EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0027529 (Gene tree)
Gene ID
-
Gene Symbol
Pum1
Alias
Pumm
Full Name
pumilio RNA-binding family member 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
126035 bases
Position
chr4:126996270-127122304
Accession
1931749
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7018
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7028
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7038
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7048
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7058
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7068
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7078
MGP_SPRETEiJ_P0067271PUFPF00806.193.2e-7088
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6918
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6928
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6938
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6948
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6958
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6968
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6978
MGP_SPRETEiJ_P0067274PUFPF00806.192.4e-6988
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6918
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6928
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6938
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6948
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6958
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6968
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6978
MGP_SPRETEiJ_P0067270PUFPF00806.192.8e-6988
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6918
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6928
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6938
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6948
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6958
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6968
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6978
MGP_SPRETEiJ_P0067275PUFPF00806.195.9e-6988
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6918
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6928
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6938
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6948
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6958
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6968
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6978
MGP_SPRETEiJ_P0067269PUFPF00806.196e-6988
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0067275-3988-MGP_SPRETEiJ_P00672751188 (aa)--
MGP_SPRETEiJ_T0067274-4016-MGP_SPRETEiJ_P00672741186 (aa)--
MGP_SPRETEiJ_T0067271-4612-MGP_SPRETEiJ_P0067271944 (aa)--
MGP_SPRETEiJ_T0067270-5056-MGP_SPRETEiJ_P00672701092 (aa)--
MGP_SPRETEiJ_T0067273-693-MGP_SPRETEiJ_P0067273218 (aa)-UPI00015F3BCD
MGP_SPRETEiJ_T0067272-1283--- (aa)--
MGP_SPRETEiJ_T0067269-5387-MGP_SPRETEiJ_P00672691189 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0027529's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027529's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0027529Pum18687.294MGP_SPRETEiJ_G0018447Pum210088.835
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0027529Pum110099.306ENSG00000134644PUM1100100.000Homo_sapiens
MGP_SPRETEiJ_G0027529Pum19091.768ENSAPOG00000021632pum110091.283Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027529Pum110099.306ENSAMEG00000017656PUM19798.655Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027529Pum110080.817ENSACIG00000021013pum110075.993Amphilophus_citrinellus
MGP_SPRETEiJ_G0027529Pum19091.768ENSAOCG00000003944pum110091.283Amphiprion_ocellaris
