EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027898 (Gene tree)
Gene ID: -
Gene Symbol: Mrpl20
Alias: 2610008D01Rik|4930425I20Rik
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 11718 bases
Position: chr4:152476046-152487763
Accession: 2137221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0068942	Ribosomal_L20	PF00453.18	5.5e-35	1	1
MGP_SPRETEiJ_P0068945	Ribosomal_L20	PF00453.18	1.1e-22	1	1
MGP_SPRETEiJ_P0068943	Ribosomal_L20	PF00453.18	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0068946	-	579	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0068944	-	820	-	MGP_SPRETEiJ_P0068944	149 (aa)	-	UPI00000230B4
MGP_SPRETEiJ_T0068945	-	442	-	MGP_SPRETEiJ_P0068945	96 (aa)	-	UPI0003B92A25
MGP_SPRETEiJ_T0068942	-	764	-	MGP_SPRETEiJ_P0068942	149 (aa)	-	UPI00000230B4
MGP_SPRETEiJ_T0068943	-	494	-	MGP_SPRETEiJ_P0068943	112 (aa)	-	UPI0003B92A02
MGP_SPRETEiJ_T0068941	-	495	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027898	Mrpl20	100	87.919	ENSG00000242485	MRPL20	100	87.919	Homo_sapiens
MGP_SPRETEiJ_G0027898	Mrpl20	99	73.684	ENSAPOG00000011835	mrpl20	100	73.684	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027898	Mrpl20	93	93.525	ENSAMEG00000013932	MRPL20	93	93.525	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.918	ENSACIG00000019179	mrpl20	98	71.918	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.233	ENSAOCG00000007734	mrpl20	98	71.233	Amphiprion_ocellaris
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSAPEG00000014049	mrpl20	98	70.548	Amphiprion_percula
MGP_SPRETEiJ_G0027898	Mrpl20	96	76.087	ENSATEG00000007369	mrpl20	98	71.233	Anabas_testudineus
MGP_SPRETEiJ_G0027898	Mrpl20	99	71.622	ENSACAG00000009143	MRPL20	99	71.622	Anolis_carolinensis
MGP_SPRETEiJ_G0027898	Mrpl20	100	79.605	ENSANAG00000021078	-	100	79.605	Aotus_nancymaae
MGP_SPRETEiJ_G0027898	Mrpl20	91	71.111	ENSACLG00000021726	mrpl20	87	71.111	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027898	Mrpl20	80	68.908	ENSAMXG00000035403	mrpl20	84	68.908	Astyanax_mexicanus
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSBTAG00000004872	MRPL20	75	88.591	Bos_taurus
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSCJAG00000039231	-	100	89.262	Callithrix_jacchus
MGP_SPRETEiJ_G0027898	Mrpl20	100	91.946	ENSCAFG00000019259	MRPL20	100	91.946	Canis_familiaris
MGP_SPRETEiJ_G0027898	Mrpl20	74	90.361	ENSCAFG00020025880	-	65	89.189	Canis_lupus_dingo
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSCHIG00000010545	MRPL20	100	88.591	Capra_hircus
MGP_SPRETEiJ_G0027898	Mrpl20	100	93.960	ENSTSYG00000033620	MRPL20	100	93.960	Carlito_syrichta
MGP_SPRETEiJ_G0027898	Mrpl20	100	91.946	ENSCPOG00000023001	MRPL20	100	91.946	Cavia_porcellus
MGP_SPRETEiJ_G0027898	Mrpl20	100	90.604	ENSCCAG00000032768	-	100	90.604	Cebus_capucinus
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSCATG00000033927	MRPL20	100	88.591	Cercocebus_atys
MGP_SPRETEiJ_G0027898	Mrpl20	86	78.125	ENSCATG00000040437	-	67	78.125	Cercocebus_atys
