EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028374 (Gene tree)
Gene ID: -
Gene Symbol: Grsf1
Alias: D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 21583 bases
Position: chr5:87898050-87919632
Accession: 106479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0071635	RRM_1	PF00076.22	2e-23	1	1
MGP_SPRETEiJ_P0071634	RRM_1	PF00076.22	7.2e-23	1	1
MGP_SPRETEiJ_P0071633	RRM_1	PF00076.22	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0071633	-	1197	-	MGP_SPRETEiJ_P0071633	273 (aa)	-	-
MGP_SPRETEiJ_T0071636	-	881	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071637	-	485	-	MGP_SPRETEiJ_P0071637	57 (aa)	-	UPI00015AA2C9
MGP_SPRETEiJ_T0071634	-	2539	-	MGP_SPRETEiJ_P0071634	479 (aa)	-	-
MGP_SPRETEiJ_T0071635	-	2287	-	MGP_SPRETEiJ_P0071635	362 (aa)	-	-
MGP_SPRETEiJ_T0071638	-	319	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028374	Grsf1	70	67.532	MGP_SPRETEiJ_G0016207	Hnrnph3	58	67.089
MGP_SPRETEiJ_G0028374	Grsf1	92	64.000	MGP_SPRETEiJ_G0034560	Hnrnph2	62	63.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028374	Grsf1	100	92.541	ENSG00000132463	GRSF1	100	93.082	Homo_sapiens
MGP_SPRETEiJ_G0028374	Grsf1	99	94.183	ENSAMEG00000005896	GRSF1	100	93.923	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028374	Grsf1	99	70.950	ENSACAG00000012921	GRSF1	91	60.870	Anolis_carolinensis
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSANAG00000022114	GRSF1	100	92.067	Aotus_nancymaae
MGP_SPRETEiJ_G0028374	Grsf1	100	94.199	ENSBTAG00000008577	GRSF1	100	94.199	Bos_taurus
MGP_SPRETEiJ_G0028374	Grsf1	99	94.183	ENSCJAG00000014477	GRSF1	99	94.481	Callithrix_jacchus
MGP_SPRETEiJ_G0028374	Grsf1	91	94.662	ENSCAFG00000002922	GRSF1	100	94.662	Canis_familiaris
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSCAFG00020027060	GRSF1	97	97.619	Canis_lupus_dingo
MGP_SPRETEiJ_G0028374	Grsf1	99	94.183	ENSCHIG00000021580	GRSF1	100	92.083	Capra_hircus
MGP_SPRETEiJ_G0028374	Grsf1	100	77.198	ENSTSYG00000028860	-	100	77.198	Carlito_syrichta
MGP_SPRETEiJ_G0028374	Grsf1	99	95.291	ENSTSYG00000008487	-	100	95.283	Carlito_syrichta
MGP_SPRETEiJ_G0028374	Grsf1	91	88.636	ENSCAPG00000000156	GRSF1	100	88.636	Cavia_aperea
MGP_SPRETEiJ_G0028374	Grsf1	99	88.366	ENSCPOG00000011662	GRSF1	100	88.366	Cavia_porcellus
MGP_SPRETEiJ_G0028374	Grsf1	99	92.798	ENSCCAG00000028735	-	100	90.814	Cebus_capucinus
MGP_SPRETEiJ_G0028374	Grsf1	91	80.695	ENSCCAG00000024189	-	87	77.007	Cebus_capucinus
MGP_SPRETEiJ_G0028374	Grsf1	99	93.629	ENSCATG00000035808	GRSF1	99	93.871	Cercocebus_atys
MGP_SPRETEiJ_G0028374	Grsf1	99	88.920	ENSCLAG00000003057	GRSF1	100	88.920	Chinchilla_lanigera
MGP_SPRETEiJ_G0028374	Grsf1	99	93.075	ENSCSAG00000004856	GRSF1	100	91.232	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028374	Grsf1	99	69.890	ENSCPBG00000019502	GRSF1	86	66.320	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028374	Grsf1	91	94.025	ENSCANG00000037992	GRSF1	100	94.025	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028374	Grsf1	100	95.856	ENSCGRG00001019953	Grsf1	100	95.856	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028374	Grsf1	99	95.845	ENSCGRG00000005357	Grsf1	100	95.845	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028374	Grsf1	99	95.845	ENSDORG00000015145	Grsf1	100	96.350	Dipodomys_ordii
