EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: A630055H10Rik
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 66971 bases
Position: chr5:40787703-40854673
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0070628	RRM_1	PF00076.22	9e-11	1	1
MGP_SPRETEiJ_P0070629	RRM_1	PF00076.22	9.8e-11	1	1
MGP_SPRETEiJ_P0070631	RRM_1	PF00076.22	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0070628	-	7040	-	MGP_SPRETEiJ_P0070628	990 (aa)	-	-
MGP_SPRETEiJ_T0070629	-	6842	-	MGP_SPRETEiJ_P0070629	1020 (aa)	-	-
MGP_SPRETEiJ_T0070631	-	837	-	MGP_SPRETEiJ_P0070631	279 (aa)	-	UPI000620AC31
MGP_SPRETEiJ_T0070630	-	1763	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0070633	-	640	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0070632	-	208	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028187	-	99	61.736	MGP_SPRETEiJ_G0023829	Cpeb3	100	78.037
MGP_SPRETEiJ_G0028187	-	85	65.323	MGP_SPRETEiJ_G0017016	Cpeb4	99	79.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028187	-	100	98.566	ENSG00000137449	CPEB2	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0028187	-	99	75.524	ENSAPOG00000023124	cpeb2	70	79.078	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028187	-	94	95.203	ENSAMEG00000001477	-	100	98.891	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028187	-	99	73.898	ENSACIG00000000358	cpeb2	75	69.706	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028187	-	99	74.460	ENSAOCG00000014750	cpeb2	74	69.969	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028187	-	99	71.947	ENSAPEG00000016778	cpeb2	100	86.918	Amphiprion_percula
MGP_SPRETEiJ_G0028187	-	99	76.978	ENSATEG00000013906	cpeb2	85	66.898	Anabas_testudineus
MGP_SPRETEiJ_G0028187	-	96	90.975	ENSAPLG00000005039	CPEB2	100	96.499	Anas_platyrhynchos
MGP_SPRETEiJ_G0028187	-	100	94.483	ENSANAG00000004909	CPEB2	100	96.321	Aotus_nancymaae
MGP_SPRETEiJ_G0028187	-	99	75.524	ENSACLG00000017893	cpeb2	74	72.857	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028187	-	99	78.777	ENSAMXG00000030819	cpeb2	68	79.469	Astyanax_mexicanus
MGP_SPRETEiJ_G0028187	-	100	97.491	ENSBTAG00000019847	CPEB2	100	97.651	Bos_taurus
MGP_SPRETEiJ_G0028187	-	100	95.470	ENSCJAG00000038767	CPEB2	100	96.160	Callithrix_jacchus
MGP_SPRETEiJ_G0028187	-	94	94.834	ENSCAFG00000015372	CPEB2	99	98.753	Canis_familiaris
MGP_SPRETEiJ_G0028187	-	100	95.122	ENSCAFG00020011244	CPEB2	98	99.091	Canis_lupus_dingo
MGP_SPRETEiJ_G0028187	-	100	97.491	ENSCHIG00000022582	CPEB2	100	96.309	Capra_hircus
MGP_SPRETEiJ_G0028187	-	87	99.174	ENSTSYG00000003779	-	100	99.167	Carlito_syrichta
MGP_SPRETEiJ_G0028187	-	94	98.473	ENSCAPG00000003843	-	100	98.473	Cavia_aperea
MGP_SPRETEiJ_G0028187	-	99	88.636	ENSCPOG00000001180	-	97	94.065	Cavia_porcellus
MGP_SPRETEiJ_G0028187	-	97	88.333	ENSCCAG00000032725	CPEB2	100	96.007	Cebus_capucinus
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSCATG00000040126	CPEB2	100	96.160	Cercocebus_atys
MGP_SPRETEiJ_G0028187	-	94	98.099	ENSCLAG00000000949	-	99	98.099	Chinchilla_lanigera
