EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027625 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 15020 bases
Position: chr4:132566322-132581341
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0067728	RRM_1	PF00076.22	1.5e-19	1	1
MGP_SPRETEiJ_P0067727	RRM_1	PF00076.22	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0067729	-	2504	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0067728	-	2236	-	MGP_SPRETEiJ_P0067728	182 (aa)	-	UPI000013F442
MGP_SPRETEiJ_T0067727	-	3812	-	MGP_SPRETEiJ_P0067727	183 (aa)	-	UPI0000027D80
MGP_SPRETEiJ_T0067734	-	431	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0067730	-	676	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0067731	-	717	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0067732	-	6128	-	MGP_SPRETEiJ_P0067732	214 (aa)	-	-
MGP_SPRETEiJ_T0067733	-	394	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0027625	-	50	32.500	MGP_SPRETEiJ_G0025903	Pabpc4l	52	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSG00000188529	SRSF10	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0027625	-	90	98.193	ENSAMEG00000009869	SRSF10	63	98.193	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027625	-	79	97.917	ENSAPLG00000005446	SRSF10	60	97.917	Anas_platyrhynchos
MGP_SPRETEiJ_G0027625	-	90	94.578	ENSACAG00000005327	SRSF10	65	94.578	Anolis_carolinensis
MGP_SPRETEiJ_G0027625	-	84	87.500	ENSANAG00000033569	-	84	93.878	Aotus_nancymaae
MGP_SPRETEiJ_G0027625	-	90	94.512	ENSANAG00000029200	-	65	94.512	Aotus_nancymaae
MGP_SPRETEiJ_G0027625	-	100	80.328	ENSANAG00000033337	-	100	80.328	Aotus_nancymaae
MGP_SPRETEiJ_G0027625	-	100	99.451	ENSBTAG00000008072	SRSF10	100	99.451	Bos_taurus
MGP_SPRETEiJ_G0027625	-	92	94.083	ENSBTAG00000054307	-	99	80.693	Bos_taurus
MGP_SPRETEiJ_G0027625	-	90	99.390	ENSCJAG00000044116	SRSF10	63	99.390	Callithrix_jacchus
MGP_SPRETEiJ_G0027625	-	90	87.805	ENSCJAG00000002933	-	89	87.805	Callithrix_jacchus
MGP_SPRETEiJ_G0027625	-	90	93.902	ENSCJAG00000010608	-	98	86.264	Callithrix_jacchus
MGP_SPRETEiJ_G0027625	-	86	94.904	ENSCAFG00000003095	-	61	94.937	Canis_familiaris
MGP_SPRETEiJ_G0027625	-	90	96.951	ENSCAFG00020020795	-	61	96.951	Canis_lupus_dingo
MGP_SPRETEiJ_G0027625	-	100	91.257	ENSCHIG00000000308	-	100	91.279	Capra_hircus
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSTSYG00000009439	-	95	100.000	Carlito_syrichta
MGP_SPRETEiJ_G0027625	-	88	100.000	ENSCAPG00000014746	SRSF10	100	100.000	Cavia_aperea
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSCPOG00000034102	SRSF10	100	100.000	Cavia_porcellus
MGP_SPRETEiJ_G0027625	-	100	80.769	ENSCCAG00000024936	-	100	80.769	Cebus_capucinus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSCCAG00000022497	SRSF10	100	100.000	Cebus_capucinus
MGP_SPRETEiJ_G0027625	-	84	81.699	ENSCCAG00000033919	-	71	85.816	Cebus_capucinus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSCATG00000031598	SRSF10	100	100.000	Cercocebus_atys
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSCLAG00000015555	SRSF10	100	100.000	Chinchilla_lanigera