MGP_SPRETEiJ_G0027529Pum19091.768ENSAPEG00000014550pum110091.283Amphiprion_percula
MGP_SPRETEiJ_G0027529Pum19091.768ENSATEG00000016004pum110091.283Anabas_testudineus
MGP_SPRETEiJ_G0027529Pum110097.015ENSAPLG00000009351PUM110096.888Anas_platyrhynchos
MGP_SPRETEiJ_G0027529Pum110095.268ENSACAG00000000682PUM19895.034Anolis_carolinensis
MGP_SPRETEiJ_G0027529Pum110099.306ENSANAG00000027865PUM110099.306Aotus_nancymaae
MGP_SPRETEiJ_G0027529Pum19076.367ENSACLG00000019354pum110078.353Astatotilapia_calliptera
MGP_SPRETEiJ_G0027529Pum110083.747ENSAMXG00000020607pum19678.344Astyanax_mexicanus
MGP_SPRETEiJ_G0027529Pum110099.306ENSBTAG00000018979PUM110099.306Bos_taurus
MGP_SPRETEiJ_G0027529Pum110099.306ENSCJAG00000006035PUM110099.515Callithrix_jacchus
MGP_SPRETEiJ_G0027529Pum110099.306ENSCAFG00000011205PUM110096.468Canis_familiaris
MGP_SPRETEiJ_G0027529Pum19296.633ENSCAFG00020024616PUM19899.272Canis_lupus_dingo
MGP_SPRETEiJ_G0027529Pum110099.306ENSCHIG00000012952PUM110099.272Capra_hircus
MGP_SPRETEiJ_G0027529Pum110098.611ENSTSYG00000008868PUM110098.611Carlito_syrichta
MGP_SPRETEiJ_G0027529Pum110098.907ENSCPOG00000031613PUM110098.907Cavia_porcellus
MGP_SPRETEiJ_G0027529Pum110099.306ENSCATG00000017991PUM110099.517Cercocebus_atys
MGP_SPRETEiJ_G0027529Pum110098.991ENSCLAG00000007662PUM1100100.000Chinchilla_lanigera
MGP_SPRETEiJ_G0027529Pum110099.306ENSCSAG00000001028PUM110098.000Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027529Pum19299.306ENSCHOG00000010245PUM19395.971Choloepus_hoffmanni
MGP_SPRETEiJ_G0027529Pum110096.928ENSCPBG00000009288PUM110098.058Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027529Pum110099.306ENSCANG00000042606PUM110099.515Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027529Pum1100100.000ENSCGRG00001024949Pum1100100.000Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027529Pum1100100.000ENSCGRG00000014197Pum1100100.000Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027529Pum19075.788ENSCSEG00000015981pum110077.108Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027529Pum110080.322ENSCVAG00000007043pum110075.207Cyprinodon_variegatus
MGP_SPRETEiJ_G0027529Pum110084.367ENSDARG00000099256pum110078.846Danio_rerio
MGP_SPRETEiJ_G0027529Pum110099.306ENSDNOG00000010939PUM110098.318Dasypus_novemcinctus
MGP_SPRETEiJ_G0027529Pum190100.000ENSDORG00000001875Pum1100100.000Dipodomys_ordii
MGP_SPRETEiJ_G0027529Pum185100.000ENSETEG00000004355PUM18792.969Echinops_telfairi
MGP_SPRETEiJ_G0027529Pum110099.306ENSEASG00005010813PUM110098.485Equus_asinus_asinus
MGP_SPRETEiJ_G0027529Pum110098.611ENSECAG00000021369PUM110098.402Equus_caballus
MGP_SPRETEiJ_G0027529Pum18099.306ENSEEUG00000003871PUM17499.661Erinaceus_europaeus
MGP_SPRETEiJ_G0027529Pum110083.109ENSELUG00000002409pum110083.127Esox_lucius
MGP_SPRETEiJ_G0027529Pum110099.306ENSFCAG00000010374PUM110099.583Felis_catus
MGP_SPRETEiJ_G0027529Pum110095.921ENSFALG00000001214PUM19794.724Ficedula_albicollis
MGP_SPRETEiJ_G0027529Pum110098.738ENSFDAG00000011319PUM110098.738Fukomys_damarensis
MGP_SPRETEiJ_G0027529Pum17087.643ENSGMOG00000010491pum110074.175Gadus_morhua
MGP_SPRETEiJ_G0027529Pum110097.139ENSGALG00000042598PUM110097.056Gallus_gallus
MGP_SPRETEiJ_G0027529Pum110080.446ENSGAFG00000015617pum110090.557Gambusia_affinis
MGP_SPRETEiJ_G0027529Pum110080.542ENSGACG00000005717pum110075.783Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027529Pum110096.642ENSGAGG00000001290PUM110096.636Gopherus_agassizii
MGP_SPRETEiJ_G0027529Pum110099.306ENSGGOG00000011983PUM110099.515Gorilla_gorilla
MGP_SPRETEiJ_G0027529Pum110080.569ENSHBUG00000018718pum110075.785Haplochromis_burtoni