MGP_SPRETEiJ_G0027898	Mrpl20	100	90.179	ENSCLAG00000009757	-	100	90.179	Chinchilla_lanigera
MGP_SPRETEiJ_G0027898	Mrpl20	97	77.419	ENSCLAG00000011866	-	100	60.403	Chinchilla_lanigera
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSCSAG00000000688	-	100	88.591	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027898	Mrpl20	100	87.919	ENSCSAG00000019479	-	100	87.919	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027898	Mrpl20	100	78.571	ENSCPBG00000022905	MRPL20	100	78.571	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0027898	Mrpl20	100	76.744	ENSCANG00000039625	MRPL20	100	76.744	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	95.536	ENSCGRG00001024028	Mrpl20	100	95.536	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027898	Mrpl20	100	95.536	ENSCGRG00000007447	Mrpl20	100	95.536	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027898	Mrpl20	97	70.968	ENSCSEG00000002016	mrpl20	85	69.863	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027898	Mrpl20	98	68.493	ENSCVAG00000022768	mrpl20	99	68.493	Cyprinodon_variegatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	63.758	ENSDARG00000090462	mrpl20	100	63.758	Danio_rerio
MGP_SPRETEiJ_G0027898	Mrpl20	99	87.162	ENSDNOG00000044958	MRPL20	99	87.162	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027898	Mrpl20	74	91.566	ENSDORG00000028591	Mrpl20	100	91.566	Dipodomys_ordii
MGP_SPRETEiJ_G0027898	Mrpl20	90	39.535	FBgn0036335	mRpL20	82	39.837	Drosophila_melanogaster
MGP_SPRETEiJ_G0027898	Mrpl20	99	71.622	ENSETEG00000012315	MRPL20	99	71.622	Echinops_telfairi
MGP_SPRETEiJ_G0027898	Mrpl20	99	65.986	ENSEBUG00000002214	mrpl20	99	65.986	Eptatretus_burgeri
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.933	ENSEASG00005014515	MRPL20	100	89.933	Equus_asinus_asinus
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.933	ENSECAG00000018364	MRPL20	100	89.933	Equus_caballus
MGP_SPRETEiJ_G0027898	Mrpl20	81	69.167	ENSEEUG00000004596	-	100	69.167	Erinaceus_europaeus
MGP_SPRETEiJ_G0027898	Mrpl20	100	71.875	ENSELUG00000013398	mrpl20	98	71.918	Esox_lucius
MGP_SPRETEiJ_G0027898	Mrpl20	99	91.837	ENSFCAG00000033203	MRPL20	99	91.837	Felis_catus
MGP_SPRETEiJ_G0027898	Mrpl20	100	72.483	ENSFALG00000009334	MRPL20	100	72.483	Ficedula_albicollis
MGP_SPRETEiJ_G0027898	Mrpl20	100	90.604	ENSFDAG00000013320	MRPL20	100	90.604	Fukomys_damarensis
MGP_SPRETEiJ_G0027898	Mrpl20	98	67.808	ENSFHEG00000004769	mrpl20	99	67.808	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027898	Mrpl20	96	69.565	ENSGMOG00000008125	mrpl20	100	67.361	Gadus_morhua
MGP_SPRETEiJ_G0027898	Mrpl20	100	77.181	ENSGALG00000001542	MRPL20	100	77.181	Gallus_gallus
MGP_SPRETEiJ_G0027898	Mrpl20	98	69.863	ENSGAFG00000021580	mrpl20	99	69.863	Gambusia_affinis
MGP_SPRETEiJ_G0027898	Mrpl20	98	70.548	ENSGACG00000001134	mrpl20	98	70.548	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	77.852	ENSGAGG00000001945	MRPL20	100	77.852	Gopherus_agassizii
MGP_SPRETEiJ_G0027898	Mrpl20	100	87.919	ENSGGOG00000027251	-	100	87.919	Gorilla_gorilla