MGP_SPRETEiJ_G0028187	-	100	87.106	ENSCSAG00000016370	CPEB2	100	87.775	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028187	-	60	94.318	ENSCHOG00000003058	-	100	99.438	Choloepus_hoffmanni
MGP_SPRETEiJ_G0028187	-	100	97.133	ENSCPBG00000005454	CPEB2	100	68.026	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028187	-	87	99.174	ENSCANG00000040670	CPEB2	100	97.674	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028187	-	100	96.984	ENSCGRG00001011001	Cpeb2	100	96.984	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028187	-	94	99.620	ENSCGRG00000007200	-	99	99.620	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028187	-	99	78.417	ENSCVAG00000013200	cpeb2	100	82.265	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028187	-	81	85.088	ENSDARG00000052604	cpeb2	100	89.183	Danio_rerio
MGP_SPRETEiJ_G0028187	-	84	66.383	ENSDARG00000100499	cpeb4b	61	75.385	Danio_rerio
MGP_SPRETEiJ_G0028187	-	100	96.167	ENSDNOG00000047761	CPEB2	100	98.868	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028187	-	94	98.473	ENSDORG00000015311	-	100	98.473	Dipodomys_ordii
MGP_SPRETEiJ_G0028187	-	94	83.333	ENSETEG00000018238	-	87	100.000	Echinops_telfairi
MGP_SPRETEiJ_G0028187	-	100	95.122	ENSEASG00005005397	CPEB2	100	97.663	Equus_asinus_asinus
MGP_SPRETEiJ_G0028187	-	100	85.673	ENSECAG00000008722	CPEB2	100	96.327	Equus_caballus
MGP_SPRETEiJ_G0028187	-	99	77.338	ENSELUG00000005824	cpeb2	69	79.144	Esox_lucius
MGP_SPRETEiJ_G0028187	-	100	94.138	ENSFCAG00000027193	CPEB2	100	88.107	Felis_catus
MGP_SPRETEiJ_G0028187	-	85	94.694	ENSFALG00000009331	CPEB2	100	98.824	Ficedula_albicollis
MGP_SPRETEiJ_G0028187	-	92	88.194	ENSFDAG00000015407	-	100	99.565	Fukomys_damarensis
MGP_SPRETEiJ_G0028187	-	99	78.058	ENSFHEG00000013134	cpeb2	88	65.857	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028187	-	100	90.816	ENSGALG00000014516	CPEB2	96	98.636	Gallus_gallus
MGP_SPRETEiJ_G0028187	-	99	77.698	ENSGAFG00000019240	cpeb2	100	81.938	Gambusia_affinis
MGP_SPRETEiJ_G0028187	-	99	63.385	ENSGACG00000013966	cpeb2	99	74.167	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028187	-	100	97.133	ENSGAGG00000010321	CPEB2	100	67.811	Gopherus_agassizii
MGP_SPRETEiJ_G0028187	-	94	94.505	ENSGGOG00000004449	CPEB2	100	97.826	Gorilla_gorilla
MGP_SPRETEiJ_G0028187	-	99	78.058	ENSHBUG00000023297	cpeb2	74	72.857	Haplochromis_burtoni
MGP_SPRETEiJ_G0028187	-	99	97.842	ENSHGLG00000018058	-	100	97.842	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028187	-	94	97.710	ENSHGLG00100000538	-	100	97.710	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028187	-	99	64.194	ENSHCOG00000012069	cpeb2	73	69.949	Hippocampus_comes
MGP_SPRETEiJ_G0028187	-	99	76.259	ENSIPUG00000001181	CPEB2	68	74.472	Ictalurus_punctatus
MGP_SPRETEiJ_G0028187	-	94	97.710	ENSSTOG00000002388	-	100	97.710	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028187	-	99	97.122	ENSJJAG00000013747	-	100	97.122	Jaculus_jaculus
MGP_SPRETEiJ_G0028187	-	99	74.126	ENSKMAG00000013593	cpeb2	86	74.567	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028187	-	94	69.366	ENSLBEG00000022680	cpeb2	100	79.668	Labrus_bergylta
