EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028039 (Gene tree)
Gene ID: -
Gene Symbol: Nom1
Alias: D5Kng1|Gm1040|LOC381627
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 24787 bases
Position: chr5:26396675-26421461
Accession: 1861749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0069719	MA3	PF02847.17	2.5e-23	1	1
MGP_SPRETEiJ_P0069719	MIF4G	PF02854.19	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0069719	-	7993	-	MGP_SPRETEiJ_P0069719	856 (aa)	-	-
MGP_SPRETEiJ_T0069720	-	531	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028039	Nom1	95	71.243	ENSG00000146909	NOM1	97	73.934	Homo_sapiens
MGP_SPRETEiJ_G0028039	Nom1	61	67.245	ENSAPOG00000012073	nom1	97	53.176	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028039	Nom1	82	70.950	ENSAMEG00000001412	NOM1	99	70.810	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028039	Nom1	83	67.630	ENSACIG00000018050	nom1	99	53.166	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028039	Nom1	61	66.089	ENSAOCG00000006229	nom1	97	52.751	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028039	Nom1	61	66.281	ENSAPEG00000015994	nom1	98	52.679	Amphiprion_percula
MGP_SPRETEiJ_G0028039	Nom1	83	56.948	ENSATEG00000005405	nom1	97	53.724	Anabas_testudineus
MGP_SPRETEiJ_G0028039	Nom1	76	63.859	ENSAPLG00000006585	NOM1	99	62.519	Anas_platyrhynchos
MGP_SPRETEiJ_G0028039	Nom1	67	66.667	ENSACAG00000011192	NOM1	70	65.167	Anolis_carolinensis
MGP_SPRETEiJ_G0028039	Nom1	94	52.738	ENSACLG00000000033	nom1	97	53.325	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028039	Nom1	62	62.453	ENSAMXG00000041486	nom1	98	48.106	Astyanax_mexicanus
MGP_SPRETEiJ_G0028039	Nom1	95	63.691	ENSBTAG00000016435	NOM1	97	63.754	Bos_taurus
MGP_SPRETEiJ_G0028039	Nom1	95	70.468	ENSCJAG00000004336	NOM1	97	71.462	Callithrix_jacchus
MGP_SPRETEiJ_G0028039	Nom1	95	68.383	ENSCAFG00020005121	NOM1	97	67.958	Canis_lupus_dingo
MGP_SPRETEiJ_G0028039	Nom1	90	64.475	ENSCHIG00000020102	NOM1	96	64.320	Capra_hircus
MGP_SPRETEiJ_G0028039	Nom1	95	72.583	ENSTSYG00000000227	NOM1	97	71.976	Carlito_syrichta
MGP_SPRETEiJ_G0028039	Nom1	61	83.174	ENSCAPG00000016273	NOM1	100	83.174	Cavia_aperea
MGP_SPRETEiJ_G0028039	Nom1	95	69.016	ENSCPOG00000025538	NOM1	98	67.497	Cavia_porcellus
MGP_SPRETEiJ_G0028039	Nom1	95	55.755	ENSCCAG00000014944	NOM1	100	83.146	Cebus_capucinus
MGP_SPRETEiJ_G0028039	Nom1	82	72.301	ENSCLAG00000000267	NOM1	85	71.841	Chinchilla_lanigera
MGP_SPRETEiJ_G0028039	Nom1	70	73.410	ENSCPBG00000018215	NOM1	90	57.952	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028039	Nom1	82	35.190	ENSCING00000005248	-	98	34.783	Ciona_intestinalis
MGP_SPRETEiJ_G0028039	Nom1	69	77.627	ENSCANG00000041984	NOM1	99	77.627	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028039	Nom1	95	80.194	ENSCGRG00001020293	Nom1	97	80.479	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028039	Nom1	62	90.602	ENSCGRG00000005405	Nom1	100	90.602	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028039	Nom1	91	51.020	ENSCSEG00000000932	nom1	94	53.157	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028039	Nom1	94	52.983	ENSCVAG00000007562	nom1	97	52.751	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028039	Nom1	95	52.638	ENSDARG00000060027	nom1	99	65.489	Danio_rerio
