1	97	88.651	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027408	Trit1	96	83.964	ENSJJAG00000000316	-	99	83.964	Jaculus_jaculus
MGP_SPRETEiJ_G0027408	Trit1	98	81.304	ENSJJAG00000000300	-	98	81.304	Jaculus_jaculus
MGP_SPRETEiJ_G0027408	Trit1	94	61.625	ENSKMAG00000021788	trit1	90	61.625	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027408	Trit1	91	61.717	ENSLBEG00000024262	trit1	87	62.590	Labrus_bergylta
MGP_SPRETEiJ_G0027408	Trit1	90	67.290	ENSLACG00000013861	TRIT1	88	67.290	Latimeria_chalumnae
MGP_SPRETEiJ_G0027408	Trit1	97	59.957	ENSLOCG00000002057	trit1	91	61.731	Lepisosteus_oculatus
MGP_SPRETEiJ_G0027408	Trit1	100	86.938	ENSLAFG00000016876	TRIT1	98	87.118	Loxodonta_africana
MGP_SPRETEiJ_G0027408	Trit1	100	88.009	ENSMFAG00000001316	TRIT1	100	88.009	Macaca_fascicularis
MGP_SPRETEiJ_G0027408	Trit1	100	88.009	ENSMMUG00000016220	TRIT1	100	88.009	Macaca_mulatta
MGP_SPRETEiJ_G0027408	Trit1	100	88.009	ENSMNEG00000023137	TRIT1	100	88.009	Macaca_nemestrina
MGP_SPRETEiJ_G0027408	Trit1	99	87.983	ENSMLEG00000035296	TRIT1	99	87.983	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027408	Trit1	91	60.970	ENSMAMG00000005868	trit1	89	61.557	Mastacembelus_armatus
MGP_SPRETEiJ_G0027408	Trit1	99	57.500	ENSMZEG00005011506	trit1	98	58.209	Maylandia_zebra
MGP_SPRETEiJ_G0027408	Trit1	79	75.000	ENSMGAG00000005516	TRIT1	99	75.000	Meleagris_gallopavo
MGP_SPRETEiJ_G0027408	Trit1	100	92.077	ENSMAUG00000000399	Trit1	100	92.077	Mesocricetus_auratus
MGP_SPRETEiJ_G0027408	Trit1	97	88.300	ENSMICG00000016294	TRIT1	100	88.009	Microcebus_murinus
MGP_SPRETEiJ_G0027408	Trit1	100	91.649	ENSMOCG00000008173	Trit1	100	91.649	Microtus_ochrogaster
MGP_SPRETEiJ_G0027408	Trit1	88	59.330	ENSMMOG00000021140	trit1	94	59.330	Mola_mola
MGP_SPRETEiJ_G0027408	Trit1	93	77.727	ENSMODG00000017650	TRIT1	96	77.727	Monodelphis_domestica
MGP_SPRETEiJ_G0027408	Trit1	91	60.046	ENSMALG00000017843	trit1	88	61.005	Monopterus_albus
MGP_SPRETEiJ_G0027408	Trit1	100	99.358	MGP_CAROLIEiJ_G0026428	Trit1	100	99.358	Mus_caroli
MGP_SPRETEiJ_G0027408	Trit1	100	99.358	ENSMUSG00000028653	Trit1	100	99.358	Mus_musculus
MGP_SPRETEiJ_G0027408	Trit1	100	97.645	MGP_PahariEiJ_G0028758	Trit1	100	97.645	Mus_pahari
MGP_SPRETEiJ_G0027408	Trit1	100	88.675	ENSMPUG00000014291	TRIT1	100	88.675	Mustela_putorius_furo
MGP_SPRETEiJ_G0027408	Trit1	98	86.245	ENSMLUG00000000334	TRIT1	98	86.245	Myotis_lucifugus
MGP_SPRETEiJ_G0027408	Trit1	100	89.079	ENSNLEG00000012038	TRIT1	100	89.079	Nomascus_leucogenys
MGP_SPRETEiJ_G0027408	Trit1	95	69.369	ENSMEUG00000005217	TRIT1	95	69.369	Notamacropus_eugenii
MGP_SPRETEiJ_G0027408	Trit1	73	71.505	ENSOPRG00000003205	-	73	71.505	Ochotona_princeps
