EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028091 (Gene tree)
Gene ID: -
Gene Symbol: Gpn1
Alias: 2410004J02Rik|Xab1
Full Name: GPN-loop GTPase 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 19352 bases
Position: chr5:28678420-28697771
Accession: 1921504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0070038	GTP_EFTU	PF00009.27	4.7e-08	1	1
MGP_SPRETEiJ_P0070038	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0070039	-	4387	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0070038	-	3083	-	MGP_SPRETEiJ_P0070038	372 (aa)	-	-
MGP_SPRETEiJ_T0070042	-	373	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0070043	-	640	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0070040	-	395	-	MGP_SPRETEiJ_P0070040	85 (aa)	-	-
MGP_SPRETEiJ_T0070041	-	643	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028091	Gpn1	98	91.209	ENSG00000198522	GPN1	99	91.809	Homo_sapiens
MGP_SPRETEiJ_G0028091	Gpn1	99	90.591	ENSAMEG00000001201	GPN1	96	90.591	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028091	Gpn1	92	72.965	ENSAPEG00000000067	gpn1	90	68.750	Amphiprion_percula
MGP_SPRETEiJ_G0028091	Gpn1	95	77.809	ENSAPEG00000000050	gpn1	89	77.809	Amphiprion_percula
MGP_SPRETEiJ_G0028091	Gpn1	97	79.006	ENSATEG00000015542	gpn1	94	78.889	Anabas_testudineus
MGP_SPRETEiJ_G0028091	Gpn1	92	79.651	ENSAPLG00000003530	GPN1	98	79.651	Anas_platyrhynchos
MGP_SPRETEiJ_G0028091	Gpn1	89	74.260	ENSACAG00000008974	GPN1	99	75.444	Anolis_carolinensis
MGP_SPRETEiJ_G0028091	Gpn1	99	90.054	ENSANAG00000024716	GPN1	96	90.054	Aotus_nancymaae
MGP_SPRETEiJ_G0028091	Gpn1	98	77.808	ENSACLG00000025644	gpn1	91	77.260	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028091	Gpn1	95	80.282	ENSAMXG00000031098	gpn1	87	80.282	Astyanax_mexicanus
MGP_SPRETEiJ_G0028091	Gpn1	73	60.727	WBGene00001661	gop-2	72	62.257	Caenorhabditis_elegans
MGP_SPRETEiJ_G0028091	Gpn1	97	90.833	ENSCJAG00000046633	GPN1	96	90.591	Callithrix_jacchus
MGP_SPRETEiJ_G0028091	Gpn1	97	91.389	ENSCAFG00000005160	-	95	90.323	Canis_familiaris
MGP_SPRETEiJ_G0028091	Gpn1	54	94.000	ENSCAFG00000032406	-	97	90.865	Canis_familiaris
MGP_SPRETEiJ_G0028091	Gpn1	73	80.952	ENSCAFG00000024379	-	98	80.586	Canis_familiaris
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSCAFG00020020326	-	99	90.054	Canis_lupus_dingo
MGP_SPRETEiJ_G0028091	Gpn1	97	90.833	ENSCAFG00020022034	-	99	89.785	Canis_lupus_dingo
MGP_SPRETEiJ_G0028091	Gpn1	99	84.140	ENSCHIG00000017789	-	99	84.140	Capra_hircus
MGP_SPRETEiJ_G0028091	Gpn1	99	88.978	ENSTSYG00000006604	GPN1	99	88.978	Carlito_syrichta
MGP_SPRETEiJ_G0028091	Gpn1	78	90.136	ENSCAPG00000015026	GPN1	90	90.136	Cavia_aperea
MGP_SPRETEiJ_G0028091	Gpn1	100	88.740	ENSCPOG00000004359	GPN1	100	88.740	Cavia_porcellus
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSCCAG00000035409	GPN1	96	90.591	Cebus_capucinus
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSCATG00000042260	GPN1	96	90.860	Cercocebus_atys
MGP_SPRETEiJ_G0028091	Gpn1	100	89.544	ENSCLAG00000008226	GPN1	99	89.544	Chinchilla_lanigera