MGP_SPRETEiJ_G0028039	Nom1	80	65.123	ENSDORG00000015682	Nom1	100	65.991	Dipodomys_ordii
MGP_SPRETEiJ_G0028039	Nom1	58	38.703	FBgn0035336	CG9004	79	35.493	Drosophila_melanogaster
MGP_SPRETEiJ_G0028039	Nom1	97	55.781	ENSETEG00000003104	NOM1	98	56.310	Echinops_telfairi
MGP_SPRETEiJ_G0028039	Nom1	50	50.812	ENSEBUG00000010077	nom1	95	50.812	Eptatretus_burgeri
MGP_SPRETEiJ_G0028039	Nom1	81	75.431	ENSEASG00005001489	NOM1	96	70.322	Equus_asinus_asinus
MGP_SPRETEiJ_G0028039	Nom1	95	69.056	ENSECAG00000007596	NOM1	91	69.017	Equus_caballus
MGP_SPRETEiJ_G0028039	Nom1	61	66.284	ENSELUG00000006266	nom1	98	51.594	Esox_lucius
MGP_SPRETEiJ_G0028039	Nom1	95	66.627	ENSFCAG00000006467	NOM1	97	67.574	Felis_catus
MGP_SPRETEiJ_G0028039	Nom1	79	61.748	ENSFALG00000006904	NOM1	99	62.607	Ficedula_albicollis
MGP_SPRETEiJ_G0028039	Nom1	95	70.545	ENSFDAG00000016241	NOM1	98	69.928	Fukomys_damarensis
MGP_SPRETEiJ_G0028039	Nom1	94	53.519	ENSFHEG00000015974	nom1	97	53.220	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028039	Nom1	79	53.725	ENSGMOG00000005129	nom1	99	50.939	Gadus_morhua
MGP_SPRETEiJ_G0028039	Nom1	97	55.671	ENSGALG00000006437	NOM1	93	56.075	Gallus_gallus
MGP_SPRETEiJ_G0028039	Nom1	62	64.312	ENSGAFG00000003211	nom1	97	53.212	Gambusia_affinis
MGP_SPRETEiJ_G0028039	Nom1	95	59.052	ENSGAGG00000014347	NOM1	98	58.922	Gopherus_agassizii
MGP_SPRETEiJ_G0028039	Nom1	95	72.869	ENSGGOG00000010920	NOM1	90	74.026	Gorilla_gorilla
MGP_SPRETEiJ_G0028039	Nom1	94	52.934	ENSHBUG00000014616	nom1	97	52.190	Haplochromis_burtoni
MGP_SPRETEiJ_G0028039	Nom1	96	70.340	ENSHGLG00000007392	NOM1	97	69.565	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028039	Nom1	83	85.127	ENSHGLG00100014407	NOM1	97	85.127	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028039	Nom1	63	61.296	ENSIPUG00000013980	nom1	98	49.763	Ictalurus_punctatus
MGP_SPRETEiJ_G0028039	Nom1	66	82.807	ENSSTOG00000031736	NOM1	99	82.807	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028039	Nom1	57	88.753	ENSJJAG00000011716	Nom1	99	88.753	Jaculus_jaculus
MGP_SPRETEiJ_G0028039	Nom1	61	66.346	ENSLBEG00000009252	nom1	97	51.051	Labrus_bergylta
MGP_SPRETEiJ_G0028039	Nom1	84	57.507	ENSLACG00000011777	NOM1	98	54.191	Latimeria_chalumnae
MGP_SPRETEiJ_G0028039	Nom1	96	52.880	ENSLOCG00000012452	nom1	99	53.528	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028039	Nom1	95	63.845	ENSLAFG00000007119	NOM1	100	61.602	Loxodonta_africana
MGP_SPRETEiJ_G0028039	Nom1	95	69.498	ENSMMUG00000039033	NOM1	97	69.504	Macaca_mulatta
MGP_SPRETEiJ_G0028039	Nom1	62	84.470	ENSMLEG00000037062	NOM1	99	84.470	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028039	Nom1	94	51.874	ENSMAMG00000004118	nom1	97	51.371	Mastacembelus_armatus
MGP_SPRETEiJ_G0028039	Nom1	94	52.738	ENSMZEG00005000384	nom1	97	53.325	Maylandia_zebra