MGP_SPRETEiJ_G0027408	Trit1	100	83.227	ENSODEG00000006117	TRIT1	100	83.227	Octodon_degus
MGP_SPRETEiJ_G0027408	Trit1	96	59.653	ENSONIG00000015407	trit1	93	60.444	Oreochromis_niloticus
MGP_SPRETEiJ_G0027408	Trit1	79	76.882	ENSOANG00000002779	TRIT1	100	74.046	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027408	Trit1	97	88.767	ENSOCUG00000002054	TRIT1	100	88.651	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027408	Trit1	93	62.273	ENSORLG00000005802	trit1	95	62.273	Oryzias_latipes
MGP_SPRETEiJ_G0027408	Trit1	94	60.088	ENSORLG00020005519	trit1	99	60.088	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027408	Trit1	93	61.276	ENSORLG00015018715	trit1	99	59.649	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027408	Trit1	95	61.659	ENSOMEG00000006569	trit1	95	61.959	Oryzias_melastigma
MGP_SPRETEiJ_G0027408	Trit1	97	86.564	ENSOGAG00000009571	TRIT1	100	86.325	Otolemur_garnettii
MGP_SPRETEiJ_G0027408	Trit1	98	86.710	ENSOARG00000020140	TRIT1	98	86.710	Ovis_aries
MGP_SPRETEiJ_G0027408	Trit1	100	89.079	ENSPPAG00000023930	TRIT1	100	89.079	Pan_paniscus
MGP_SPRETEiJ_G0027408	Trit1	97	88.987	ENSPPRG00000009680	TRIT1	100	88.651	Panthera_pardus
MGP_SPRETEiJ_G0027408	Trit1	97	88.987	ENSPTIG00000021134	TRIT1	100	88.651	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027408	Trit1	100	89.079	ENSPTRG00000000579	TRIT1	100	89.079	Pan_troglodytes
MGP_SPRETEiJ_G0027408	Trit1	100	87.794	ENSPANG00000018125	TRIT1	100	87.794	Papio_anubis
MGP_SPRETEiJ_G0027408	Trit1	79	59.677	ENSPKIG00000024527	trit1	95	59.569	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027408	Trit1	77	57.618	ENSPSIG00000017073	TRIT1	99	57.618	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027408	Trit1	87	60.099	ENSPMGG00000018445	trit1	98	60.099	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027408	Trit1	100	92.719	ENSPEMG00000022418	Trit1	100	92.719	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027408	Trit1	83	58.897	ENSPMAG00000008892	trit1	100	58.897	Petromyzon_marinus
MGP_SPRETEiJ_G0027408	Trit1	92	79.587	ENSPCIG00000020666	TRIT1	94	82.622	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027408	Trit1	96	59.031	ENSPFOG00000014626	trit1	96	59.031	Poecilia_formosa
MGP_SPRETEiJ_G0027408	Trit1	70	63.830	ENSPLAG00000011669	trit1	94	64.062	Poecilia_latipinna
MGP_SPRETEiJ_G0027408	Trit1	56	62.879	ENSPMEG00000023788	trit1	96	62.879	Poecilia_mexicana
MGP_SPRETEiJ_G0027408	Trit1	70	64.242	ENSPREG00000018182	trit1	90	65.409	Poecilia_reticulata
MGP_SPRETEiJ_G0027408	Trit1	100	88.223	ENSPPYG00000001499	TRIT1	100	88.223	Pongo_abelii
MGP_SPRETEiJ_G0027408	Trit1	78	72.928	ENSPCAG00000014680	TRIT1	100	72.928	Procavia_capensis
