EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0027942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19877 bases
Position: chr5:2743408-2763284
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0069179	MMR_HSR1	PF01926.23	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0069185	-	924	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0069184	-	698	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0069178	-	1141	-	MGP_SPRETEiJ_P0069178	366 (aa)	-	-
MGP_SPRETEiJ_T0069179	-	731	-	MGP_SPRETEiJ_P0069179	227 (aa)	-	-
MGP_SPRETEiJ_T0069187	-	650	-	MGP_SPRETEiJ_P0069187	45 (aa)	-	-
MGP_SPRETEiJ_T0069186	-	687	-	MGP_SPRETEiJ_P0069186	76 (aa)	-	-
MGP_SPRETEiJ_T0069181	-	651	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0069180	-	2286	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0069183	-	529	-	MGP_SPRETEiJ_P0069183	77 (aa)	-	-
MGP_SPRETEiJ_T0069182	-	769	-	MGP_SPRETEiJ_P0069182	116 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0027942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0027942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSG00000105793	GTPBP10	99	84.689	Homo_sapiens
MGP_SPRETEiJ_G0027942	-	99	76.667	ENSAPOG00000024081	gtpbp10	97	68.802	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0027942	-	99	87.500	ENSAMEG00000011273	GTPBP10	94	80.601	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0027942	-	97	66.292	ENSACIG00000011274	gtpbp10	96	66.292	Amphilophus_citrinellus
MGP_SPRETEiJ_G0027942	-	81	77.670	ENSAOCG00000013674	gtpbp10	95	64.881	Amphiprion_ocellaris
MGP_SPRETEiJ_G0027942	-	99	76.667	ENSAPEG00000002756	gtpbp10	97	68.245	Amphiprion_percula
MGP_SPRETEiJ_G0027942	-	94	66.957	ENSATEG00000000187	gtpbp10	93	66.957	Anabas_testudineus
MGP_SPRETEiJ_G0027942	-	99	69.337	ENSAPLG00000006290	GTPBP10	99	69.337	Anas_platyrhynchos
MGP_SPRETEiJ_G0027942	-	98	65.181	ENSACAG00000015854	GTPBP10	98	65.181	Anolis_carolinensis
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSANAG00000020267	GTPBP10	94	81.644	Aotus_nancymaae
MGP_SPRETEiJ_G0027942	-	98	66.574	ENSACLG00000017490	gtpbp10	97	66.574	Astatotilapia_calliptera
MGP_SPRETEiJ_G0027942	-	99	75.000	ENSAMXG00000001853	gtpbp10	90	63.636	Astyanax_mexicanus
MGP_SPRETEiJ_G0027942	-	99	85.000	ENSBTAG00000032166	GTPBP10	95	80.601	Bos_taurus
MGP_SPRETEiJ_G0027942	-	85	47.619	WBGene00016145	C26E6.12	93	36.413	Caenorhabditis_elegans
MGP_SPRETEiJ_G0027942	-	99	90.000	ENSCJAG00000014212	GTPBP10	94	81.644	Callithrix_jacchus
MGP_SPRETEiJ_G0027942	-	99	85.833	ENSCAFG00000001882	GTPBP10	96	80.055	Canis_familiaris
MGP_SPRETEiJ_G0027942	-	99	85.833	ENSCAFG00020016274	GTPBP10	96	80.055	Canis_lupus_dingo
MGP_SPRETEiJ_G0027942	-	99	85.000	ENSCHIG00000019551	GTPBP10	95	80.601	Capra_hircus
MGP_SPRETEiJ_G0027942	-	100	88.333	ENSTSYG00000008399	GTPBP10	93	88.158	Carlito_syrichta
MGP_SPRETEiJ_G0027942	-	95	78.241	ENSCAPG00000005690	GTPBP10	98	89.231	Cavia_aperea