MGP_SPRETEiJ_G0028374	Grsf1	95	93.043	ENSETEG00000013786	GRSF1	100	93.043	Echinops_telfairi
MGP_SPRETEiJ_G0028374	Grsf1	99	94.183	ENSEASG00005016685	GRSF1	94	92.292	Equus_asinus_asinus
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSECAG00000024208	GRSF1	94	92.693	Equus_caballus
MGP_SPRETEiJ_G0028374	Grsf1	99	45.085	ENSELUG00000011613	-	89	45.085	Esox_lucius
MGP_SPRETEiJ_G0028374	Grsf1	99	94.460	ENSFCAG00000007270	GRSF1	100	93.319	Felis_catus
MGP_SPRETEiJ_G0028374	Grsf1	93	55.882	ENSFALG00000008394	GRSF1	98	55.882	Ficedula_albicollis
MGP_SPRETEiJ_G0028374	Grsf1	79	86.207	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
MGP_SPRETEiJ_G0028374	Grsf1	96	51.289	ENSGALG00000031160	GRSF1	72	51.576	Gallus_gallus
MGP_SPRETEiJ_G0028374	Grsf1	99	70.330	ENSGAGG00000006013	GRSF1	99	64.024	Gopherus_agassizii
MGP_SPRETEiJ_G0028374	Grsf1	91	92.767	ENSGGOG00000014852	-	100	92.767	Gorilla_gorilla
MGP_SPRETEiJ_G0028374	Grsf1	99	87.812	ENSHGLG00000000661	GRSF1	100	87.812	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028374	Grsf1	99	87.812	ENSHGLG00100005974	GRSF1	100	93.431	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028374	Grsf1	100	95.856	ENSSTOG00000011569	GRSF1	100	97.674	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028374	Grsf1	98	91.014	ENSJJAG00000005325	Grsf1	100	92.701	Jaculus_jaculus
MGP_SPRETEiJ_G0028374	Grsf1	98	52.825	ENSLACG00000009507	GRSF1	97	52.825	Latimeria_chalumnae
MGP_SPRETEiJ_G0028374	Grsf1	96	48.718	ENSLOCG00000011589	GRSF1	77	48.718	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028374	Grsf1	99	92.265	ENSLAFG00000017032	-	100	90.289	Loxodonta_africana
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSMFAG00000037346	GRSF1	99	94.194	Macaca_fascicularis
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSMMUG00000000380	GRSF1	99	94.481	Macaca_mulatta
MGP_SPRETEiJ_G0028374	Grsf1	100	85.386	ENSMNEG00000023162	GRSF1	97	95.238	Macaca_nemestrina
MGP_SPRETEiJ_G0028374	Grsf1	100	93.646	ENSMLEG00000007180	GRSF1	100	93.646	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028374	Grsf1	92	52.994	ENSMGAG00000009940	GRSF1	98	52.994	Meleagris_gallopavo
MGP_SPRETEiJ_G0028374	Grsf1	99	93.629	ENSMICG00000005385	GRSF1	99	93.629	Microcebus_murinus
MGP_SPRETEiJ_G0028374	Grsf1	79	92.241	ENSMOCG00000012769	-	100	95.620	Microtus_ochrogaster
MGP_SPRETEiJ_G0028374	Grsf1	99	82.597	ENSMODG00000019088	GRSF1	90	77.366	Monodelphis_domestica
MGP_SPRETEiJ_G0028374	Grsf1	100	99.724	MGP_CAROLIEiJ_G0027377	Grsf1	100	99.724	Mus_caroli
MGP_SPRETEiJ_G0028374	Grsf1	100	99.724	ENSMUSG00000044221	Grsf1	100	99.724	Mus_musculus
MGP_SPRETEiJ_G0028374	Grsf1	100	96.242	MGP_PahariEiJ_G0017155	Grsf1	100	97.810	Mus_pahari
MGP_SPRETEiJ_G0028374	Grsf1	99	94.183	ENSMPUG00000009499	GRSF1	96	94.183	Mustela_putorius_furo
MGP_SPRETEiJ_G0028374	Grsf1	99	92.033	ENSMLUG00000028158	GRSF1	100	91.781	Myotis_lucifugus
MGP_SPRETEiJ_G0028374	Grsf1	77	95.620	ENSNGAG00000022132	-	100	95.620	Nannospalax_galili
MGP_SPRETEiJ_G0028374	Grsf1	94	92.880	ENSNLEG00000007721	-	99	92.581	Nomascus_leucogenys
MGP_SPRETEiJ_G0028374	Grsf1	99	71.788	ENSMEUG00000015942	GRSF1	99	71.788	Notamacropus_eugenii
MGP_SPRETEiJ_G0028374	Grsf1	98	89.667	ENSOPRG00000010148	-	78	89.667	Ochotona_princeps
MGP_SPRETEiJ_G0028374	Grsf1	94	77.193	ENSODEG00000010775	-	100	77.193	Octodon_degus