MGP_SPRETEiJ_G0028091	Gpn1	97	90.833	ENSCSAG00000010222	GPN1	96	90.323	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028091	Gpn1	97	81.215	ENSCPBG00000009367	GPN1	99	80.000	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028091	Gpn1	72	67.778	ENSCING00000023847	-	85	67.778	Ciona_intestinalis
MGP_SPRETEiJ_G0028091	Gpn1	73	67.279	ENSCSAVG00000004925	-	95	64.211	Ciona_savignyi
MGP_SPRETEiJ_G0028091	Gpn1	97	90.556	ENSCANG00000031249	GPN1	99	90.785	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028091	Gpn1	100	93.834	ENSCGRG00001017621	Gpn1	100	93.834	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028091	Gpn1	100	93.834	ENSCGRG00000003560	Gpn1	100	93.834	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028091	Gpn1	93	73.043	ENSCSEG00000019468	gpn1	87	73.043	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028091	Gpn1	98	78.788	ENSDARG00000043928	gpn1	90	78.788	Danio_rerio
MGP_SPRETEiJ_G0028091	Gpn1	99	90.323	ENSDORG00000006558	Gpn1	99	90.323	Dipodomys_ordii
MGP_SPRETEiJ_G0028091	Gpn1	83	53.651	FBgn0040346	CG3704	65	60.484	Drosophila_melanogaster
MGP_SPRETEiJ_G0028091	Gpn1	97	90.833	ENSEASG00005009082	GPN1	99	90.591	Equus_asinus_asinus
MGP_SPRETEiJ_G0028091	Gpn1	97	85.000	ENSECAG00000009579	GPN1	99	84.946	Equus_caballus
MGP_SPRETEiJ_G0028091	Gpn1	98	91.209	ENSEEUG00000013421	GPN1	99	89.894	Erinaceus_europaeus
MGP_SPRETEiJ_G0028091	Gpn1	97	76.177	ENSELUG00000006293	gpn1	90	75.623	Esox_lucius
MGP_SPRETEiJ_G0028091	Gpn1	91	90.855	ENSFCAG00000030425	GPN1	99	91.809	Felis_catus
MGP_SPRETEiJ_G0028091	Gpn1	87	80.923	ENSFALG00000011331	GPN1	96	80.923	Ficedula_albicollis
MGP_SPRETEiJ_G0028091	Gpn1	100	88.472	ENSFDAG00000014526	GPN1	99	88.472	Fukomys_damarensis
MGP_SPRETEiJ_G0028091	Gpn1	94	78.286	ENSGMOG00000016174	gpn1	98	78.286	Gadus_morhua
MGP_SPRETEiJ_G0028091	Gpn1	95	80.791	ENSGALG00000016505	GPN1	98	79.778	Gallus_gallus
MGP_SPRETEiJ_G0028091	Gpn1	98	74.801	ENSGAFG00000016670	gpn1	79	74.005	Gambusia_affinis
MGP_SPRETEiJ_G0028091	Gpn1	94	78.857	ENSGACG00000017639	gpn1	96	80.734	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028091	Gpn1	97	81.768	ENSGAGG00000016449	GPN1	99	80.214	Gopherus_agassizii
MGP_SPRETEiJ_G0028091	Gpn1	98	91.209	ENSGGOG00000015285	GPN1	96	90.591	Gorilla_gorilla
MGP_SPRETEiJ_G0028091	Gpn1	98	77.534	ENSHBUG00000022933	gpn1	91	76.986	Haplochromis_burtoni
MGP_SPRETEiJ_G0028091	Gpn1	99	86.828	ENSHGLG00000010319	GPN1	99	86.828	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028091	Gpn1	99	86.828	ENSHGLG00100016905	GPN1	99	86.828	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028091	Gpn1	96	79.109	ENSIPUG00000011938	gpn1	90	79.109	Ictalurus_punctatus
MGP_SPRETEiJ_G0028091	Gpn1	100	90.617	ENSSTOG00000006379	-	100	90.617	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028091	Gpn1	97	75.487	ENSKMAG00000011063	gpn1	92	75.487	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028091	Gpn1	62	87.826	ENSLACG00000001268	GPN1	98	88.053	Latimeria_chalumnae