MGP_SPRETEiJ_G0027942	-	100	84.141	ENSCPOG00000003608	GTPBP10	98	84.211	Cavia_porcellus
MGP_SPRETEiJ_G0027942	-	99	90.000	ENSCCAG00000025362	GTPBP10	94	81.918	Cebus_capucinus
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSCATG00000012178	GTPBP10	94	82.466	Cercocebus_atys
MGP_SPRETEiJ_G0027942	-	100	85.022	ENSCLAG00000006695	GTPBP10	94	85.022	Chinchilla_lanigera
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSCSAG00000012493	GTPBP10	94	82.192	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0027942	-	97	80.791	ENSCHOG00000000392	GTPBP10	99	80.791	Choloepus_hoffmanni
MGP_SPRETEiJ_G0027942	-	95	58.621	ENSCING00000012641	-	98	52.857	Ciona_intestinalis
MGP_SPRETEiJ_G0027942	-	93	52.273	ENSCSAVG00000011258	-	85	57.812	Ciona_savignyi
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSCANG00000034809	GTPBP10	94	81.918	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0027942	-	99	95.798	ENSCGRG00001000101	Gtpbp10	99	90.789	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0027942	-	99	95.798	ENSCGRG00000003724	Gtpbp10	99	93.284	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0027942	-	95	66.185	ENSCSEG00000001830	gtpbp10	92	66.185	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0027942	-	98	66.017	ENSCVAG00000001795	gtpbp10	93	66.017	Cyprinodon_variegatus
MGP_SPRETEiJ_G0027942	-	99	62.259	ENSDARG00000040300	gtpbp10	96	62.259	Danio_rerio
MGP_SPRETEiJ_G0027942	-	99	84.167	ENSDNOG00000041099	GTPBP10	96	78.415	Dasypus_novemcinctus
MGP_SPRETEiJ_G0027942	-	100	74.449	ENSDORG00000015471	Gtpbp10	100	80.189	Dipodomys_ordii
MGP_SPRETEiJ_G0027942	-	85	61.386	FBgn0032818	CG10628	86	47.748	Drosophila_melanogaster
MGP_SPRETEiJ_G0027942	-	100	72.678	ENSETEG00000010827	GTPBP10	95	72.678	Echinops_telfairi
MGP_SPRETEiJ_G0027942	-	73	51.807	ENSEBUG00000011781	gtpbp10	93	64.602	Eptatretus_burgeri
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSEASG00005019630	GTPBP10	95	81.967	Equus_asinus_asinus
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSECAG00000017416	GTPBP10	95	82.240	Equus_caballus
MGP_SPRETEiJ_G0027942	-	92	84.466	ENSEEUG00000002135	GTPBP10	95	75.137	Erinaceus_europaeus
MGP_SPRETEiJ_G0027942	-	99	72.500	ENSELUG00000010662	gtpbp10	94	65.460	Esox_lucius
MGP_SPRETEiJ_G0027942	-	99	85.833	ENSFCAG00000019336	GTPBP10	93	85.526	Felis_catus
MGP_SPRETEiJ_G0027942	-	85	79.832	ENSFALG00000007709	GTPBP10	97	71.131	Ficedula_albicollis
MGP_SPRETEiJ_G0027942	-	100	83.260	ENSFDAG00000011617	GTPBP10	94	83.260	Fukomys_damarensis
MGP_SPRETEiJ_G0027942	-	98	67.131	ENSFHEG00000018435	gtpbp10	97	67.131	Fundulus_heteroclitus
MGP_SPRETEiJ_G0027942	-	95	66.379	ENSGMOG00000008039	gtpbp10	99	66.379	Gadus_morhua
MGP_SPRETEiJ_G0027942	-	100	74.016	ENSGALG00000009035	GTPBP10	94	70.225	Gallus_gallus
MGP_SPRETEiJ_G0027942	-	100	70.229	ENSGAFG00000015123	gtpbp10	93	65.738	Gambusia_affinis
