EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027857 (Gene tree)
Gene ID: -
Gene Symbol: Lrrc47
Alias: 2900010D03Rik
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 10490 bases
Position: chr4:150602234-150612723
Accession: 1920196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0068717	B3_4	PF03483.17	1.2e-09	1	1
MGP_SPRETEiJ_P0068716	B3_4	PF03483.17	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0068719	-	378	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068718	-	1406	-	MGP_SPRETEiJ_P0068718	438 (aa)	-	-
MGP_SPRETEiJ_T0068717	-	3440	-	MGP_SPRETEiJ_P0068717	582 (aa)	-	-
MGP_SPRETEiJ_T0068716	-	3513	-	MGP_SPRETEiJ_P0068716	604 (aa)	-	-
MGP_SPRETEiJ_T0068720	-	790	-	MGP_SPRETEiJ_P0068720	122 (aa)	-	-
MGP_SPRETEiJ_T0068721	-	480	-	MGP_SPRETEiJ_P0068721	78 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027857	Lrrc47	99	86.082	ENSG00000130764	LRRC47	99	86.851	Homo_sapiens
MGP_SPRETEiJ_G0027857	Lrrc47	97	54.930	ENSAPOG00000019553	lrrc47	98	55.300	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027857	Lrrc47	79	75.870	ENSAMEG00000009152	LRRC47	100	75.870	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027857	Lrrc47	66	67.617	ENSAPLG00000003167	LRRC47	100	67.358	Anas_platyrhynchos
MGP_SPRETEiJ_G0027857	Lrrc47	65	64.175	ENSACAG00000008267	LRRC47	99	65.873	Anolis_carolinensis
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.052	ENSANAG00000025576	LRRC47	99	85.813	Aotus_nancymaae
MGP_SPRETEiJ_G0027857	Lrrc47	99	81.944	ENSBTAG00000004738	LRRC47	99	82.639	Bos_taurus
MGP_SPRETEiJ_G0027857	Lrrc47	98	80.870	ENSCAFG00000019492	LRRC47	94	80.935	Canis_familiaris
MGP_SPRETEiJ_G0027857	Lrrc47	100	80.342	ENSCAFG00020009667	LRRC47	99	81.109	Canis_lupus_dingo
MGP_SPRETEiJ_G0027857	Lrrc47	99	82.639	ENSCHIG00000022607	LRRC47	98	83.246	Capra_hircus
MGP_SPRETEiJ_G0027857	Lrrc47	95	84.560	ENSTSYG00000009326	LRRC47	96	85.637	Carlito_syrichta
MGP_SPRETEiJ_G0027857	Lrrc47	64	82.181	ENSCAPG00000016517	LRRC47	100	82.181	Cavia_aperea
MGP_SPRETEiJ_G0027857	Lrrc47	99	86.379	ENSCPOG00000014931	LRRC47	100	84.323	Cavia_porcellus
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.223	ENSCCAG00000024895	LRRC47	99	85.986	Cebus_capucinus
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.285	ENSCATG00000029337	LRRC47	99	87.543	Cercocebus_atys
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.414	ENSCLAG00000006093	LRRC47	99	87.674	Chinchilla_lanigera
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.285	ENSCSAG00000000727	LRRC47	99	87.543	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027857	Lrrc47	99	60.797	ENSCPBG00000019404	LRRC47	98	61.214	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027857	Lrrc47	78	82.863	ENSCANG00000030701	LRRC47	96	84.599	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027857	Lrrc47	98	93.357	ENSCGRG00001015159	Lrrc47	93	91.919	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027857	Lrrc47	65	90.981	ENSCGRG00000017336	Lrrc47	100	91.176	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027857	Lrrc47	99	52.921	ENSCSEG00000006217	lrrc47	95	53.322	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027857	Lrrc47	64	80.851	ENSDORG00000016594	Lrrc47	99	80.851	Dipodomys_ordii
MGP_SPRETEiJ_G0027857	Lrrc47	99	82.818	ENSEASG00005021788	LRRC47	99	82.872	Equus_asinus_asinus
MGP_SPRETEiJ_G0027857	Lrrc47	99	82.526	ENSECAG00000022472	LRRC47	90	82.526	Equus_caballus
MGP_SPRETEiJ_G0027857	Lrrc47	99	52.284	ENSELUG00000017544	lrrc47	97	52.911	Esox_lucius
