EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027535 (Gene tree)
Gene ID: -
Gene Symbol: Srsf4
Alias: 5730499P16Rik|MNCb-2616|SRp75|Sfrs4
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 27284 bases
Position: chr4:128295986-128323269
Accession: 1890577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0067312	RRM_1	PF00076.22	4.3e-31	1	2
MGP_SPRETEiJ_P0067312	RRM_1	PF00076.22	4.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0067312	-	2264	-	MGP_SPRETEiJ_P0067312	493 (aa)	-	-
MGP_SPRETEiJ_T0067313	-	852	-	MGP_SPRETEiJ_P0067313	55 (aa)	-	-
MGP_SPRETEiJ_T0067316	-	2452	-	MGP_SPRETEiJ_P0067316	493 (aa)	-	-
MGP_SPRETEiJ_T0067314	-	981	-	MGP_SPRETEiJ_P0067314	31 (aa)	-	UPI00053BD782
MGP_SPRETEiJ_T0067315	-	3108	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027535	Srsf4	92	83.114	ENSG00000116350	SRSF4	93	82.468	Homo_sapiens
MGP_SPRETEiJ_G0027535	Srsf4	92	83.801	ENSAMEG00000000594	SRSF4	93	81.250	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027535	Srsf4	85	70.743	ENSAPLG00000006595	-	92	70.476	Anas_platyrhynchos
MGP_SPRETEiJ_G0027535	Srsf4	87	82.176	ENSANAG00000037134	SRSF4	100	83.716	Aotus_nancymaae
MGP_SPRETEiJ_G0027535	Srsf4	92	82.684	ENSBTAG00000013309	SRSF4	92	81.681	Bos_taurus
MGP_SPRETEiJ_G0027535	Srsf4	92	83.333	ENSCJAG00000047192	SRSF4	93	85.345	Callithrix_jacchus
MGP_SPRETEiJ_G0027535	Srsf4	89	79.287	ENSCAFG00000011669	SRSF4	90	82.870	Canis_familiaris
MGP_SPRETEiJ_G0027535	Srsf4	92	80.652	ENSCAFG00020023963	SRSF4	92	80.911	Canis_lupus_dingo
MGP_SPRETEiJ_G0027535	Srsf4	92	79.184	ENSCHIG00000022096	SRSF4	85	100.000	Capra_hircus
MGP_SPRETEiJ_G0027535	Srsf4	92	84.483	ENSTSYG00000007903	SRSF4	93	83.190	Carlito_syrichta
MGP_SPRETEiJ_G0027535	Srsf4	67	77.581	ENSCCAG00000033585	SRSF4	90	80.352	Cebus_capucinus
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSCATG00000031440	SRSF4	93	82.900	Cercocebus_atys
MGP_SPRETEiJ_G0027535	Srsf4	92	82.684	ENSCLAG00000009008	SRSF4	93	82.900	Chinchilla_lanigera
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSCSAG00000001022	SRSF4	93	82.900	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027535	Srsf4	85	79.009	ENSCHOG00000013858	SRSF4	93	77.336	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027535	Srsf4	67	88.554	ENSCPBG00000009020	SRSF4	93	77.253	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSCANG00000028667	SRSF4	93	82.900	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027535	Srsf4	92	91.886	ENSCGRG00001021115	Srsf4	92	91.703	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027535	Srsf4	85	90.758	ENSCGRG00000014137	Srsf4	92	90.995	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027535	Srsf4	92	80.255	ENSDNOG00000047961	SRSF4	93	84.746	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027535	Srsf4	82	100.000	ENSETEG00000009774	SRSF4	93	70.259	Echinops_telfairi
MGP_SPRETEiJ_G0027535	Srsf4	92	84.416	ENSEASG00005010168	SRSF4	93	86.422	Equus_asinus_asinus