MGP_SPRETEiJ_G0028374	Grsf1	99	89.751	ENSODEG00000001826	-	100	86.221	Octodon_degus
MGP_SPRETEiJ_G0028374	Grsf1	99	76.731	ENSODEG00000004897	-	100	76.731	Octodon_degus
MGP_SPRETEiJ_G0028374	Grsf1	94	63.415	ENSOANG00000013696	-	100	63.415	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028374	Grsf1	99	94.737	ENSOCUG00000010029	GRSF1	100	80.550	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028374	Grsf1	99	90.385	ENSOGAG00000000141	-	100	90.137	Otolemur_garnettii
MGP_SPRETEiJ_G0028374	Grsf1	99	81.163	ENSOGAG00000026370	-	99	71.459	Otolemur_garnettii
MGP_SPRETEiJ_G0028374	Grsf1	99	93.956	ENSOARG00000011898	GRSF1	100	93.699	Ovis_aries
MGP_SPRETEiJ_G0028374	Grsf1	91	93.082	ENSPPAG00000042456	-	100	93.082	Pan_paniscus
MGP_SPRETEiJ_G0028374	Grsf1	99	94.460	ENSPPRG00000022913	GRSF1	100	93.319	Panthera_pardus
MGP_SPRETEiJ_G0028374	Grsf1	100	94.199	ENSPTIG00000008060	GRSF1	100	94.199	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028374	Grsf1	99	92.244	ENSPTRG00000016136	GRSF1	99	92.903	Pan_troglodytes
MGP_SPRETEiJ_G0028374	Grsf1	99	93.075	ENSPANG00000018597	GRSF1	99	93.226	Papio_anubis
MGP_SPRETEiJ_G0028374	Grsf1	98	74.000	ENSPSIG00000014267	-	96	74.000	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028374	Grsf1	100	96.685	ENSPEMG00000012814	Grsf1	100	96.685	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028374	Grsf1	99	83.102	ENSPCIG00000000627	GRSF1	100	80.457	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028374	Grsf1	100	77.131	ENSPPYG00000014812	GRSF1	100	77.547	Pongo_abelii
MGP_SPRETEiJ_G0028374	Grsf1	99	93.906	ENSPCAG00000013949	GRSF1	100	85.624	Procavia_capensis
MGP_SPRETEiJ_G0028374	Grsf1	99	94.737	ENSPVAG00000004338	GRSF1	100	86.639	Pteropus_vampyrus
MGP_SPRETEiJ_G0028374	Grsf1	100	96.242	ENSRNOG00000003392	Grsf1	100	96.242	Rattus_norvegicus
MGP_SPRETEiJ_G0028374	Grsf1	99	93.629	ENSRBIG00000036494	GRSF1	99	93.871	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028374	Grsf1	99	93.352	ENSRROG00000035735	GRSF1	99	93.548	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028374	Grsf1	91	94.156	ENSSBOG00000032141	GRSF1	99	69.058	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028374	Grsf1	99	85.754	ENSSHAG00000018365	GRSF1	95	84.890	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028374	Grsf1	91	93.182	ENSSARG00000011681	GRSF1	100	93.182	Sorex_araneus
MGP_SPRETEiJ_G0028374	Grsf1	98	61.494	ENSSPUG00000007576	GRSF1	99	56.838	Sphenodon_punctatus
MGP_SPRETEiJ_G0028374	Grsf1	99	93.075	ENSSSCG00000008940	GRSF1	100	91.441	Sus_scrofa
MGP_SPRETEiJ_G0028374	Grsf1	94	54.755	ENSTGUG00000001644	GRSF1	99	54.755	Taeniopygia_guttata
MGP_SPRETEiJ_G0028374	Grsf1	91	94.481	ENSTBEG00000010173	GRSF1	100	94.481	Tupaia_belangeri
MGP_SPRETEiJ_G0028374	Grsf1	99	88.366	ENSTTRG00000008405	GRSF1	93	88.462	Tursiops_truncatus
MGP_SPRETEiJ_G0028374	Grsf1	98	94.231	ENSUAMG00000008901	GRSF1	93	94.231	Ursus_americanus
MGP_SPRETEiJ_G0028374	Grsf1	99	94.737	ENSUMAG00000003757	GRSF1	87	94.737	Ursus_maritimus
MGP_SPRETEiJ_G0028374	Grsf1	99	80.609	ENSVPAG00000011889	GRSF1	100	80.609	Vicugna_pacos
MGP_SPRETEiJ_G0028374	Grsf1	95	93.895	ENSVVUG00000004150	GRSF1	100	93.895	Vulpes_vulpes
MGP_SPRETEiJ_G0028374	Grsf1	100	51.762	ENSXETG00000013850	grsf1	100	51.762	Xenopus_tropicalis