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSHBUG00000023626	mrpl20	98	70.548	Haplochromis_burtoni
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSHGLG00000017538	MRPL20	100	88.591	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSHGLG00100012816	MRPL20	100	89.262	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027898	Mrpl20	96	71.739	ENSHCOG00000005830	mrpl20	98	65.068	Hippocampus_comes
MGP_SPRETEiJ_G0027898	Mrpl20	63	45.000	ENSHCOG00000010669	-	83	45.000	Hippocampus_comes
MGP_SPRETEiJ_G0027898	Mrpl20	99	66.667	ENSIPUG00000018055	mrpl20	99	66.667	Ictalurus_punctatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	93.750	ENSJJAG00000020728	Mrpl20	100	93.750	Jaculus_jaculus
MGP_SPRETEiJ_G0027898	Mrpl20	96	72.826	ENSKMAG00000021650	mrpl20	98	70.548	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027898	Mrpl20	97	70.968	ENSLBEG00000021562	mrpl20	98	69.863	Labrus_bergylta
MGP_SPRETEiJ_G0027898	Mrpl20	100	80.537	ENSLACG00000019149	MRPL20	100	80.537	Latimeria_chalumnae
MGP_SPRETEiJ_G0027898	Mrpl20	99	92.568	ENSLAFG00000010706	MRPL20	99	92.568	Loxodonta_africana
MGP_SPRETEiJ_G0027898	Mrpl20	94	76.429	ENSMFAG00000046195	-	83	76.429	Macaca_fascicularis
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSMFAG00000043214	MRPL20	100	88.591	Macaca_fascicularis
MGP_SPRETEiJ_G0027898	Mrpl20	96	85.870	ENSMMUG00000038877	MRPL20	99	62.069	Macaca_mulatta
MGP_SPRETEiJ_G0027898	Mrpl20	89	78.195	ENSMNEG00000000027	-	68	78.195	Macaca_nemestrina
MGP_SPRETEiJ_G0027898	Mrpl20	100	92.771	ENSMNEG00000041891	MRPL20	100	88.591	Macaca_nemestrina
MGP_SPRETEiJ_G0027898	Mrpl20	81	90.833	ENSMLEG00000037086	MRPL20	100	90.833	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027898	Mrpl20	91	76.296	ENSMLEG00000037605	-	83	76.296	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.918	ENSMAMG00000023884	mrpl20	98	71.918	Mastacembelus_armatus
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSMZEG00005011376	mrpl20	98	70.548	Maylandia_zebra
MGP_SPRETEiJ_G0027898	Mrpl20	81	77.686	ENSMGAG00000002774	MRPL20	82	77.686	Meleagris_gallopavo
MGP_SPRETEiJ_G0027898	Mrpl20	100	94.643	ENSMAUG00000013299	Mrpl20	100	94.643	Mesocricetus_auratus
MGP_SPRETEiJ_G0027898	Mrpl20	100	90.604	ENSMICG00000041892	MRPL20	100	90.604	Microcebus_murinus
MGP_SPRETEiJ_G0027898	Mrpl20	100	95.536	ENSMOCG00000000404	-	100	95.536	Microtus_ochrogaster
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSMOCG00000009545	-	100	89.262	Microtus_ochrogaster
MGP_SPRETEiJ_G0027898	Mrpl20	97	68.807	ENSMMOG00000021753	mrpl20	97	68.807	Mola_mola
MGP_SPRETEiJ_G0027898	Mrpl20	100	79.866	ENSMODG00000006562	MRPL20	100	79.866	Monodelphis_domestica
MGP_SPRETEiJ_G0027898	Mrpl20	96	72.826	ENSMALG00000018593	mrpl20	98	70.548	Monopterus_albus
MGP_SPRETEiJ_G0027898	Mrpl20	100	99.329	MGP_CAROLIEiJ_G0026904	Mrpl20	100	99.329	Mus_caroli
MGP_SPRETEiJ_G0027898	Mrpl20	100	100.000	ENSMUSG00000029066	Mrpl20	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0027898	Mrpl20	100	93.960	MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	Mus_pahari