MGP_SPRETEiJ_G0027625	-	80	100.000	ENSCHOG00000004836	-	100	100.000	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027625	-	89	99.387	ENSCHOG00000007773	-	100	99.387	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027625	-	90	98.193	ENSCPBG00000000469	SRSF10	63	98.193	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027625	-	78	100.000	ENSCANG00000037293	-	95	97.260	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027625	-	90	92.683	ENSCANG00000041113	-	63	92.683	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027625	-	100	89.560	ENSCANG00000037461	-	100	89.560	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027625	-	81	65.541	ENSCANG00000010607	-	57	59.333	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027625	-	89	100.000	ENSCANG00000042227	-	94	100.000	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSCGRG00001017946	Srsf10	100	100.000	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027625	-	89	100.000	ENSCGRG00000011531	Srsf10	75	100.000	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027625	-	60	83.636	ENSDARG00000086411	srsf10b	64	77.987	Danio_rerio
MGP_SPRETEiJ_G0027625	-	89	74.074	ENSDNOG00000048916	-	62	74.074	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027625	-	74	65.672	ENSDNOG00000048051	-	96	65.672	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSDORG00000024574	Srsf10	100	100.000	Dipodomys_ordii
MGP_SPRETEiJ_G0027625	-	90	98.780	ENSEASG00005004349	SRSF10	63	98.780	Equus_asinus_asinus
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSECAG00000023709	SRSF10	63	100.000	Equus_caballus
MGP_SPRETEiJ_G0027625	-	90	97.576	ENSEEUG00000014286	SRSF10	63	97.576	Erinaceus_europaeus
MGP_SPRETEiJ_G0027625	-	50	79.121	ENSELUG00000017108	SRSF10	60	79.121	Esox_lucius
MGP_SPRETEiJ_G0027625	-	100	99.454	ENSFCAG00000045556	SRSF10	100	99.454	Felis_catus
MGP_SPRETEiJ_G0027625	-	90	97.561	ENSFALG00000000505	SRSF10	63	97.561	Ficedula_albicollis
MGP_SPRETEiJ_G0027625	-	76	86.331	ENSFDAG00000005977	-	98	82.237	Fukomys_damarensis
MGP_SPRETEiJ_G0027625	-	86	66.242	ENSFDAG00000021316	-	62	66.242	Fukomys_damarensis
MGP_SPRETEiJ_G0027625	-	90	97.561	ENSFDAG00000019418	SRSF10	62	97.561	Fukomys_damarensis
MGP_SPRETEiJ_G0027625	-	90	98.780	ENSGALG00000004133	SRSF10	63	98.780	Gallus_gallus
MGP_SPRETEiJ_G0027625	-	60	84.404	ENSGAFG00000014771	srsf10b	58	79.817	Gambusia_affinis
MGP_SPRETEiJ_G0027625	-	59	78.632	ENSGACG00000013650	SRSF10	67	69.492	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027625	-	90	98.193	ENSGAGG00000005357	SRSF10	63	98.193	Gopherus_agassizii
MGP_SPRETEiJ_G0027625	-	83	71.523	ENSGGOG00000036220	-	62	61.146	Gorilla_gorilla
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSGGOG00000000392	SRSF10	100	100.000	Gorilla_gorilla
MGP_SPRETEiJ_G0027625	-	93	73.964	ENSGGOG00000042323	-	99	74.405	Gorilla_gorilla
MGP_SPRETEiJ_G0027625	-	81	82.432	ENSHGLG00000018327	-	59	74.324	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSHGLG00000010879	-	100	100.000	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027625	-	90	97.561	ENSHGLG00100008152	-	62	97.561	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027625	-	89	78.049	ENSHGLG00100011571	-	64	70.732	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSSTOG00000000956	SRSF10	100	100.000	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSJJAG00000009074	Srsf10	100	100.000	Jaculus_jaculus
MGP_SPRETEiJ_G0027625	-	90	88.415	ENSJJAG00000012744	-	67	87.805	Jaculus_jaculus