MGP_SPRETEiJ_G0028039	Nom1	80	62.841	ENSMGAG00000005051	NOM1	99	63.333	Meleagris_gallopavo
MGP_SPRETEiJ_G0028039	Nom1	100	79.045	ENSMAUG00000017988	Nom1	100	79.744	Mesocricetus_auratus
MGP_SPRETEiJ_G0028039	Nom1	95	70.280	ENSMICG00000017531	NOM1	98	71.140	Microcebus_murinus
MGP_SPRETEiJ_G0028039	Nom1	99	80.819	ENSMOCG00000015962	Nom1	99	81.637	Microtus_ochrogaster
MGP_SPRETEiJ_G0028039	Nom1	94	50.181	ENSMMOG00000004419	nom1	96	50.663	Mola_mola
MGP_SPRETEiJ_G0028039	Nom1	96	63.011	ENSMODG00000005177	NOM1	99	63.785	Monodelphis_domestica
MGP_SPRETEiJ_G0028039	Nom1	89	52.207	ENSMALG00000008800	nom1	97	51.894	Monopterus_albus
MGP_SPRETEiJ_G0028039	Nom1	100	96.846	MGP_CAROLIEiJ_G0027043	Nom1	100	96.846	Mus_caroli
MGP_SPRETEiJ_G0028039	Nom1	100	99.182	ENSMUSG00000001569	Nom1	100	99.182	Mus_musculus
MGP_SPRETEiJ_G0028039	Nom1	79	68.567	ENSMPUG00000009745	NOM1	100	68.831	Mustela_putorius_furo
MGP_SPRETEiJ_G0028039	Nom1	69	73.658	ENSMLUG00000009129	NOM1	99	73.658	Myotis_lucifugus
MGP_SPRETEiJ_G0028039	Nom1	94	53.995	ENSNBRG00000016429	nom1	93	67.052	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028039	Nom1	95	69.647	ENSNLEG00000000238	NOM1	97	70.789	Nomascus_leucogenys
MGP_SPRETEiJ_G0028039	Nom1	85	64.286	ENSMEUG00000001108	NOM1	87	64.286	Notamacropus_eugenii
MGP_SPRETEiJ_G0028039	Nom1	85	61.594	ENSOPRG00000014676	NOM1	86	61.594	Ochotona_princeps
MGP_SPRETEiJ_G0028039	Nom1	81	75.571	ENSODEG00000009399	NOM1	100	75.000	Octodon_degus
MGP_SPRETEiJ_G0028039	Nom1	82	56.088	ENSONIG00000005958	nom1	99	53.759	Oreochromis_niloticus
MGP_SPRETEiJ_G0028039	Nom1	54	76.522	ENSOANG00000006139	-	97	76.522	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028039	Nom1	92	61.055	ENSOCUG00000021448	-	100	60.804	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028039	Nom1	95	72.310	ENSOCUG00000004071	-	98	72.813	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028039	Nom1	93	52.038	ENSORLG00000010541	nom1	98	51.976	Oryzias_latipes
MGP_SPRETEiJ_G0028039	Nom1	78	56.729	ENSORLG00020010789	nom1	94	55.708	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028039	Nom1	93	51.741	ENSORLG00015010475	nom1	98	51.909	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028039	Nom1	59	66.208	ENSOMEG00000004219	nom1	97	52.278	Oryzias_melastigma
MGP_SPRETEiJ_G0028039	Nom1	68	77.720	ENSOGAG00000001124	NOM1	100	75.410	Otolemur_garnettii
MGP_SPRETEiJ_G0028039	Nom1	85	66.038	ENSOARG00000007261	NOM1	98	67.260	Ovis_aries
MGP_SPRETEiJ_G0028039	Nom1	95	71.804	ENSPPAG00000041374	NOM1	97	73.790	Pan_paniscus
MGP_SPRETEiJ_G0028039	Nom1	82	69.571	ENSPTIG00000013532	NOM1	98	71.508	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028039	Nom1	95	71.924	ENSPTRG00000019917	NOM1	97	74.026	Pan_troglodytes
MGP_SPRETEiJ_G0028039	Nom1	95	71.462	ENSPANG00000007605	NOM1	97	72.491	Papio_anubis