MGP_SPRETEiJ_G0027942	-	100	64.758	ENSGACG00000012277	gtpbp10	100	69.737	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0027942	-	99	72.329	ENSGAGG00000021223	GTPBP10	99	72.329	Gopherus_agassizii
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSGGOG00000034985	GTPBP10	94	82.466	Gorilla_gorilla
MGP_SPRETEiJ_G0027942	-	98	66.295	ENSHBUG00000004852	gtpbp10	97	66.295	Haplochromis_burtoni
MGP_SPRETEiJ_G0027942	-	100	85.463	ENSHGLG00000014579	GTPBP10	99	86.842	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0027942	-	99	82.192	ENSHGLG00100013616	GTPBP10	94	82.192	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0027942	-	99	74.167	ENSHCOG00000007155	gtpbp10	99	61.749	Hippocampus_comes
MGP_SPRETEiJ_G0027942	-	99	63.085	ENSIPUG00000003080	gtpbp10	94	63.085	Ictalurus_punctatus
MGP_SPRETEiJ_G0027942	-	99	87.500	ENSSTOG00000008220	GTPBP10	99	85.821	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSJJAG00000020189	Gtpbp10	99	88.806	Jaculus_jaculus
MGP_SPRETEiJ_G0027942	-	100	63.661	ENSKMAG00000003426	gtpbp10	97	63.661	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0027942	-	100	63.934	ENSLBEG00000006127	gtpbp10	99	63.934	Labrus_bergylta
MGP_SPRETEiJ_G0027942	-	99	77.500	ENSLACG00000015237	GTPBP10	96	68.156	Latimeria_chalumnae
MGP_SPRETEiJ_G0027942	-	95	67.052	ENSLOCG00000010313	gtpbp10	93	67.052	Lepisosteus_oculatus
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSLAFG00000009945	GTPBP10	99	81.421	Loxodonta_africana
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSMFAG00000020045	GTPBP10	99	84.545	Macaca_fascicularis
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSMMUG00000023656	GTPBP10	94	82.740	Macaca_mulatta
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSMNEG00000044506	GTPBP10	94	82.740	Macaca_nemestrina
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSMLEG00000036303	GTPBP10	94	82.466	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0027942	-	95	65.607	ENSMAMG00000013099	gtpbp10	93	65.607	Mastacembelus_armatus
MGP_SPRETEiJ_G0027942	-	98	66.574	ENSMZEG00005022457	gtpbp10	97	66.574	Maylandia_zebra
MGP_SPRETEiJ_G0027942	-	71	71.042	ENSMGAG00000008512	GTPBP10	92	71.042	Meleagris_gallopavo
MGP_SPRETEiJ_G0027942	-	99	92.035	ENSMAUG00000012555	Gtpbp10	100	87.966	Mesocricetus_auratus
MGP_SPRETEiJ_G0027942	-	99	87.500	ENSMICG00000010172	GTPBP10	93	82.895	Microcebus_murinus
MGP_SPRETEiJ_G0027942	-	99	94.958	ENSMOCG00000017168	Gtpbp10	99	92.537	Microtus_ochrogaster
MGP_SPRETEiJ_G0027942	-	88	66.667	ENSMMOG00000003534	gtpbp10	93	66.667	Mola_mola
MGP_SPRETEiJ_G0027942	-	100	78.333	ENSMODG00000010453	GTPBP10	96	73.497	Monodelphis_domestica
MGP_SPRETEiJ_G0027942	-	98	64.624	ENSMALG00000002814	gtpbp10	87	64.624	Monopterus_albus
MGP_SPRETEiJ_G0027942	-	100	97.797	MGP_CAROLIEiJ_G0026947	Gtpbp10	100	97.797	Mus_caroli
MGP_SPRETEiJ_G0027942	-	100	98.907	ENSMUSG00000040464	Gtpbp10	100	98.907	Mus_musculus
MGP_SPRETEiJ_G0027942	-	100	96.476	MGP_PahariEiJ_G0021720	Gtpbp10	100	96.476	Mus_pahari