MGP_SPRETEiJ_G0027535	Srsf4	92	84.416	ENSECAG00000021350	SRSF4	93	86.422	Equus_caballus
MGP_SPRETEiJ_G0027535	Srsf4	92	82.314	ENSEEUG00000008479	SRSF4	92	82.391	Erinaceus_europaeus
MGP_SPRETEiJ_G0027535	Srsf4	53	56.146	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
MGP_SPRETEiJ_G0027535	Srsf4	92	81.360	ENSFCAG00000027821	SRSF4	92	81.957	Felis_catus
MGP_SPRETEiJ_G0027535	Srsf4	92	68.870	ENSFALG00000001346	SRSF4	92	71.053	Ficedula_albicollis
MGP_SPRETEiJ_G0027535	Srsf4	60	83.667	ENSFDAG00000007332	SRSF4	92	78.220	Fukomys_damarensis
MGP_SPRETEiJ_G0027535	Srsf4	52	68.110	ENSFHEG00000007472	srsf4	90	86.905	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027535	Srsf4	92	72.848	ENSGALG00000050314	SRSF4	92	70.833	Gallus_gallus
MGP_SPRETEiJ_G0027535	Srsf4	51	61.328	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
MGP_SPRETEiJ_G0027535	Srsf4	67	87.576	ENSGAGG00000014836	SRSF4	93	76.923	Gopherus_agassizii
MGP_SPRETEiJ_G0027535	Srsf4	92	83.333	ENSGGOG00000002444	SRSF4	93	82.684	Gorilla_gorilla
MGP_SPRETEiJ_G0027535	Srsf4	95	79.237	ENSHGLG00000011842	SRSF4	92	78.478	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027535	Srsf4	95	79.237	ENSHGLG00100017279	SRSF4	92	78.478	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027535	Srsf4	92	85.870	ENSSTOG00000015908	SRSF4	93	83.696	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027535	Srsf4	92	72.391	ENSJJAG00000022153	Srsf4	93	73.707	Jaculus_jaculus
MGP_SPRETEiJ_G0027535	Srsf4	89	81.292	ENSLAFG00000002575	SRSF4	89	83.480	Loxodonta_africana
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSMFAG00000041784	SRSF4	93	82.900	Macaca_fascicularis
MGP_SPRETEiJ_G0027535	Srsf4	85	82.185	ENSMMUG00000007110	SRSF4	87	81.499	Macaca_mulatta
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSMNEG00000034931	SRSF4	93	82.900	Macaca_nemestrina
MGP_SPRETEiJ_G0027535	Srsf4	92	83.772	ENSMLEG00000031619	SRSF4	93	83.117	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027535	Srsf4	92	70.989	ENSMGAG00000002400	SRSF4	92	70.833	Meleagris_gallopavo
MGP_SPRETEiJ_G0027535	Srsf4	92	93.640	ENSMAUG00000021940	Srsf4	92	92.325	Mesocricetus_auratus
MGP_SPRETEiJ_G0027535	Srsf4	92	85.217	ENSMICG00000043567	SRSF4	93	87.229	Microcebus_murinus
MGP_SPRETEiJ_G0027535	Srsf4	92	92.140	ENSMOCG00000013319	Srsf4	92	92.358	Microtus_ochrogaster
MGP_SPRETEiJ_G0027535	Srsf4	53	65.530	ENSMMOG00000013653	srsf4	99	85.507	Mola_mola
MGP_SPRETEiJ_G0027535	Srsf4	61	93.355	ENSMODG00000011052	SRSF4	93	93.355	Monodelphis_domestica
MGP_SPRETEiJ_G0027535	Srsf4	100	99.391	MGP_CAROLIEiJ_G0026555	Srsf4	100	99.391	Mus_caroli
MGP_SPRETEiJ_G0027535	Srsf4	100	99.391	ENSMUSG00000028911	Srsf4	100	99.391	Mus_musculus
MGP_SPRETEiJ_G0027535	Srsf4	92	93.421	MGP_PahariEiJ_G0028887	Srsf4	92	93.913	Mus_pahari
MGP_SPRETEiJ_G0027535	Srsf4	92	80.819	ENSMPUG00000015470	SRSF4	93	82.796	Mustela_putorius_furo