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSMLUG00000011857	MRPL20	100	89.262	Myotis_lucifugus
MGP_SPRETEiJ_G0027898	Mrpl20	100	93.960	ENSNGAG00000021688	Mrpl20	100	93.960	Nannospalax_galili
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSNBRG00000006018	mrpl20	98	70.548	Neolamprologus_brichardi
MGP_SPRETEiJ_G0027898	Mrpl20	75	91.667	ENSNLEG00000013868	-	82	91.667	Nomascus_leucogenys
MGP_SPRETEiJ_G0027898	Mrpl20	100	91.275	ENSODEG00000010734	MRPL20	100	91.275	Octodon_degus
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.233	ENSONIG00000018914	mrpl20	98	71.233	Oreochromis_niloticus
MGP_SPRETEiJ_G0027898	Mrpl20	98	69.863	ENSORLG00000018304	mrpl20	98	69.863	Oryzias_latipes
MGP_SPRETEiJ_G0027898	Mrpl20	98	69.863	ENSORLG00020009128	mrpl20	98	69.863	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027898	Mrpl20	98	69.863	ENSORLG00015005156	mrpl20	98	69.863	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.233	ENSOMEG00000015654	mrpl20	98	71.233	Oryzias_melastigma
MGP_SPRETEiJ_G0027898	Mrpl20	100	91.946	ENSOGAG00000005968	MRPL20	100	91.946	Otolemur_garnettii
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSOARG00000003529	MRPL20	100	88.591	Ovis_aries
MGP_SPRETEiJ_G0027898	Mrpl20	100	87.919	ENSPPAG00000042350	-	100	87.919	Pan_paniscus
MGP_SPRETEiJ_G0027898	Mrpl20	99	92.517	ENSPPRG00000009188	MRPL20	99	92.517	Panthera_pardus
MGP_SPRETEiJ_G0027898	Mrpl20	79	92.135	ENSPTIG00000020769	MRPL20	98	92.135	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027898	Mrpl20	100	87.919	ENSPTRG00000000029	MRPL20	100	87.919	Pan_troglodytes
MGP_SPRETEiJ_G0027898	Mrpl20	100	88.591	ENSPANG00000015802	MRPL20	100	88.591	Papio_anubis
MGP_SPRETEiJ_G0027898	Mrpl20	94	75.714	ENSPANG00000036197	-	100	75.714	Papio_anubis
MGP_SPRETEiJ_G0027898	Mrpl20	100	66.443	ENSPKIG00000002248	mrpl20	100	66.443	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027898	Mrpl20	95	71.127	ENSPSIG00000003939	MRPL20	100	71.127	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027898	Mrpl20	97	74.194	ENSPMGG00000003966	mrpl20	98	71.918	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027898	Mrpl20	69	38.235	ENSPMGG00000022271	-	55	37.179	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	74.497	ENSPEMG00000009458	-	85	74.497	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027898	Mrpl20	71	39.706	ENSPMAG00000009990	-	75	40.000	Petromyzon_marinus
MGP_SPRETEiJ_G0027898	Mrpl20	100	81.208	ENSPCIG00000007747	MRPL20	100	81.208	Phascolarctos_cinereus
MGP_SPRETEiJ_G0027898	Mrpl20	98	68.493	ENSPFOG00000018163	mrpl20	99	68.493	Poecilia_formosa
MGP_SPRETEiJ_G0027898	Mrpl20	98	68.493	ENSPLAG00000016451	mrpl20	99	68.493	Poecilia_latipinna
MGP_SPRETEiJ_G0027898	Mrpl20	98	68.493	ENSPMEG00000002561	mrpl20	99	68.493	Poecilia_mexicana
MGP_SPRETEiJ_G0027898	Mrpl20	92	70.455	ENSPREG00000004925	mrpl20	99	63.946	Poecilia_reticulata
MGP_SPRETEiJ_G0027898	Mrpl20	99	90.541	ENSPCAG00000001425	MRPL20	99	90.541	Procavia_capensis