MGP_SPRETEiJ_G0027942	-	95	68.182	ENSMPUG00000018321	GTPBP10	96	68.182	Mustela_putorius_furo
MGP_SPRETEiJ_G0027942	-	99	84.906	ENSMLUG00000007418	-	95	79.781	Myotis_lucifugus
MGP_SPRETEiJ_G0027942	-	100	89.427	ENSNGAG00000013941	Gtpbp10	99	90.789	Nannospalax_galili
MGP_SPRETEiJ_G0027942	-	98	66.574	ENSNBRG00000006085	gtpbp10	97	66.574	Neolamprologus_brichardi
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSNLEG00000015162	GTPBP10	94	82.192	Nomascus_leucogenys
MGP_SPRETEiJ_G0027942	-	95	77.500	ENSMEUG00000005934	GTPBP10	96	69.492	Notamacropus_eugenii
MGP_SPRETEiJ_G0027942	-	99	86.667	ENSOPRG00000012366	GTPBP10	95	73.224	Ochotona_princeps
MGP_SPRETEiJ_G0027942	-	100	84.581	ENSODEG00000000522	GTPBP10	100	84.337	Octodon_degus
MGP_SPRETEiJ_G0027942	-	98	66.852	ENSONIG00000006196	gtpbp10	98	66.852	Oreochromis_niloticus
MGP_SPRETEiJ_G0027942	-	53	76.860	ENSOANG00000014455	-	86	65.789	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0027942	-	99	85.000	ENSOCUG00000014847	GTPBP10	92	81.148	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0027942	-	98	66.667	ENSORLG00000009408	gtpbp10	83	66.667	Oryzias_latipes
MGP_SPRETEiJ_G0027942	-	98	66.667	ENSORLG00020011083	gtpbp10	93	66.667	Oryzias_latipes_hni
MGP_SPRETEiJ_G0027942	-	98	66.389	ENSORLG00015000477	gtpbp10	99	66.389	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0027942	-	98	68.245	ENSOMEG00000005980	gtpbp10	96	68.946	Oryzias_melastigma
MGP_SPRETEiJ_G0027942	-	99	85.833	ENSOGAG00000010568	GTPBP10	84	85.667	Otolemur_garnettii
MGP_SPRETEiJ_G0027942	-	99	85.833	ENSOARG00000012311	-	95	80.926	Ovis_aries
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSPPAG00000027408	GTPBP10	94	82.192	Pan_paniscus
MGP_SPRETEiJ_G0027942	-	99	85.000	ENSPPRG00000005403	-	93	85.526	Panthera_pardus
MGP_SPRETEiJ_G0027942	-	99	85.000	ENSPTIG00000003183	-	93	85.526	Panthera_tigris_altaica
MGP_SPRETEiJ_G0027942	-	97	78.310	ENSPTRG00000048897	-	94	78.310	Pan_troglodytes
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSPTRG00000019384	GTPBP10	94	82.192	Pan_troglodytes
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSPANG00000005830	GTPBP10	93	84.211	Papio_anubis
MGP_SPRETEiJ_G0027942	-	98	77.586	ENSPKIG00000000352	gtpbp10	95	64.345	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0027942	-	90	72.036	ENSPSIG00000014996	GTPBP10	99	69.714	Pelodiscus_sinensis
MGP_SPRETEiJ_G0027942	-	92	70.992	ENSPMGG00000021473	gtpbp10	88	65.749	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0027942	-	99	93.277	ENSPEMG00000009263	Gtpbp10	99	93.421	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0027942	-	93	63.333	ENSPMAG00000004034	gtpbp10	85	58.182	Petromyzon_marinus
MGP_SPRETEiJ_G0027942	-	100	63.315	ENSPFOG00000016036	gtpbp10	94	63.315	Poecilia_formosa
MGP_SPRETEiJ_G0027942	-	100	63.661	ENSPLAG00000011156	gtpbp10	94	63.661	Poecilia_latipinna
