EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027652 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb40
Alias: -
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 66975 bases
Position: chr4:133759636-133826610
Accession: 2682254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0067842	zf-C2H2	PF00096.26	5.8e-34	1	4
MGP_SPRETEiJ_P0067842	zf-C2H2	PF00096.26	5.8e-34	2	4
MGP_SPRETEiJ_P0067842	zf-C2H2	PF00096.26	5.8e-34	3	4
MGP_SPRETEiJ_P0067842	zf-C2H2	PF00096.26	5.8e-34	4	4
MGP_SPRETEiJ_P0067842	zf-met	PF12874.7	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0067842	-	7213	-	MGP_SPRETEiJ_P0067842	1257 (aa)	-	-
MGP_SPRETEiJ_T0067843	-	4402	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0067841	-	7116	-	MGP_SPRETEiJ_P0067841	1256 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027652	Zbtb40	100	78.057	ENSG00000184677	ZBTB40	100	78.057	Homo_sapiens
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.281	ENSAMEG00000014635	ZBTB40	100	76.281	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027652	Zbtb40	100	93.238	ENSANAG00000010550	ZBTB40	100	77.863	Aotus_nancymaae
MGP_SPRETEiJ_G0027652	Zbtb40	100	74.822	ENSBTAG00000016448	ZBTB40	100	74.822	Bos_taurus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.535	ENSCJAG00000005869	ZBTB40	100	77.535	Callithrix_jacchus
MGP_SPRETEiJ_G0027652	Zbtb40	100	75.591	ENSCAFG00000014644	ZBTB40	100	75.591	Canis_familiaris
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.227	ENSCAFG00020019562	ZBTB40	100	76.336	Canis_lupus_dingo
MGP_SPRETEiJ_G0027652	Zbtb40	100	74.450	ENSCHIG00000007943	ZBTB40	100	74.450	Capra_hircus
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.009	ENSTSYG00000000979	ZBTB40	100	76.009	Carlito_syrichta
MGP_SPRETEiJ_G0027652	Zbtb40	100	75.054	ENSCAPG00000009177	ZBTB40	100	75.054	Cavia_aperea
MGP_SPRETEiJ_G0027652	Zbtb40	100	75.177	ENSCPOG00000012844	ZBTB40	100	75.177	Cavia_porcellus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.208	ENSCCAG00000021093	ZBTB40	100	77.208	Cebus_capucinus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.948	ENSCATG00000031739	ZBTB40	100	77.948	Cercocebus_atys
MGP_SPRETEiJ_G0027652	Zbtb40	100	79.252	ENSCLAG00000015032	ZBTB40	100	79.252	Chinchilla_lanigera
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.760	ENSCSAG00000000911	ZBTB40	100	77.760	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027652	Zbtb40	100	93.870	ENSCHOG00000011197	ZBTB40	93	93.870	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.948	ENSCANG00000038636	ZBTB40	100	77.948	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027652	Zbtb40	100	84.328	ENSCGRG00001016016	Zbtb40	100	84.328	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027652	Zbtb40	100	84.340	ENSCGRG00000008459	Zbtb40	100	84.340	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027652	Zbtb40	88	61.538	ENSDARG00000091762	zbtb40	95	61.538	Danio_rerio
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.753	ENSDNOG00000006200	ZBTB40	100	76.753	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.644	ENSDORG00000016495	Zbtb40	100	77.644	Dipodomys_ordii
MGP_SPRETEiJ_G0027652	Zbtb40	100	75.705	ENSEASG00005007270	ZBTB40	100	75.705	Equus_asinus_asinus
MGP_SPRETEiJ_G0027652	Zbtb40	99	90.909	ENSECAG00000016319	ZBTB40	99	75.145	Equus_caballus
MGP_SPRETEiJ_G0027652	Zbtb40	83	71.564	ENSEEUG00000001708	ZBTB40	100	71.564	Erinaceus_europaeus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.099	ENSFCAG00000028182	ZBTB40	100	77.099	Felis_catus
MGP_SPRETEiJ_G0027652	Zbtb40	100	73.035	ENSFDAG00000003410	ZBTB40	100	73.035	Fukomys_damarensis
MGP_SPRETEiJ_G0027652	Zbtb40	100	78.166	ENSGGOG00000010010	ZBTB40	100	78.166	Gorilla_gorilla