MGP_SPRETEiJ_G0028187	-	99	79.221	ENSLOCG00000009876	cpeb2	62	79.461	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028187	-	100	85.161	ENSLAFG00000007142	-	100	92.931	Loxodonta_africana
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSMFAG00000006541	CPEB2	100	96.154	Macaca_fascicularis
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSMMUG00000001384	CPEB2	100	96.154	Macaca_mulatta
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSMNEG00000041798	CPEB2	100	87.584	Macaca_nemestrina
MGP_SPRETEiJ_G0028187	-	87	99.174	ENSMLEG00000026496	-	100	99.167	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028187	-	99	75.175	ENSMAMG00000013478	cpeb2	83	67.714	Mastacembelus_armatus
MGP_SPRETEiJ_G0028187	-	99	78.058	ENSMZEG00005020634	cpeb2	74	72.857	Maylandia_zebra
MGP_SPRETEiJ_G0028187	-	98	90.391	ENSMGAG00000005200	CPEB2	99	96.507	Meleagris_gallopavo
MGP_SPRETEiJ_G0028187	-	100	99.642	ENSMAUG00000012556	Cpeb2	100	99.642	Mesocricetus_auratus
MGP_SPRETEiJ_G0028187	-	100	97.163	ENSMICG00000032133	CPEB2	99	97.238	Microcebus_murinus
MGP_SPRETEiJ_G0028187	-	100	96.864	ENSMOCG00000004212	Cpeb2	100	97.983	Microtus_ochrogaster
MGP_SPRETEiJ_G0028187	-	99	68.506	ENSMMOG00000006038	cpeb2	98	73.913	Mola_mola
MGP_SPRETEiJ_G0028187	-	97	85.390	ENSMODG00000001149	CPEB2	100	92.434	Monodelphis_domestica
MGP_SPRETEiJ_G0028187	-	100	99.642	MGP_CAROLIEiJ_G0027191	-	100	99.642	Mus_caroli
MGP_SPRETEiJ_G0028187	-	100	100.000	ENSMUSG00000039782	Cpeb2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0028187	-	100	99.642	MGP_PahariEiJ_G0016973	Cpeb2	100	99.642	Mus_pahari
MGP_SPRETEiJ_G0028187	-	87	84.643	ENSMPUG00000002117	-	100	99.348	Mustela_putorius_furo
MGP_SPRETEiJ_G0028187	-	99	87.948	ENSMLUG00000000894	CPEB2	100	94.631	Myotis_lucifugus
MGP_SPRETEiJ_G0028187	-	99	97.482	ENSNGAG00000010275	-	100	97.482	Nannospalax_galili
MGP_SPRETEiJ_G0028187	-	99	75.524	ENSNBRG00000004949	cpeb2	74	72.857	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028187	-	87	98.760	ENSNLEG00000016275	-	100	98.958	Nomascus_leucogenys
MGP_SPRETEiJ_G0028187	-	94	97.710	ENSODEG00000009313	-	100	97.710	Octodon_degus
MGP_SPRETEiJ_G0028187	-	81	83.333	ENSONIG00000003107	cpeb2	100	87.981	Oreochromis_niloticus
MGP_SPRETEiJ_G0028187	-	87	83.571	ENSOANG00000003552	-	100	98.696	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028187	-	94	88.055	ENSOCUG00000007950	-	99	97.095	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028187	-	99	70.861	ENSORLG00000016222	cpeb2	87	63.930	Oryzias_latipes
MGP_SPRETEiJ_G0028187	-	99	71.429	ENSORLG00020018105	cpeb2	87	64.238	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028187	-	99	70.957	ENSORLG00015013801	cpeb2	87	64.065	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028187	-	94	73.764	ENSOMEG00000005079	cpeb2	100	82.483	Oryzias_melastigma
MGP_SPRETEiJ_G0028187	-	97	88.000	ENSOGAG00000011237	CPEB2	98	92.644	Otolemur_garnettii
MGP_SPRETEiJ_G0028187	-	98	85.149	ENSOARG00000008716	-	99	95.316	Ovis_aries
MGP_SPRETEiJ_G0028187	-	100	95.819	ENSPPAG00000009844	-	100	98.583	Pan_paniscus
MGP_SPRETEiJ_G0028187	-	100	94.138	ENSPPRG00000008207	CPEB2	100	96.167	Panthera_pardus