MGP_SPRETEiJ_G0028091	Gpn1	97	79.109	ENSLOCG00000015949	gpn1	87	82.201	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028091	Gpn1	99	90.323	ENSLAFG00000011179	GPN1	99	90.323	Loxodonta_africana
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSMFAG00000035863	GPN1	96	90.860	Macaca_fascicularis
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSMMUG00000019745	GPN1	96	90.860	Macaca_mulatta
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSMNEG00000027876	GPN1	96	90.860	Macaca_nemestrina
MGP_SPRETEiJ_G0028091	Gpn1	97	85.000	ENSMLEG00000031376	GPN1	96	81.183	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028091	Gpn1	98	77.808	ENSMZEG00005003265	gpn1	91	77.260	Maylandia_zebra
MGP_SPRETEiJ_G0028091	Gpn1	83	81.290	ENSMGAG00000014062	GPN1	98	81.290	Meleagris_gallopavo
MGP_SPRETEiJ_G0028091	Gpn1	97	93.906	ENSMAUG00000018225	Gpn1	100	93.566	Mesocricetus_auratus
MGP_SPRETEiJ_G0028091	Gpn1	99	90.323	ENSMICG00000042626	GPN1	99	90.323	Microcebus_murinus
MGP_SPRETEiJ_G0028091	Gpn1	97	94.183	ENSMOCG00000021769	Gpn1	100	93.566	Microtus_ochrogaster
MGP_SPRETEiJ_G0028091	Gpn1	94	78.873	ENSMMOG00000002005	gpn1	71	78.310	Mola_mola
MGP_SPRETEiJ_G0028091	Gpn1	95	86.441	ENSMODG00000015592	GPN1	98	84.553	Monodelphis_domestica
MGP_SPRETEiJ_G0028091	Gpn1	97	78.689	ENSMALG00000015121	gpn1	84	77.596	Monopterus_albus
MGP_SPRETEiJ_G0028091	Gpn1	100	97.581	MGP_CAROLIEiJ_G0027095	Gpn1	100	97.581	Mus_caroli
MGP_SPRETEiJ_G0028091	Gpn1	100	98.656	ENSMUSG00000064037	Gpn1	100	98.656	Mus_musculus
MGP_SPRETEiJ_G0028091	Gpn1	93	96.243	MGP_PahariEiJ_G0029286	Gpn1	96	96.243	Mus_pahari
MGP_SPRETEiJ_G0028091	Gpn1	97	90.305	ENSMLUG00000011928	GPN1	97	90.080	Myotis_lucifugus
MGP_SPRETEiJ_G0028091	Gpn1	98	91.484	ENSNLEG00000003945	GPN1	99	91.809	Nomascus_leucogenys
MGP_SPRETEiJ_G0028091	Gpn1	98	90.934	ENSOPRG00000013015	GPN1	99	90.323	Ochotona_princeps
MGP_SPRETEiJ_G0028091	Gpn1	100	88.472	ENSODEG00000007092	GPN1	99	88.472	Octodon_degus
MGP_SPRETEiJ_G0028091	Gpn1	97	77.989	ENSONIG00000003361	gpn1	93	76.630	Oreochromis_niloticus
MGP_SPRETEiJ_G0028091	Gpn1	94	79.487	ENSORLG00020015676	gpn1	98	71.823	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028091	Gpn1	98	76.393	ENSORLG00015013049	gpn1	96	76.127	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028091	Gpn1	98	76.064	ENSOMEG00000022023	gpn1	96	76.064	Oryzias_melastigma
MGP_SPRETEiJ_G0028091	Gpn1	90	90.120	ENSOGAG00000014057	GPN1	96	89.595	Otolemur_garnettii
MGP_SPRETEiJ_G0028091	Gpn1	98	91.758	ENSPPAG00000022926	GPN1	96	91.129	Pan_paniscus
MGP_SPRETEiJ_G0028091	Gpn1	99	90.323	ENSPPRG00000001472	GPN1	96	91.418	Panthera_pardus
MGP_SPRETEiJ_G0028091	Gpn1	99	90.323	ENSPTIG00000007504	GPN1	96	91.418	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028091	Gpn1	98	91.209	ENSPTRG00000011776	GPN1	96	90.591	Pan_troglodytes
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSPANG00000011578	GPN1	96	90.860	Papio_anubis