MGP_SPRETEiJ_G0027652	Zbtb40	100	92.549	ENSHGLG00000016950	ZBTB40	95	67.393	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027652	Zbtb40	100	92.549	ENSHGLG00100008314	ZBTB40	95	67.393	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.050	ENSSTOG00000009598	ZBTB40	100	77.050	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.998	ENSJJAG00000018013	Zbtb40	100	78.316	Jaculus_jaculus
MGP_SPRETEiJ_G0027652	Zbtb40	100	78.175	ENSLAFG00000006483	ZBTB40	100	78.175	Loxodonta_africana
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.729	ENSMFAG00000043032	ZBTB40	100	77.729	Macaca_fascicularis
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.729	ENSMMUG00000018618	ZBTB40	100	77.729	Macaca_mulatta
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.729	ENSMNEG00000032628	ZBTB40	100	77.729	Macaca_nemestrina
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.948	ENSMLEG00000027910	ZBTB40	100	77.948	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027652	Zbtb40	100	84.499	ENSMAUG00000010466	Zbtb40	100	84.499	Mesocricetus_auratus
MGP_SPRETEiJ_G0027652	Zbtb40	100	81.066	ENSMICG00000007464	ZBTB40	100	81.066	Microcebus_murinus
MGP_SPRETEiJ_G0027652	Zbtb40	100	86.577	ENSMOCG00000013259	Zbtb40	100	86.577	Microtus_ochrogaster
MGP_SPRETEiJ_G0027652	Zbtb40	100	98.092	MGP_CAROLIEiJ_G0026672	Zbtb40	100	98.092	Mus_caroli
MGP_SPRETEiJ_G0027652	Zbtb40	100	99.046	ENSMUSG00000060862	Zbtb40	100	99.046	Mus_musculus
MGP_SPRETEiJ_G0027652	Zbtb40	100	95.469	MGP_PahariEiJ_G0029005	Zbtb40	100	95.469	Mus_pahari
MGP_SPRETEiJ_G0027652	Zbtb40	100	74.783	ENSMPUG00000015961	ZBTB40	100	74.783	Mustela_putorius_furo
MGP_SPRETEiJ_G0027652	Zbtb40	100	80.858	ENSNGAG00000019354	Zbtb40	100	80.858	Nannospalax_galili
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.729	ENSNLEG00000008268	ZBTB40	100	77.729	Nomascus_leucogenys
MGP_SPRETEiJ_G0027652	Zbtb40	95	76.948	ENSOPRG00000003103	ZBTB40	95	76.948	Ochotona_princeps
MGP_SPRETEiJ_G0027652	Zbtb40	100	78.661	ENSOGAG00000004797	ZBTB40	100	78.661	Otolemur_garnettii
MGP_SPRETEiJ_G0027652	Zbtb40	100	74.686	ENSOARG00000008054	ZBTB40	100	74.686	Ovis_aries
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.838	ENSPPAG00000034112	ZBTB40	100	77.838	Pan_paniscus
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.772	ENSPPRG00000021468	ZBTB40	100	76.772	Panthera_pardus
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.663	ENSPTIG00000010874	ZBTB40	100	76.663	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.838	ENSPTRG00000000315	ZBTB40	100	77.838	Pan_troglodytes
MGP_SPRETEiJ_G0027652	Zbtb40	100	80.159	ENSPANG00000018749	ZBTB40	100	80.159	Papio_anubis
MGP_SPRETEiJ_G0027652	Zbtb40	100	85.624	ENSPEMG00000009389	Zbtb40	100	85.624	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027652	Zbtb40	100	64.415	ENSPCIG00000026425	ZBTB40	100	64.650	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.524	ENSPPYG00000001752	ZBTB40	100	77.524	Pongo_abelii
MGP_SPRETEiJ_G0027652	Zbtb40	100	95.714	ENSPCOG00000006905	ZBTB40	93	95.714	Propithecus_coquereli
MGP_SPRETEiJ_G0027652	Zbtb40	100	90.453	ENSRNOG00000022039	Zbtb40	100	90.453	Rattus_norvegicus
MGP_SPRETEiJ_G0027652	Zbtb40	100	78.057	ENSRBIG00000034608	ZBTB40	100	78.057	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.948	ENSRROG00000034514	ZBTB40	100	77.948	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027652	Zbtb40	100	77.099	ENSSBOG00000027235	ZBTB40	100	77.099	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.227	ENSUAMG00000020372	ZBTB40	100	76.227	Ursus_americanus
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.663	ENSUMAG00000013539	ZBTB40	100	76.663	Ursus_maritimus
MGP_SPRETEiJ_G0027652	Zbtb40	100	76.445	ENSVVUG00000025752	ZBTB40	100	76.554	Vulpes_vulpes