MGP_SPRETEiJ_G0028187	-	94	84.667	ENSPTIG00000015956	-	80	98.750	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSPTRG00000015924	CPEB2	100	87.524	Pan_troglodytes
MGP_SPRETEiJ_G0028187	-	100	94.828	ENSPANG00000017542	CPEB2	100	92.911	Papio_anubis
MGP_SPRETEiJ_G0028187	-	99	80.851	ENSPKIG00000006396	cpeb2	60	81.560	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028187	-	99	87.097	ENSPSIG00000009111	CPEB2	100	99.070	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028187	-	99	75.261	ENSPMGG00000023340	cpeb2	86	92.760	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028187	-	100	99.642	ENSPEMG00000024159	-	100	99.642	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028187	-	100	94.774	ENSPCIG00000024549	CPEB2	55	91.612	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028187	-	99	77.338	ENSPFOG00000018603	cpeb2	76	73.618	Poecilia_formosa
MGP_SPRETEiJ_G0028187	-	99	71.000	ENSPMEG00000001535	cpeb2	92	62.390	Poecilia_mexicana
MGP_SPRETEiJ_G0028187	-	99	70.033	ENSPREG00000018393	cpeb2	99	74.916	Poecilia_reticulata
MGP_SPRETEiJ_G0028187	-	97	85.390	ENSPPYG00000014613	-	100	97.492	Pongo_abelii
MGP_SPRETEiJ_G0028187	-	94	84.615	ENSPVAG00000007732	-	100	92.708	Pteropus_vampyrus
MGP_SPRETEiJ_G0028187	-	99	78.058	ENSPNYG00000012125	cpeb2	74	72.857	Pundamilia_nyererei
MGP_SPRETEiJ_G0028187	-	99	78.417	ENSPNAG00000006826	cpeb2	69	77.837	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028187	-	97	86.688	ENSRNOG00000005043	Cpeb2	100	99.455	Rattus_norvegicus
MGP_SPRETEiJ_G0028187	-	100	95.819	ENSRBIG00000028478	CPEB2	100	90.231	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028187	-	98	88.779	ENSRROG00000021234	-	100	99.185	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028187	-	100	95.470	ENSSBOG00000023921	CPEB2	100	98.929	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028187	-	99	79.137	ENSSMAG00000018806	cpeb2	87	65.138	Scophthalmus_maximus
MGP_SPRETEiJ_G0028187	-	99	72.277	ENSSDUG00000020464	cpeb2	86	63.001	Seriola_dumerili
MGP_SPRETEiJ_G0028187	-	99	78.058	ENSSLDG00000013451	cpeb2	86	66.038	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028187	-	100	85.531	ENSSPUG00000013394	CPEB2	100	96.047	Sphenodon_punctatus
MGP_SPRETEiJ_G0028187	-	99	78.623	ENSSPAG00000013922	cpeb2	70	79.537	Stegastes_partitus
MGP_SPRETEiJ_G0028187	-	99	98.201	ENSSSCG00000038410	CPEB2	100	97.442	Sus_scrofa
MGP_SPRETEiJ_G0028187	-	94	95.420	ENSTGUG00000009822	CPEB2	100	95.556	Taeniopygia_guttata
MGP_SPRETEiJ_G0028187	-	99	73.381	ENSTRUG00000022887	cpeb2	74	69.524	Takifugu_rubripes
MGP_SPRETEiJ_G0028187	-	99	66.038	ENSTNIG00000017678	cpeb2	99	75.336	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028187	-	94	85.000	ENSTTRG00000003940	-	100	98.958	Tursiops_truncatus
MGP_SPRETEiJ_G0028187	-	98	85.016	ENSUAMG00000025982	-	99	92.190	Ursus_americanus
MGP_SPRETEiJ_G0028187	-	87	98.347	ENSVVUG00000015140	CPEB2	99	98.753	Vulpes_vulpes
MGP_SPRETEiJ_G0028187	-	99	83.553	ENSXETG00000020324	cpeb2	99	80.135	Xenopus_tropicalis
MGP_SPRETEiJ_G0028187	-	99	76.619	ENSXMAG00000002128	cpeb2	87	67.911	Xiphophorus_maculatus