MGP_SPRETEiJ_G0028039	Nom1	95	50.831	ENSPKIG00000005825	nom1	98	50.535	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028039	Nom1	65	71.532	ENSPSIG00000017848	NOM1	97	68.465	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028039	Nom1	86	55.749	ENSPMGG00000002577	nom1	97	53.724	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028039	Nom1	100	82.831	ENSPEMG00000024180	Nom1	100	83.063	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028039	Nom1	96	61.889	ENSPCIG00000027941	NOM1	95	61.599	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028039	Nom1	61	66.667	ENSPFOG00000015771	nom1	98	52.745	Poecilia_formosa
MGP_SPRETEiJ_G0028039	Nom1	61	66.667	ENSPLAG00000007856	nom1	97	53.837	Poecilia_latipinna
MGP_SPRETEiJ_G0028039	Nom1	94	52.518	ENSPMEG00000014155	nom1	98	53.181	Poecilia_mexicana
MGP_SPRETEiJ_G0028039	Nom1	94	52.899	ENSPREG00000008850	nom1	97	52.432	Poecilia_reticulata
MGP_SPRETEiJ_G0028039	Nom1	95	67.909	ENSPPYG00000018222	NOM1	96	69.524	Pongo_abelii
MGP_SPRETEiJ_G0028039	Nom1	77	72.261	ENSPCAG00000000440	NOM1	97	58.015	Procavia_capensis
MGP_SPRETEiJ_G0028039	Nom1	62	81.818	ENSPCOG00000015222	NOM1	99	81.818	Propithecus_coquereli
MGP_SPRETEiJ_G0028039	Nom1	95	66.827	ENSPVAG00000014760	NOM1	98	67.217	Pteropus_vampyrus
MGP_SPRETEiJ_G0028039	Nom1	94	52.262	ENSPNYG00000006975	nom1	97	64.444	Pundamilia_nyererei
MGP_SPRETEiJ_G0028039	Nom1	63	60.781	ENSPNAG00000011085	nom1	82	52.285	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028039	Nom1	95	85.504	ENSRNOG00000048969	AABR07059041.1	100	85.504	Rattus_norvegicus
MGP_SPRETEiJ_G0028039	Nom1	95	72.695	ENSRBIG00000037042	NOM1	97	72.393	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028039	Nom1	95	72.455	ENSRROG00000037293	NOM1	97	72.156	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028039	Nom1	79	70.925	ENSSHAG00000017998	-	100	71.821	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028039	Nom1	56	62.708	ENSSFOG00015003196	nom1	99	62.708	Scleropages_formosus
MGP_SPRETEiJ_G0028039	Nom1	94	52.148	ENSSMAG00000011047	nom1	98	52.189	Scophthalmus_maximus
MGP_SPRETEiJ_G0028039	Nom1	94	52.600	ENSSDUG00000006834	nom1	97	52.688	Seriola_dumerili
MGP_SPRETEiJ_G0028039	Nom1	94	52.850	ENSSLDG00000021812	nom1	97	52.189	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028039	Nom1	81	55.972	ENSSPUG00000002556	NOM1	86	78.689	Sphenodon_punctatus
MGP_SPRETEiJ_G0028039	Nom1	82	61.073	ENSTGUG00000000702	-	99	62.143	Taeniopygia_guttata
MGP_SPRETEiJ_G0028039	Nom1	84	53.298	ENSTRUG00000010239	nom1	97	52.714	Takifugu_rubripes
MGP_SPRETEiJ_G0028039	Nom1	94	51.322	ENSTNIG00000012783	nom1	99	52.130	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028039	Nom1	96	65.335	ENSTTRG00000009691	NOM1	99	66.237	Tursiops_truncatus
MGP_SPRETEiJ_G0028039	Nom1	95	65.885	ENSUAMG00000025450	NOM1	97	67.335	Ursus_americanus
MGP_SPRETEiJ_G0028039	Nom1	83	71.650	ENSUMAG00000014275	NOM1	100	71.650	Ursus_maritimus
MGP_SPRETEiJ_G0028039	Nom1	95	67.223	ENSVVUG00000002608	NOM1	97	67.938	Vulpes_vulpes
MGP_SPRETEiJ_G0028039	Nom1	96	52.669	ENSXETG00000021611	nom1	94	69.362	Xenopus_tropicalis
MGP_SPRETEiJ_G0028039	Nom1	94	53.893	ENSXMAG00000002451	nom1	97	54.192	Xiphophorus_maculatus