MGP_SPRETEiJ_G0027625	-	100	98.901	ENSJJAG00000014552	-	100	98.901	Jaculus_jaculus
MGP_SPRETEiJ_G0027625	-	100	73.770	ENSJJAG00000023686	-	100	68.306	Jaculus_jaculus
MGP_SPRETEiJ_G0027625	-	90	89.024	ENSJJAG00000021270	-	77	89.024	Jaculus_jaculus
MGP_SPRETEiJ_G0027625	-	90	98.795	ENSLAFG00000026905	SRSF10	63	98.795	Loxodonta_africana
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSMFAG00000046011	SRSF10	95	100.000	Macaca_fascicularis
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSMMUG00000013784	SRSF10	62	100.000	Macaca_mulatta
MGP_SPRETEiJ_G0027625	-	100	97.814	ENSMMUG00000038562	-	100	97.814	Macaca_mulatta
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSMNEG00000041500	SRSF10	100	100.000	Macaca_nemestrina
MGP_SPRETEiJ_G0027625	-	90	79.268	ENSMLEG00000033834	-	97	77.848	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSMLEG00000016013	SRSF10	95	100.000	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027625	-	61	86.486	ENSMZEG00005008188	SRSF10	74	70.811	Maylandia_zebra
MGP_SPRETEiJ_G0027625	-	79	97.917	ENSMGAG00000005772	SRSF10	60	97.917	Meleagris_gallopavo
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSMAUG00000019452	Srsf10	100	100.000	Mesocricetus_auratus
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSMICG00000047638	SRSF10	100	90.110	Microcebus_murinus
MGP_SPRETEiJ_G0027625	-	96	100.000	ENSMICG00000017029	-	99	100.000	Microcebus_murinus
MGP_SPRETEiJ_G0027625	-	70	92.126	ENSMICG00000037744	-	51	87.402	Microcebus_murinus
MGP_SPRETEiJ_G0027625	-	90	97.561	ENSMOCG00000013656	Srsf10	62	97.561	Microtus_ochrogaster
MGP_SPRETEiJ_G0027625	-	90	98.182	ENSMODG00000013020	-	80	98.182	Monodelphis_domestica
MGP_SPRETEiJ_G0027625	-	57	82.524	ENSMALG00000017201	srsf10b	55	82.524	Monopterus_albus
MGP_SPRETEiJ_G0027625	-	100	100.000	MGP_CAROLIEiJ_G0026645	Srsf10	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSMUSG00000028676	Srsf10	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0027625	-	58	100.000	MGP_PahariEiJ_G0028978	-	85	100.000	Mus_pahari
MGP_SPRETEiJ_G0027625	-	90	99.390	ENSMPUG00000015845	SRSF10	63	99.390	Mustela_putorius_furo
MGP_SPRETEiJ_G0027625	-	90	99.390	ENSMLUG00000005293	-	65	99.390	Myotis_lucifugus
MGP_SPRETEiJ_G0027625	-	90	98.795	ENSMLUG00000028520	SRSF10	63	98.795	Myotis_lucifugus
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSNGAG00000000067	Srsf10	100	100.000	Nannospalax_galili
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSNLEG00000027520	SRSF10	95	100.000	Nomascus_leucogenys
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSOPRG00000018613	SRSF10	63	100.000	Ochotona_princeps
MGP_SPRETEiJ_G0027625	-	100	82.028	ENSODEG00000019549	-	100	82.028	Octodon_degus
MGP_SPRETEiJ_G0027625	-	96	79.429	ENSODEG00000002658	-	84	77.011	Octodon_degus
MGP_SPRETEiJ_G0027625	-	90	71.779	ENSODEG00000007110	-	64	71.779	Octodon_degus
MGP_SPRETEiJ_G0027625	-	90	98.780	ENSODEG00000020016	-	63	98.780	Octodon_degus
MGP_SPRETEiJ_G0027625	-	90	96.951	ENSODEG00000018739	-	63	96.951	Octodon_degus
MGP_SPRETEiJ_G0027625	-	100	89.011	ENSOCUG00000021782	-	100	89.011	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSOCUG00000024013	-	100	90.110	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027625	-	100	75.410	ENSOCUG00000028110	-	100	75.410	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027625	-	90	96.341	ENSOARG00000000073	-	63	96.341	Ovis_aries