MGP_SPRETEiJ_G0027898	Mrpl20	99	81.081	ENSPCOG00000004450	-	99	81.081	Propithecus_coquereli
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.933	ENSPCOG00000025653	-	100	89.933	Propithecus_coquereli
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSPNYG00000008626	mrpl20	98	70.548	Pundamilia_nyererei
MGP_SPRETEiJ_G0027898	Mrpl20	99	66.667	ENSPNAG00000016694	mrpl20	99	66.667	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027898	Mrpl20	100	95.973	ENSRNOG00000018647	Mrpl20	100	95.973	Rattus_norvegicus
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSRBIG00000042278	MRPL20	100	89.262	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027898	Mrpl20	100	89.262	ENSRROG00000003574	MRPL20	100	89.262	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027898	Mrpl20	74	90.361	ENSSBOG00000035454	-	100	90.361	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027898	Mrpl20	97	78.495	ENSSHAG00000008197	MRPL20	100	70.323	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027898	Mrpl20	100	66.443	ENSSFOG00015016009	mrpl20	100	66.443	Scleropages_formosus
MGP_SPRETEiJ_G0027898	Mrpl20	98	71.918	ENSSMAG00000000214	mrpl20	98	71.918	Scophthalmus_maximus
MGP_SPRETEiJ_G0027898	Mrpl20	97	74.194	ENSSDUG00000008646	mrpl20	98	72.603	Seriola_dumerili
MGP_SPRETEiJ_G0027898	Mrpl20	97	74.194	ENSSLDG00000023171	mrpl20	98	72.603	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027898	Mrpl20	100	70.470	ENSSPUG00000016911	MRPL20	100	70.470	Sphenodon_punctatus
MGP_SPRETEiJ_G0027898	Mrpl20	99	74.737	ENSSPAG00000012887	mrpl20	98	71.233	Stegastes_partitus
MGP_SPRETEiJ_G0027898	Mrpl20	99	91.216	ENSSSCG00000033374	MRPL20	99	91.216	Sus_scrofa
MGP_SPRETEiJ_G0027898	Mrpl20	81	76.860	ENSTGUG00000003113	MRPL20	98	76.860	Taeniopygia_guttata
MGP_SPRETEiJ_G0027898	Mrpl20	97	72.043	ENSTRUG00000021410	mrpl20	97	68.966	Takifugu_rubripes
MGP_SPRETEiJ_G0027898	Mrpl20	100	70.470	ENSTNIG00000014657	mrpl20	100	70.470	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027898	Mrpl20	100	91.946	ENSTBEG00000008735	MRPL20	100	91.946	Tupaia_belangeri
MGP_SPRETEiJ_G0027898	Mrpl20	80	91.597	ENSTTRG00000017046	MRPL20	99	91.597	Tursiops_truncatus
MGP_SPRETEiJ_G0027898	Mrpl20	100	93.289	ENSUAMG00000012829	-	100	93.289	Ursus_americanus
MGP_SPRETEiJ_G0027898	Mrpl20	88	68.382	ENSUAMG00000028406	-	89	68.382	Ursus_americanus
MGP_SPRETEiJ_G0027898	Mrpl20	83	86.735	ENSUMAG00000001917	-	86	86.735	Ursus_maritimus
MGP_SPRETEiJ_G0027898	Mrpl20	88	68.382	ENSUMAG00000003240	-	89	68.382	Ursus_maritimus
MGP_SPRETEiJ_G0027898	Mrpl20	74	90.361	ENSVPAG00000001846	-	100	90.361	Vicugna_pacos
MGP_SPRETEiJ_G0027898	Mrpl20	100	92.617	ENSVVUG00000004455	MRPL20	100	92.617	Vulpes_vulpes
MGP_SPRETEiJ_G0027898	Mrpl20	100	73.154	ENSXETG00000011118	mrpl20	100	73.154	Xenopus_tropicalis
MGP_SPRETEiJ_G0027898	Mrpl20	98	67.808	ENSXCOG00000004220	mrpl20	99	67.808	Xiphophorus_couchianus
MGP_SPRETEiJ_G0027898	Mrpl20	98	67.808	ENSXMAG00000016652	mrpl20	99	67.808	Xiphophorus_maculatus