MGP_SPRETEiJ_G0027535	Srsf4	67	90.578	ENSMLUG00000014770	SRSF4	92	79.741	Myotis_lucifugus
MGP_SPRETEiJ_G0027535	Srsf4	92	84.211	ENSNGAG00000012225	Srsf4	93	84.783	Nannospalax_galili
MGP_SPRETEiJ_G0027535	Srsf4	92	83.772	ENSNLEG00000009916	SRSF4	93	83.333	Nomascus_leucogenys
MGP_SPRETEiJ_G0027535	Srsf4	61	100.000	ENSMEUG00000003045	-	69	100.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0027535	Srsf4	92	78.166	ENSOPRG00000010098	SRSF4	93	77.948	Ochotona_princeps
MGP_SPRETEiJ_G0027535	Srsf4	68	86.866	ENSODEG00000003230	SRSF4	93	81.116	Octodon_degus
MGP_SPRETEiJ_G0027535	Srsf4	92	81.034	ENSOCUG00000001837	SRSF4	93	81.897	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027535	Srsf4	92	83.991	ENSOGAG00000015515	SRSF4	92	81.957	Otolemur_garnettii
MGP_SPRETEiJ_G0027535	Srsf4	92	83.333	ENSPPAG00000028357	SRSF4	93	82.684	Pan_paniscus
MGP_SPRETEiJ_G0027535	Srsf4	92	81.360	ENSPPRG00000016248	SRSF4	92	81.957	Panthera_pardus
MGP_SPRETEiJ_G0027535	Srsf4	92	83.333	ENSPTRG00000000445	SRSF4	93	82.684	Pan_troglodytes
MGP_SPRETEiJ_G0027535	Srsf4	92	83.772	ENSPANG00000021937	SRSF4	93	83.117	Papio_anubis
MGP_SPRETEiJ_G0027535	Srsf4	88	89.401	ENSPEMG00000003365	Srsf4	92	91.943	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027535	Srsf4	92	83.772	ENSPPYG00000001629	SRSF4	93	83.117	Pongo_abelii
MGP_SPRETEiJ_G0027535	Srsf4	92	79.266	ENSPCAG00000009879	SRSF4	93	78.571	Procavia_capensis
MGP_SPRETEiJ_G0027535	Srsf4	92	83.991	ENSPCOG00000027341	SRSF4	92	83.261	Propithecus_coquereli
MGP_SPRETEiJ_G0027535	Srsf4	52	79.856	ENSPVAG00000012500	SRSF4	78	73.554	Pteropus_vampyrus
MGP_SPRETEiJ_G0027535	Srsf4	92	92.982	ENSRNOG00000010007	Srsf4	92	93.450	Rattus_norvegicus
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSRBIG00000035789	SRSF4	93	82.900	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027535	Srsf4	92	83.553	ENSRROG00000029463	SRSF4	93	82.900	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027535	Srsf4	92	83.550	ENSSBOG00000027098	SRSF4	93	85.560	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027535	Srsf4	57	90.681	ENSSHAG00000012407	SRSF4	94	91.544	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027535	Srsf4	65	84.161	ENSSPUG00000015318	-	92	72.222	Sphenodon_punctatus
MGP_SPRETEiJ_G0027535	Srsf4	53	71.970	ENSSPAG00000014538	srsf4	88	85.507	Stegastes_partitus
MGP_SPRETEiJ_G0027535	Srsf4	96	80.042	ENSSSCG00000003589	SRSF4	94	82.135	Sus_scrofa
MGP_SPRETEiJ_G0027535	Srsf4	85	74.702	ENSTGUG00000000765	SRSF4	92	67.458	Taeniopygia_guttata
MGP_SPRETEiJ_G0027535	Srsf4	55	66.783	ENSTRUG00000011891	srsf4	62	80.829	Takifugu_rubripes
MGP_SPRETEiJ_G0027535	Srsf4	92	79.560	ENSTTRG00000002572	SRSF4	92	82.468	Tursiops_truncatus
MGP_SPRETEiJ_G0027535	Srsf4	92	85.217	ENSUAMG00000006106	SRSF4	93	85.033	Ursus_americanus
MGP_SPRETEiJ_G0027535	Srsf4	89	80.761	ENSVVUG00000012690	SRSF4	90	83.488	Vulpes_vulpes