MGP_SPRETEiJ_G0027408	Trit1	97	88.079	ENSPCOG00000014150	TRIT1	99	87.931	Propithecus_coquereli
MGP_SPRETEiJ_G0027408	Trit1	97	77.263	ENSPVAG00000003344	TRIT1	100	76.874	Pteropus_vampyrus
MGP_SPRETEiJ_G0027408	Trit1	65	62.701	ENSPNYG00000001003	trit1	96	64.214	Pundamilia_nyererei
MGP_SPRETEiJ_G0027408	Trit1	88	61.557	ENSPNAG00000009466	trit1	88	64.841	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027408	Trit1	100	90.229	ENSRNOG00000014274	Trit1	100	90.229	Rattus_norvegicus
MGP_SPRETEiJ_G0027408	Trit1	100	87.152	ENSRBIG00000043179	TRIT1	100	87.152	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027408	Trit1	100	87.152	ENSRROG00000042670	TRIT1	100	87.152	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027408	Trit1	87	34.204	YOR274W	-	93	34.204	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0027408	Trit1	100	86.724	ENSSBOG00000024417	TRIT1	100	86.724	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027408	Trit1	88	75.540	ENSSHAG00000018363	TRIT1	99	75.540	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027408	Trit1	88	61.463	ENSSFOG00015007284	trit1	81	61.463	Scleropages_formosus
MGP_SPRETEiJ_G0027408	Trit1	99	59.267	ENSSMAG00000020730	trit1	91	60.674	Scophthalmus_maximus
MGP_SPRETEiJ_G0027408	Trit1	91	60.970	ENSSDUG00000001683	trit1	87	62.053	Seriola_dumerili
MGP_SPRETEiJ_G0027408	Trit1	88	60.911	ENSSLDG00000008379	trit1	90	60.648	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027408	Trit1	97	83.117	ENSSARG00000004540	TRIT1	100	82.947	Sorex_araneus
MGP_SPRETEiJ_G0027408	Trit1	88	69.100	ENSSPUG00000003472	TRIT1	84	69.100	Sphenodon_punctatus
MGP_SPRETEiJ_G0027408	Trit1	87	63.592	ENSSPAG00000020745	trit1	89	64.589	Stegastes_partitus
MGP_SPRETEiJ_G0027408	Trit1	80	71.543	ENSTGUG00000001242	TRIT1	100	71.088	Taeniopygia_guttata
MGP_SPRETEiJ_G0027408	Trit1	88	62.651	ENSTRUG00000013936	trit1	95	60.970	Takifugu_rubripes
MGP_SPRETEiJ_G0027408	Trit1	90	61.321	ENSTNIG00000009240	trit1	95	59.375	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027408	Trit1	80	93.478	ENSTBEG00000001317	TRIT1	81	89.623	Tupaia_belangeri
MGP_SPRETEiJ_G0027408	Trit1	97	87.859	ENSTTRG00000005064	TRIT1	100	87.152	Tursiops_truncatus
MGP_SPRETEiJ_G0027408	Trit1	55	86.822	ENSUAMG00000000522	-	99	86.347	Ursus_americanus
MGP_SPRETEiJ_G0027408	Trit1	97	87.665	ENSUMAG00000017299	TRIT1	90	87.366	Ursus_maritimus
MGP_SPRETEiJ_G0027408	Trit1	98	82.533	ENSVPAG00000003008	TRIT1	98	82.533	Vicugna_pacos
MGP_SPRETEiJ_G0027408	Trit1	89	66.430	ENSXETG00000010952	trit1	92	66.430	Xenopus_tropicalis
MGP_SPRETEiJ_G0027408	Trit1	71	63.554	ENSXMAG00000016302	trit1	88	65.094	Xiphophorus_maculatus