MGP_SPRETEiJ_G0027529Pum110098.570ENSHGLG00000013819Pum110098.570Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027529Pum110098.570ENSHGLG00100008621Pum110098.570Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027529Pum19074.630ENSHCOG00000005149pum110074.468Hippocampus_comes
MGP_SPRETEiJ_G0027529Pum110082.143ENSIPUG00000020421pum110077.307Ictalurus_punctatus
MGP_SPRETEiJ_G0027529Pum110099.306ENSSTOG00000010757PUM110099.306Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027529Pum110099.306ENSJJAG00000000530Pum110099.306Jaculus_jaculus
MGP_SPRETEiJ_G0027529Pum110079.950ENSKMAG00000003481pum110075.372Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027529Pum110079.926ENSLBEG00000002527pum110075.394Labrus_bergylta
MGP_SPRETEiJ_G0027529Pum110088.104ENSLACG00000017188PUM19986.261Latimeria_chalumnae
MGP_SPRETEiJ_G0027529Pum110090.932ENSLOCG00000005210pum19987.813Lepisosteus_oculatus
MGP_SPRETEiJ_G0027529Pum110098.066ENSLAFG00000003178PUM110098.066Loxodonta_africana
MGP_SPRETEiJ_G0027529Pum110099.306ENSMFAG00000010291PUM110099.517Macaca_fascicularis
MGP_SPRETEiJ_G0027529Pum110099.306ENSMMUG00000013520PUM110099.515Macaca_mulatta
MGP_SPRETEiJ_G0027529Pum110099.306ENSMNEG00000034639PUM110099.515Macaca_nemestrina
MGP_SPRETEiJ_G0027529Pum110099.306ENSMLEG00000038743PUM110099.515Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027529Pum110080.569ENSMAMG00000011606pum110075.868Mastacembelus_armatus
MGP_SPRETEiJ_G0027529Pum110080.569ENSMZEG00005005834pum110075.785Maylandia_zebra
MGP_SPRETEiJ_G0027529Pum110096.804ENSMGAG00000000724PUM110096.804Meleagris_gallopavo
MGP_SPRETEiJ_G0027529Pum1100100.000ENSMAUG00000022090Pum1100100.000Mesocricetus_auratus
MGP_SPRETEiJ_G0027529Pum110098.738ENSMICG00000007713-10099.272Microcebus_murinus
MGP_SPRETEiJ_G0027529Pum19997.183ENSMICG00000012213-10095.874Microcebus_murinus
MGP_SPRETEiJ_G0027529Pum110099.306ENSMOCG00000015463Pum110099.306Microtus_ochrogaster
MGP_SPRETEiJ_G0027529Pum19088.453ENSMMOG00000019817pum110091.041Mola_mola
MGP_SPRETEiJ_G0027529Pum110097.059ENSMODG00000017067PUM110097.059Monodelphis_domestica
MGP_SPRETEiJ_G0027529Pum19088.684ENSMALG00000016399pum110091.283Monopterus_albus
MGP_SPRETEiJ_G0027529Pum110099.748MGP_CAROLIEiJ_G0026549Pum110099.748Mus_caroli
MGP_SPRETEiJ_G0027529Pum1100100.000ENSMUSG00000028580Pum1100100.000Mus_musculus
MGP_SPRETEiJ_G0027529Pum1100100.000MGP_PahariEiJ_G0028881Pum1100100.000Mus_pahari
MGP_SPRETEiJ_G0027529Pum110099.306ENSMPUG00000015454PUM110098.401Mustela_putorius_furo
MGP_SPRETEiJ_G0027529Pum110099.306ENSMLUG00000006490PUM110098.399Myotis_lucifugus
MGP_SPRETEiJ_G0027529Pum110098.941ENSNGAG00000002378Pum110099.001Nannospalax_galili
MGP_SPRETEiJ_G0027529Pum110077.929ENSNBRG00000010689pum110082.673Neolamprologus_brichardi
MGP_SPRETEiJ_G0027529Pum110098.611ENSNLEG00000001151PUM110098.611Nomascus_leucogenys
MGP_SPRETEiJ_G0027529Pum18496.622ENSMEUG00000000976-8296.622Notamacropus_eugenii
MGP_SPRETEiJ_G0027529Pum184100.000ENSOPRG00000001776PUM173100.000Ochotona_princeps
MGP_SPRETEiJ_G0027529Pum110098.822ENSODEG00000003465PUM110098.822Octodon_degus
MGP_SPRETEiJ_G0027529Pum110081.127ENSONIG00000002290pum110076.116Oreochromis_niloticus
MGP_SPRETEiJ_G0027529Pum18177.254ENSOANG00000004902-10077.254Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027529Pum110099.306ENSOCUG00000008641PUM19998.484Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027529Pum110081.312ENSORLG00000011482pum110075.535Oryzias_latipes
MGP_SPRETEiJ_G0027529Pum110081.436ENSORLG00020019461pum110075.535Oryzias_latipes_hni
MGP_SPRETEiJ_G0027529Pum110081.436ENSORLG00015011375pum110075.618Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027529Pum19092.978ENSOMEG00000009312pum110090.557Oryzias_melastigma
MGP_SPRETEiJ_G0027529Pum110098.611ENSOGAG00000011063PUM110095.886Otolemur_garnettii