MGP_SPRETEiJ_G0028091	Gpn1	93	80.115	ENSPKIG00000007460	gpn1	87	80.115	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028091	Gpn1	99	70.241	ENSPMGG00000013238	gpn1	92	67.828	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028091	Gpn1	100	94.102	ENSPEMG00000003913	Gpn1	100	94.102	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028091	Gpn1	95	87.252	ENSPCIG00000026182	GPN1	97	85.175	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028091	Gpn1	98	75.616	ENSPFOG00000000034	gpn1	92	75.068	Poecilia_formosa
MGP_SPRETEiJ_G0028091	Gpn1	98	75.616	ENSPLAG00000023798	gpn1	92	75.068	Poecilia_latipinna
MGP_SPRETEiJ_G0028091	Gpn1	98	76.164	ENSPMEG00000002283	gpn1	92	75.890	Poecilia_mexicana
MGP_SPRETEiJ_G0028091	Gpn1	98	76.438	ENSPREG00000009028	gpn1	96	73.529	Poecilia_reticulata
MGP_SPRETEiJ_G0028091	Gpn1	98	82.418	ENSPPYG00000012538	GPN1	93	91.640	Pongo_abelii
MGP_SPRETEiJ_G0028091	Gpn1	97	91.944	ENSPCOG00000028038	GPN1	99	91.667	Propithecus_coquereli
MGP_SPRETEiJ_G0028091	Gpn1	93	87.861	ENSPVAG00000015220	GPN1	100	87.861	Pteropus_vampyrus
MGP_SPRETEiJ_G0028091	Gpn1	98	77.808	ENSPNYG00000019130	gpn1	91	77.260	Pundamilia_nyererei
MGP_SPRETEiJ_G0028091	Gpn1	94	74.930	ENSPNAG00000010900	gpn1	77	80.564	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028091	Gpn1	97	95.291	ENSRNOG00000004941	Gpn1	100	95.174	Rattus_norvegicus
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSRBIG00000038211	GPN1	96	90.860	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	ENSRROG00000026146	GPN1	99	91.468	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028091	Gpn1	75	55.363	YJR072C	NPA3	63	61.317	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028091	Gpn1	98	91.209	ENSSBOG00000025586	GPN1	96	90.591	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028091	Gpn1	95	80.966	ENSSFOG00015019441	gpn1	88	80.966	Scleropages_formosus
MGP_SPRETEiJ_G0028091	Gpn1	94	77.493	ENSSMAG00000005973	gpn1	91	75.543	Scophthalmus_maximus
MGP_SPRETEiJ_G0028091	Gpn1	94	79.370	ENSSDUG00000006929	gpn1	90	76.437	Seriola_dumerili
MGP_SPRETEiJ_G0028091	Gpn1	98	76.503	ENSSLDG00000014532	gpn1	91	76.503	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028091	Gpn1	83	81.877	ENSSPAG00000015690	gpn1	83	79.448	Stegastes_partitus
MGP_SPRETEiJ_G0028091	Gpn1	100	89.544	ENSSSCG00000008546	GPN1	100	89.544	Sus_scrofa
MGP_SPRETEiJ_G0028091	Gpn1	93	82.133	ENSTGUG00000014626	GPN1	100	79.178	Taeniopygia_guttata
MGP_SPRETEiJ_G0028091	Gpn1	95	76.751	ENSTRUG00000004290	gpn1	92	75.068	Takifugu_rubripes
MGP_SPRETEiJ_G0028091	Gpn1	95	78.431	ENSTNIG00000002572	gpn1	99	76.064	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028091	Gpn1	99	89.785	ENSTBEG00000007425	GPN1	99	89.785	Tupaia_belangeri
MGP_SPRETEiJ_G0028091	Gpn1	99	88.978	ENSTTRG00000012531	GPN1	99	87.097	Tursiops_truncatus
MGP_SPRETEiJ_G0028091	Gpn1	79	80.952	ENSUAMG00000012406	-	96	84.979	Ursus_americanus
MGP_SPRETEiJ_G0028091	Gpn1	99	90.860	ENSUMAG00000020247	GPN1	88	90.860	Ursus_maritimus
MGP_SPRETEiJ_G0028091	Gpn1	98	75.342	ENSXMAG00000005436	gpn1	83	74.521	Xiphophorus_maculatus