EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027723 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: Miz1|Zfp100|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 22997 bases
Position: chr4:138551633-138574629
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_SPRETEiJ_P0068146	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_SPRETEiJ_P0068146	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0068148	-	2973	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068149	-	337	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068146	-	2722	-	MGP_SPRETEiJ_P0068146	794 (aa)	-	UPI0000020F45
MGP_SPRETEiJ_T0068147	-	3459	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068151	-	771	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068150	-	785	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068152	-	867	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0027723	Zbtb17	78	39.568	MGP_SPRETEiJ_G0025327	Gzf1	83	37.118
MGP_SPRETEiJ_G0027723	Zbtb17	71	38.798	MGP_SPRETEiJ_G0022052	Zfp945	93	39.860
MGP_SPRETEiJ_G0027723	Zbtb17	74	34.627	MGP_SPRETEiJ_G0022057	Zscan10	75	43.165
MGP_SPRETEiJ_G0027723	Zbtb17	54	46.512	MGP_SPRETEiJ_G0032697	Zfp1	67	42.083
MGP_SPRETEiJ_G0027723	Zbtb17	56	40.741	MGP_SPRETEiJ_G0030196	-	78	35.743
MGP_SPRETEiJ_G0027723	Zbtb17	55	42.324	MGP_SPRETEiJ_G0025181	Zfp661	60	43.089
MGP_SPRETEiJ_G0027723	Zbtb17	79	32.955	MGP_SPRETEiJ_G0019811	Zfp131	72	32.955
MGP_SPRETEiJ_G0027723	Zbtb17	64	32.190	MGP_SPRETEiJ_G0025644	Zfp64	73	32.923
MGP_SPRETEiJ_G0027723	Zbtb17	62	50.909	MGP_SPRETEiJ_G0028173	Zbtb49	62	67.742
MGP_SPRETEiJ_G0027723	Zbtb17	60	38.132	MGP_SPRETEiJ_G0033309	Zbtb16	61	36.585
MGP_SPRETEiJ_G0027723	Zbtb17	55	40.764	MGP_SPRETEiJ_G0017272	Zfp867	81	40.764
MGP_SPRETEiJ_G0027723	Zbtb17	58	42.857	MGP_SPRETEiJ_G0030713	Zfp715	85	56.410
MGP_SPRETEiJ_G0027723	Zbtb17	74	44.444	MGP_SPRETEiJ_G0017458	Bcl6b	68	45.312
MGP_SPRETEiJ_G0027723	Zbtb17	57	37.557	MGP_SPRETEiJ_G0029467	Prdm5	75	38.730
MGP_SPRETEiJ_G0027723	Zbtb17	63	38.614	MGP_SPRETEiJ_G0029346	Repin1	93	38.614
MGP_SPRETEiJ_G0027723	Zbtb17	79	46.354	MGP_SPRETEiJ_G0025835	Mynn	85	46.354
MGP_SPRETEiJ_G0027723	Zbtb17	58	47.674	MGP_SPRETEiJ_G0030709	-	81	47.674
MGP_SPRETEiJ_G0027723	Zbtb17	61	42.727	MGP_SPRETEiJ_G0023360	Zfp236	78	41.772
MGP_SPRETEiJ_G0027723	Zbtb17	59	35.884	MGP_SPRETEiJ_G0030524	Zfp59	80	40.969
MGP_SPRETEiJ_G0027723	Zbtb17	61	43.939	MGP_SPRETEiJ_G0030415	Zfp112	61	43.807
MGP_SPRETEiJ_G0027723	Zbtb17	55	42.391	MGP_SPRETEiJ_G0030417	Zfp114	67	42.391
MGP_SPRETEiJ_G0027723	Zbtb17	62	43.182	MGP_SPRETEiJ_G0030416	Zfp235	71	44.248
MGP_SPRETEiJ_G0027723	Zbtb17	56	41.518	MGP_SPRETEiJ_G0019129	Zkscan4	50	41.518
MGP_SPRETEiJ_G0027723	Zbtb17	59	36.986	MGP_SPRETEiJ_G0017233	Zfp672	99	39.474
MGP_SPRETEiJ_G0027723	Zbtb17	55	41.532	MGP_SPRETEiJ_G0031614	-	86	44.240
MGP_SPRETEiJ_G0027723	Zbtb17	58	42.857	MGP_SPRETEiJ_G0031612	Zfp768	51	41.441
MGP_SPRETEiJ_G0027723	Zbtb17	55	41.532	MGP_SPRETEiJ_G0031613	-	86	44.240
MGP_SPRETEiJ_G0027723	Zbtb17	62	34.734	MGP_SPRETEiJ_G0032539	Zfp319	91	37.805