MGP_SPRETEiJ_G0027529Pum110099.306ENSOARG00000001899PUM110099.272Ovis_aries
MGP_SPRETEiJ_G0027529Pum110099.306ENSPPAG00000044003PUM110099.515Pan_paniscus
MGP_SPRETEiJ_G0027529Pum110099.306ENSPPRG00000001370PUM110099.306Panthera_pardus
MGP_SPRETEiJ_G0027529Pum110099.306ENSPTIG00000010798PUM110099.306Panthera_tigris_altaica
MGP_SPRETEiJ_G0027529Pum110099.306ENSPTRG00000000453PUM110099.515Pan_troglodytes
MGP_SPRETEiJ_G0027529Pum110099.306ENSPANG00000016338PUM110099.517Papio_anubis
MGP_SPRETEiJ_G0027529Pum110082.130ENSPKIG00000010578pum110077.805Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027529Pum110097.138ENSPSIG00000014118PUM110097.138Pelodiscus_sinensis
MGP_SPRETEiJ_G0027529Pum110076.403ENSPMGG00000005836pum110081.127Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027529Pum1100100.000ENSPEMG00000010009Pum1100100.000Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027529Pum110097.059ENSPCIG00000014151PUM110097.585Phascolarctos_cinereus
MGP_SPRETEiJ_G0027529Pum19383.128ENSPFOG00000007289pum19981.498Poecilia_formosa
MGP_SPRETEiJ_G0027529Pum110082.222ENSPLAG00000007256pum110077.433Poecilia_latipinna
MGP_SPRETEiJ_G0027529Pum18582.346ENSPMEG00000019543pum19977.737Poecilia_mexicana
MGP_SPRETEiJ_G0027529Pum110080.322ENSPREG00000005195pum110080.194Poecilia_reticulata
MGP_SPRETEiJ_G0027529Pum110099.306ENSPPYG00000001621PUM110096.947Pongo_abelii
MGP_SPRETEiJ_G0027529Pum18498.765ENSPCAG00000001979PUM17498.765Procavia_capensis
MGP_SPRETEiJ_G0027529Pum110098.738ENSPCOG00000004398PUM110099.272Propithecus_coquereli
MGP_SPRETEiJ_G0027529Pum110099.306ENSPVAG00000005207PUM19796.549Pteropus_vampyrus
MGP_SPRETEiJ_G0027529Pum110080.569ENSPNYG00000009518pum110081.840Pundamilia_nyererei
MGP_SPRETEiJ_G0027529Pum110083.995ENSPNAG00000026728pum110079.645Pygocentrus_nattereri
MGP_SPRETEiJ_G0027529Pum1100100.000ENSRNOG00000011709Pum110099.663Rattus_norvegicus
MGP_SPRETEiJ_G0027529Pum110099.306ENSRBIG00000042521PUM110099.517Rhinopithecus_bieti
MGP_SPRETEiJ_G0027529Pum110099.306ENSRROG00000020156PUM110099.515Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027529Pum110099.306ENSSBOG00000032037PUM110099.515Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027529Pum110096.891ENSSHAG00000010918PUM110096.891Sarcophilus_harrisii
MGP_SPRETEiJ_G0027529Pum110080.569ENSSMAG00000010918pum110091.283Scophthalmus_maximus
MGP_SPRETEiJ_G0027529Pum110080.569ENSSDUG00000009021pum110076.116Seriola_dumerili
MGP_SPRETEiJ_G0027529Pum110080.569ENSSLDG00000009667pum110078.031Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027529Pum19999.306ENSSARG00000003055PUM19199.558Sorex_araneus
MGP_SPRETEiJ_G0027529Pum110096.887ENSSPUG00000006267PUM110096.380Sphenodon_punctatus
MGP_SPRETEiJ_G0027529Pum19091.768ENSSPAG00000016636pum110091.283Stegastes_partitus
MGP_SPRETEiJ_G0027529Pum110099.306ENSSSCG00000003591PUM110099.583Sus_scrofa
MGP_SPRETEiJ_G0027529Pum110080.569ENSTRUG00000013121pum110082.302Takifugu_rubripes
MGP_SPRETEiJ_G0027529Pum110080.346ENSTNIG00000016983pum19976.100Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027529Pum18796.341ENSTBEG00000013810PUM18996.341Tupaia_belangeri
MGP_SPRETEiJ_G0027529Pum19298.631ENSTTRG00000007436PUM19098.631Tursiops_truncatus
MGP_SPRETEiJ_G0027529Pum19998.429ENSUAMG00000018262-10098.429Ursus_americanus
MGP_SPRETEiJ_G0027529Pum19599.275ENSUMAG00000009211PUM110099.275Ursus_maritimus
MGP_SPRETEiJ_G0027529Pum110098.611ENSVPAG00000005902PUM19299.322Vicugna_pacos
MGP_SPRETEiJ_G0027529Pum110099.306ENSVVUG00000014631PUM110099.275Vulpes_vulpes
MGP_SPRETEiJ_G0027529Pum110087.950ENSXETG00000012904pum19986.902Xenopus_tropicalis
MGP_SPRETEiJ_G0027529Pum110080.446ENSXMAG00000002945pum110077.306Xiphophorus_maculatus

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