MGP_SPRETEiJ_G0027942	-	100	63.661	ENSPMEG00000011148	gtpbp10	94	63.661	Poecilia_mexicana
MGP_SPRETEiJ_G0027942	-	98	64.903	ENSPREG00000016393	gtpbp10	92	64.903	Poecilia_reticulata
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSPPYG00000017830	GTPBP10	94	81.370	Pongo_abelii
MGP_SPRETEiJ_G0027942	-	78	85.135	ENSPCAG00000015928	GTPBP10	76	85.135	Procavia_capensis
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSPCOG00000017700	GTPBP10	93	86.842	Propithecus_coquereli
MGP_SPRETEiJ_G0027942	-	99	80.189	ENSPVAG00000015211	GTPBP10	95	75.410	Pteropus_vampyrus
MGP_SPRETEiJ_G0027942	-	98	66.852	ENSPNYG00000006017	gtpbp10	97	66.852	Pundamilia_nyererei
MGP_SPRETEiJ_G0027942	-	99	65.014	ENSPNAG00000004156	gtpbp10	95	65.014	Pygocentrus_nattereri
MGP_SPRETEiJ_G0027942	-	99	92.329	ENSRNOG00000007098	Gtpbp10	99	92.329	Rattus_norvegicus
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSRBIG00000020878	GTPBP10	94	81.918	Rhinopithecus_bieti
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSRROG00000045602	GTPBP10	94	81.918	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0027942	-	99	89.167	ENSSBOG00000034053	GTPBP10	94	81.370	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0027942	-	98	72.067	ENSSHAG00000017517	GTPBP10	93	72.067	Sarcophilus_harrisii
MGP_SPRETEiJ_G0027942	-	89	74.167	ENSSFOG00015011125	gtpbp10	79	64.082	Scleropages_formosus
MGP_SPRETEiJ_G0027942	-	98	65.181	ENSSMAG00000017843	gtpbp10	98	65.181	Scophthalmus_maximus
MGP_SPRETEiJ_G0027942	-	98	66.017	ENSSDUG00000002032	gtpbp10	97	66.017	Seriola_dumerili
MGP_SPRETEiJ_G0027942	-	98	65.738	ENSSLDG00000015773	gtpbp10	97	65.738	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0027942	-	99	69.041	ENSSPUG00000014574	GTPBP10	98	69.041	Sphenodon_punctatus
MGP_SPRETEiJ_G0027942	-	100	68.702	ENSSPAG00000003435	gtpbp10	98	64.903	Stegastes_partitus
MGP_SPRETEiJ_G0027942	-	99	90.000	ENSSSCG00000015305	-	95	82.514	Sus_scrofa
MGP_SPRETEiJ_G0027942	-	99	70.685	ENSTGUG00000001430	GTPBP10	99	70.685	Taeniopygia_guttata
MGP_SPRETEiJ_G0027942	-	94	66.087	ENSTRUG00000021373	gtpbp10	93	66.087	Takifugu_rubripes
MGP_SPRETEiJ_G0027942	-	100	63.889	ENSTNIG00000018351	gtpbp10	94	58.501	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0027942	-	95	88.333	ENSTBEG00000011567	GTPBP10	94	70.986	Tupaia_belangeri
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSUAMG00000006921	GTPBP10	96	81.694	Ursus_americanus
MGP_SPRETEiJ_G0027942	-	99	88.333	ENSUMAG00000018594	GTPBP10	96	81.694	Ursus_maritimus
MGP_SPRETEiJ_G0027942	-	99	84.167	ENSVPAG00000004945	GTPBP10	95	79.508	Vicugna_pacos
MGP_SPRETEiJ_G0027942	-	80	79.725	ENSVVUG00000013675	-	90	79.725	Vulpes_vulpes
MGP_SPRETEiJ_G0027942	-	98	74.790	ENSXETG00000007436	gtpbp10	96	63.388	Xenopus_tropicalis
MGP_SPRETEiJ_G0027942	-	98	64.903	ENSXCOG00000019599	gtpbp10	93	64.903	Xiphophorus_couchianus
MGP_SPRETEiJ_G0027942	-	98	65.181	ENSXMAG00000006881	gtpbp10	93	65.181	Xiphophorus_maculatus