MGP_SPRETEiJ_G0027625	-	80	95.862	ENSOARG00000015607	-	78	95.862	Ovis_aries
MGP_SPRETEiJ_G0027625	-	78	97.931	ENSOARG00000006984	-	56	97.931	Ovis_aries
MGP_SPRETEiJ_G0027625	-	90	96.341	ENSOARG00000002384	-	59	96.341	Ovis_aries
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSPPAG00000032557	SRSF10	100	100.000	Pan_paniscus
MGP_SPRETEiJ_G0027625	-	95	80.814	ENSPPAG00000007053	-	100	80.814	Pan_paniscus
MGP_SPRETEiJ_G0027625	-	100	99.454	ENSPPRG00000005806	SRSF10	100	99.454	Panthera_pardus
MGP_SPRETEiJ_G0027625	-	90	93.373	ENSPPRG00000001945	-	62	93.373	Panthera_pardus
MGP_SPRETEiJ_G0027625	-	85	81.529	ENSPTIG00000012013	-	77	81.410	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027625	-	100	98.907	ENSPTIG00000014137	SRSF10	100	98.907	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027625	-	93	83.432	ENSPTRG00000051779	-	99	83.929	Pan_troglodytes
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSPTRG00000044753	SRSF10	100	100.000	Pan_troglodytes
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSPANG00000021680	SRSF10	100	100.000	Papio_anubis
MGP_SPRETEiJ_G0027625	-	78	99.301	ENSPSIG00000017849	SRSF10	59	99.301	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027625	-	63	79.339	ENSPREG00000008383	srsf10b	58	79.817	Poecilia_reticulata
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSPPYG00000001726	SRSF10	63	100.000	Pongo_abelii
MGP_SPRETEiJ_G0027625	-	90	78.049	ENSPCAG00000004059	SRSF10	63	78.049	Procavia_capensis
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSPCOG00000022379	SRSF10	100	100.000	Propithecus_coquereli
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSPVAG00000013611	SRSF10	63	100.000	Pteropus_vampyrus
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSRNOG00000007992	Srsf10	100	100.000	Rattus_norvegicus
MGP_SPRETEiJ_G0027625	-	90	88.415	ENSRBIG00000044085	-	97	87.975	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027625	-	100	100.000	ENSRBIG00000028456	SRSF10	100	100.000	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027625	-	90	88.415	ENSRROG00000036002	-	97	87.975	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSRROG00000043248	SRSF10	95	100.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027625	-	100	90.110	ENSSBOG00000019550	SRSF10	95	100.000	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027625	-	86	92.405	ENSSBOG00000033963	-	69	92.157	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027625	-	60	85.455	ENSSMAG00000003165	SRSF10	65	75.000	Scophthalmus_maximus
MGP_SPRETEiJ_G0027625	-	55	91.000	ENSSDUG00000010657	SRSF10	65	76.786	Seriola_dumerili
MGP_SPRETEiJ_G0027625	-	55	86.408	ENSSPAG00000020494	SRSF10	68	86.408	Stegastes_partitus
MGP_SPRETEiJ_G0027625	-	90	100.000	ENSSSCG00000036293	SRSF10	90	93.548	Sus_scrofa
MGP_SPRETEiJ_G0027625	-	89	93.902	ENSTGUG00000001178	-	100	93.902	Taeniopygia_guttata
MGP_SPRETEiJ_G0027625	-	90	99.390	ENSTTRG00000016150	SRSF10	63	99.390	Tursiops_truncatus
MGP_SPRETEiJ_G0027625	-	90	90.303	ENSUAMG00000026596	-	90	90.303	Ursus_americanus
MGP_SPRETEiJ_G0027625	-	90	95.322	ENSUAMG00000011291	-	63	95.322	Ursus_americanus
MGP_SPRETEiJ_G0027625	-	87	89.308	ENSVVUG00000026904	-	60	88.272	Vulpes_vulpes