MGP_SPRETEiJ_G0027857	Lrrc47	93	81.718	ENSFCAG00000011632	LRRC47	96	82.633	Felis_catus
MGP_SPRETEiJ_G0027857	Lrrc47	73	64.965	ENSFALG00000009631	LRRC47	99	65.138	Ficedula_albicollis
MGP_SPRETEiJ_G0027857	Lrrc47	96	51.767	ENSGMOG00000015674	lrrc47	97	52.557	Gadus_morhua
MGP_SPRETEiJ_G0027857	Lrrc47	99	61.552	ENSGALG00000050995	LRRC47	100	62.586	Gallus_gallus
MGP_SPRETEiJ_G0027857	Lrrc47	99	53.713	ENSGACG00000005550	lrrc47	99	54.101	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027857	Lrrc47	99	63.394	ENSGAGG00000022584	LRRC47	99	63.529	Gopherus_agassizii
MGP_SPRETEiJ_G0027857	Lrrc47	99	86.082	ENSGGOG00000015571	LRRC47	99	86.851	Gorilla_gorilla
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.172	ENSHGLG00000018278	LRRC47	100	83.333	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027857	Lrrc47	69	81.390	ENSHGLG00100008507	LRRC47	100	81.390	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027857	Lrrc47	99	54.419	ENSHCOG00000006348	lrrc47	97	53.899	Hippocampus_comes
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.345	ENSSTOG00000027559	LRRC47	99	87.153	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027857	Lrrc47	98	88.000	ENSJJAG00000017474	Lrrc47	99	87.037	Jaculus_jaculus
MGP_SPRETEiJ_G0027857	Lrrc47	99	54.217	ENSKMAG00000003414	lrrc47	99	54.167	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027857	Lrrc47	99	80.822	ENSLAFG00000011657	LRRC47	99	82.526	Loxodonta_africana
MGP_SPRETEiJ_G0027857	Lrrc47	74	95.610	ENSMFAG00000045730	LRRC47	99	95.610	Macaca_fascicularis
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.716	ENSMNEG00000042488	LRRC47	99	87.716	Macaca_nemestrina
MGP_SPRETEiJ_G0027857	Lrrc47	76	81.375	ENSMLEG00000043735	LRRC47	91	83.149	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027857	Lrrc47	99	93.750	ENSMAUG00000021337	Lrrc47	97	94.561	Mesocricetus_auratus
MGP_SPRETEiJ_G0027857	Lrrc47	99	84.854	ENSMICG00000026816	LRRC47	99	84.922	Microcebus_murinus
MGP_SPRETEiJ_G0027857	Lrrc47	99	94.464	ENSMOCG00000021279	Lrrc47	99	94.599	Microtus_ochrogaster
MGP_SPRETEiJ_G0027857	Lrrc47	99	52.768	ENSMMOG00000017007	lrrc47	99	53.043	Mola_mola
MGP_SPRETEiJ_G0027857	Lrrc47	98	70.804	ENSMODG00000006554	LRRC47	98	70.804	Monodelphis_domestica
MGP_SPRETEiJ_G0027857	Lrrc47	100	99.172	MGP_CAROLIEiJ_G0026864	Lrrc47	100	99.172	Mus_caroli
MGP_SPRETEiJ_G0027857	Lrrc47	100	99.503	ENSMUSG00000029028	Lrrc47	100	99.503	Mus_musculus
MGP_SPRETEiJ_G0027857	Lrrc47	100	97.848	MGP_PahariEiJ_G0029212	Lrrc47	100	97.848	Mus_pahari
MGP_SPRETEiJ_G0027857	Lrrc47	64	74.603	ENSMPUG00000007321	LRRC47	75	74.603	Mustela_putorius_furo
MGP_SPRETEiJ_G0027857	Lrrc47	98	90.526	ENSNGAG00000022153	Lrrc47	99	91.115	Nannospalax_galili
MGP_SPRETEiJ_G0027857	Lrrc47	99	82.302	ENSNLEG00000008131	LRRC47	99	83.045	Nomascus_leucogenys
MGP_SPRETEiJ_G0027857	Lrrc47	84	84.458	ENSODEG00000010882	LRRC47	93	84.458	Octodon_degus
MGP_SPRETEiJ_G0027857	Lrrc47	96	56.661	ENSORLG00000002532	lrrc47	99	56.553	Oryzias_latipes
MGP_SPRETEiJ_G0027857	Lrrc47	99	56.627	ENSORLG00020019601	lrrc47	99	56.522	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027857	Lrrc47	99	56.282	ENSORLG00015014040	lrrc47	99	56.174	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027857	Lrrc47	99	54.844	ENSOMEG00000008989	lrrc47	99	54.957	Oryzias_melastigma
MGP_SPRETEiJ_G0027857	Lrrc47	99	84.192	ENSOGAG00000001553	LRRC47	99	83.910	Otolemur_garnettii
MGP_SPRETEiJ_G0027857	Lrrc47	99	78.819	ENSOARG00000015290	LRRC47	99	79.514	Ovis_aries