MGP_SPRETEiJ_G0027723	Zbtb17	69	44.706	MGP_SPRETEiJ_G0030586	Zfp420	97	44.706
MGP_SPRETEiJ_G0027723	Zbtb17	58	43.413	MGP_SPRETEiJ_G0030420	Zfp108	66	43.544
MGP_SPRETEiJ_G0027723	Zbtb17	56	43.506	MGP_SPRETEiJ_G0030421	-	99	43.068
MGP_SPRETEiJ_G0027723	Zbtb17	59	44.086	MGP_SPRETEiJ_G0030423	Zfp94	76	44.086
MGP_SPRETEiJ_G0027723	Zbtb17	59	32.021	MGP_SPRETEiJ_G0030453	Zfp574	71	38.532
MGP_SPRETEiJ_G0027723	Zbtb17	81	38.288	MGP_SPRETEiJ_G0019560	Zfp748	91	44.109
MGP_SPRETEiJ_G0027723	Zbtb17	62	41.742	MGP_SPRETEiJ_G0019544	Zfp759	87	42.262
MGP_SPRETEiJ_G0027723	Zbtb17	56	41.532	MGP_SPRETEiJ_G0019543	-	62	50.000
MGP_SPRETEiJ_G0027723	Zbtb17	58	38.433	MGP_SPRETEiJ_G0030525	-	81	38.433
MGP_SPRETEiJ_G0027723	Zbtb17	79	38.433	MGP_SPRETEiJ_G0030526	-	86	41.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027723	Zbtb17	97	62.313	ENSACLG00000016405	zbtb17	84	72.650	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027723	Zbtb17	98	95.524	ENSCGRG00001019408	Zbtb17	100	95.472	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027723	Zbtb17	57	75.180	ENSEBUG00000014704	ZBTB17	88	75.180	Eptatretus_burgeri
MGP_SPRETEiJ_G0027723	Zbtb17	60	78.218	ENSKMAG00000004080	zbtb17	82	76.718	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027723	Zbtb17	98	96.031	ENSMAUG00000001376	Zbtb17	100	95.844	Mesocricetus_auratus
MGP_SPRETEiJ_G0027723	Zbtb17	98	86.003	ENSMOCG00000005017	Zbtb17	100	90.323	Microtus_ochrogaster
MGP_SPRETEiJ_G0027723	Zbtb17	80	68.639	ENSMALG00000008493	zbtb17	66	78.814	Monopterus_albus
MGP_SPRETEiJ_G0027723	Zbtb17	100	99.496	MGP_CAROLIEiJ_G0026744	Zbtb17	100	99.496	Mus_caroli
MGP_SPRETEiJ_G0027723	Zbtb17	100	100.000	ENSMUSG00000006215	Zbtb17	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0027723	Zbtb17	100	99.244	MGP_PahariEiJ_G0029075	Zbtb17	100	99.244	Mus_pahari
MGP_SPRETEiJ_G0027723	Zbtb17	100	90.692	ENSMLUG00000025202	ZBTB17	100	90.692	Myotis_lucifugus
MGP_SPRETEiJ_G0027723	Zbtb17	79	49.113	ENSNBRG00000021960	zbtb17	90	66.412	Neolamprologus_brichardi
MGP_SPRETEiJ_G0027723	Zbtb17	73	79.579	ENSORLG00015022210	zbtb17	78	79.079	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027723	Zbtb17	94	77.874	ENSOMEG00000011926	zbtb17	77	77.874	Oryzias_melastigma
MGP_SPRETEiJ_G0027723	Zbtb17	100	96.222	ENSPEMG00000021923	Zbtb17	100	96.222	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027723	Zbtb17	59	67.257	ENSPREG00000010261	zbtb17	86	77.605	Poecilia_reticulata
MGP_SPRETEiJ_G0027723	Zbtb17	98	91.128	ENSPVAG00000013802	ZBTB17	100	90.898	Pteropus_vampyrus
MGP_SPRETEiJ_G0027723	Zbtb17	78	71.038	ENSPNYG00000012572	zbtb17	74	68.720	Pundamilia_nyererei
MGP_SPRETEiJ_G0027723	Zbtb17	100	96.754	ENSRNOG00000010436	Zbtb17	100	96.754	Rattus_norvegicus
MGP_SPRETEiJ_G0027723	Zbtb17	61	78.020	ENSSLDG00000013170	zbtb17	93	71.848	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027723	Zbtb17	77	77.966	ENSTRUG00000003277	zbtb17	98	86.992	Takifugu_rubripes
MGP_SPRETEiJ_G0027723	Zbtb17	97	62.562	ENSTNIG00000010902	zbtb17	64	74.131	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027723	Zbtb17	76	69.884	ENSTBEG00000005023	-	87	84.177	Tupaia_belangeri