MGP_SPRETEiJ_G0027857	Lrrc47	97	82.201	ENSPPAG00000036370	-	99	83.138	Pan_paniscus
MGP_SPRETEiJ_G0027857	Lrrc47	99	80.763	ENSPPRG00000005261	LRRC47	98	81.802	Panthera_pardus
MGP_SPRETEiJ_G0027857	Lrrc47	99	86.082	ENSPTRG00000000068	LRRC47	99	86.851	Pan_troglodytes
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.285	ENSPANG00000012437	LRRC47	99	87.543	Papio_anubis
MGP_SPRETEiJ_G0027857	Lrrc47	65	65.354	ENSPSIG00000004196	LRRC47	100	65.354	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027857	Lrrc47	64	94.385	ENSPEMG00000021068	Lrrc47	100	94.385	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027857	Lrrc47	98	71.979	ENSPCIG00000003638	LRRC47	98	73.647	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027857	Lrrc47	89	56.430	ENSPFOG00000000992	lrrc47	90	56.538	Poecilia_formosa
MGP_SPRETEiJ_G0027857	Lrrc47	99	54.861	ENSPLAG00000008077	lrrc47	99	54.957	Poecilia_latipinna
MGP_SPRETEiJ_G0027857	Lrrc47	99	54.783	ENSPMEG00000007367	lrrc47	99	54.957	Poecilia_mexicana
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.911	ENSPPYG00000001960	LRRC47	99	86.678	Pongo_abelii
MGP_SPRETEiJ_G0027857	Lrrc47	99	85.442	ENSPCOG00000019161	LRRC47	99	85.442	Propithecus_coquereli
MGP_SPRETEiJ_G0027857	Lrrc47	99	80.412	ENSPVAG00000009839	LRRC47	99	81.488	Pteropus_vampyrus
MGP_SPRETEiJ_G0027857	Lrrc47	99	53.688	ENSPNAG00000017982	lrrc47	98	53.913	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027857	Lrrc47	99	95.682	ENSRNOG00000024796	Lrrc47	99	95.645	Rattus_norvegicus
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.285	ENSRBIG00000019437	LRRC47	99	87.543	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027857	Lrrc47	99	87.285	ENSRROG00000043182	LRRC47	99	87.543	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027857	Lrrc47	91	80.211	ENSSBOG00000026334	LRRC47	97	81.053	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027857	Lrrc47	98	59.932	ENSSHAG00000007360	LRRC47	98	60.068	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027857	Lrrc47	98	54.231	ENSSMAG00000009344	lrrc47	99	54.530	Scophthalmus_maximus
MGP_SPRETEiJ_G0027857	Lrrc47	96	54.610	ENSSDUG00000014618	lrrc47	97	55.142	Seriola_dumerili
MGP_SPRETEiJ_G0027857	Lrrc47	96	54.965	ENSSLDG00000018908	lrrc47	97	54.965	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027857	Lrrc47	98	61.263	ENSSPUG00000010277	LRRC47	96	62.544	Sphenodon_punctatus
MGP_SPRETEiJ_G0027857	Lrrc47	99	55.709	ENSSPAG00000005188	lrrc47	99	56.250	Stegastes_partitus
MGP_SPRETEiJ_G0027857	Lrrc47	99	80.756	ENSSSCG00000039516	LRRC47	99	81.834	Sus_scrofa
MGP_SPRETEiJ_G0027857	Lrrc47	70	65.271	ENSTGUG00000002737	LRRC47	99	64.532	Taeniopygia_guttata
MGP_SPRETEiJ_G0027857	Lrrc47	99	52.696	ENSTRUG00000017696	lrrc47	99	52.797	Takifugu_rubripes
MGP_SPRETEiJ_G0027857	Lrrc47	99	52.604	ENSTNIG00000010923	lrrc47	99	52.797	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027857	Lrrc47	99	81.100	ENSTTRG00000011751	LRRC47	99	82.038	Tursiops_truncatus
MGP_SPRETEiJ_G0027857	Lrrc47	88	78.558	ENSUAMG00000012080	LRRC47	97	79.727	Ursus_americanus
MGP_SPRETEiJ_G0027857	Lrrc47	65	72.178	ENSUMAG00000010781	LRRC47	81	73.753	Ursus_maritimus
MGP_SPRETEiJ_G0027857	Lrrc47	99	72.789	ENSVVUG00000027118	LRRC47	98	71.626	Vulpes_vulpes
MGP_SPRETEiJ_G0027857	Lrrc47	99	60.000	ENSXETG00000006029	lrrc47	99	59.931	Xenopus_tropicalis
MGP_SPRETEiJ_G0027857	Lrrc47	98	54.912	ENSXCOG00000002813	lrrc47	98	54.912	Xiphophorus_couchianus
MGP_SPRETEiJ_G0027857	Lrrc47	98	54.720	ENSXMAG00000019386	lrrc47	99	55.497	Xiphophorus_maculatus