EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028454 (Gene tree)
Gene ID: -
Gene Symbol: Helq
Alias: D430018E21Rik|Hel308
Full Name: helicase%2C POLQ-like
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 36471 bases
Position: chr5:98853146-98889616
Accession: 2176740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0071989	ResIII	PF04851.15	2.5e-08	1	1
MGP_SPRETEiJ_P0071987	ResIII	PF04851.15	3.3e-08	1	1
MGP_SPRETEiJ_P0071989	DEAD	PF00270.29	4.6e-16	1	1
MGP_SPRETEiJ_P0071987	DEAD	PF00270.29	4.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0071987	-	3691	-	MGP_SPRETEiJ_P0071987	1069 (aa)	-	-
MGP_SPRETEiJ_T0071996	-	591	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071995	-	1628	-	MGP_SPRETEiJ_P0071995	311 (aa)	-	-
MGP_SPRETEiJ_T0071994	-	792	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071993	-	639	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071992	-	519	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071991	-	853	-	MGP_SPRETEiJ_P0071991	172 (aa)	-	-
MGP_SPRETEiJ_T0071990	-	442	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071988	-	989	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071989	-	2969	-	MGP_SPRETEiJ_P0071989	971 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028454	Helq	93	84.268	ENSG00000163312	HELQ	100	84.268	Homo_sapiens
MGP_SPRETEiJ_G0028454	Helq	94	78.429	ENSAMEG00000004921	HELQ	100	78.429	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028454	Helq	90	55.590	ENSACIG00000020216	helq	97	55.590	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028454	Helq	93	55.556	ENSAOCG00000014323	helq	99	55.217	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028454	Helq	77	56.711	ENSAPEG00000023153	-	87	56.941	Amphiprion_percula
MGP_SPRETEiJ_G0028454	Helq	91	64.384	ENSAPEG00000022964	helq	98	57.027	Amphiprion_percula
MGP_SPRETEiJ_G0028454	Helq	97	59.459	ENSATEG00000023420	helq	99	55.767	Anabas_testudineus
MGP_SPRETEiJ_G0028454	Helq	92	70.270	ENSAPLG00000012292	HELQ	95	70.270	Anas_platyrhynchos
MGP_SPRETEiJ_G0028454	Helq	97	70.270	ENSACAG00000010842	HELQ	92	70.270	Anolis_carolinensis
MGP_SPRETEiJ_G0028454	Helq	99	75.113	ENSANAG00000033513	HELQ	100	75.113	Aotus_nancymaae
MGP_SPRETEiJ_G0028454	Helq	77	62.275	ENSACLG00000010558	helq	100	62.275	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028454	Helq	90	60.000	ENSAMXG00000012252	helq	98	57.360	Astyanax_mexicanus
MGP_SPRETEiJ_G0028454	Helq	97	75.000	ENSBTAG00000018151	HELQ	100	74.930	Bos_taurus
MGP_SPRETEiJ_G0028454	Helq	71	37.852	WBGene00021905	helq-1	82	37.980	Caenorhabditis_elegans
MGP_SPRETEiJ_G0028454	Helq	99	74.751	ENSCJAG00000005247	HELQ	100	74.751	Callithrix_jacchus
MGP_SPRETEiJ_G0028454	Helq	95	77.485	ENSCAFG00000009108	HELQ	100	76.093	Canis_familiaris
MGP_SPRETEiJ_G0028454	Helq	93	78.156	ENSCAFG00020010495	HELQ	100	78.156	Canis_lupus_dingo
MGP_SPRETEiJ_G0028454	Helq	97	75.163	ENSCHIG00000020128	HELQ	100	75.160	Capra_hircus
MGP_SPRETEiJ_G0028454	Helq	93	72.000	ENSTSYG00000012900	HELQ	99	66.793	Carlito_syrichta
MGP_SPRETEiJ_G0028454	Helq	98	73.954	ENSCPOG00000009180	HELQ	98	73.954	Cavia_porcellus
MGP_SPRETEiJ_G0028454	Helq	99	74.773	ENSCCAG00000036773	HELQ	100	74.773	Cebus_capucinus
MGP_SPRETEiJ_G0028454	Helq	99	74.638	ENSCATG00000034442	HELQ	100	74.638	Cercocebus_atys
MGP_SPRETEiJ_G0028454	Helq	99	75.047	ENSCLAG00000004733	HELQ	99	75.047	Chinchilla_lanigera
MGP_SPRETEiJ_G0028454	Helq	99	74.728	ENSCSAG00000004405	HELQ	100	74.728	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028454	Helq	96	68.919	ENSCPBG00000007787	HELQ	99	66.170	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028454	Helq	72	52.246	ENSCING00000006332	-	96	52.246	Ciona_intestinalis
MGP_SPRETEiJ_G0028454	Helq	99	74.728	ENSCANG00000002407	HELQ	100	74.728	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028454	Helq	99	81.646	ENSCGRG00001024451	Helq	99	81.646	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028454	Helq	94	84.257	ENSCGRG00000000309	Helq	99	84.257	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028454	Helq	92	60.870	ENSCVAG00000020159	helq	99	54.024	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028454	Helq	96	58.730	ENSDARG00000079818	helq	99	62.997	Danio_rerio
MGP_SPRETEiJ_G0028454	Helq	72	43.284	FBgn0002899	mus301	76	43.284	Drosophila_melanogaster
MGP_SPRETEiJ_G0028454	Helq	89	77.778	ENSETEG00000012220	HELQ	85	77.778	Echinops_telfairi
MGP_SPRETEiJ_G0028454	Helq	97	75.304	ENSEASG00005013248	HELQ	100	75.298	Equus_asinus_asinus
MGP_SPRETEiJ_G0028454	Helq	97	75.614	ENSECAG00000020717	HELQ	99	75.603	Equus_caballus
MGP_SPRETEiJ_G0028454	Helq	57	79.582	ENSEEUG00000008373	-	67	79.582	Erinaceus_europaeus
MGP_SPRETEiJ_G0028454	Helq	94	60.526	ENSELUG00000002083	helq	99	53.839	Esox_lucius
MGP_SPRETEiJ_G0028454	Helq	99	78.069	ENSFCAG00000009921	HELQ	100	78.257	Felis_catus
MGP_SPRETEiJ_G0028454	Helq	85	70.667	ENSFALG00000005255	HELQ	97	66.774	Ficedula_albicollis
MGP_SPRETEiJ_G0028454	Helq	92	78.883	ENSFDAG00000018169	HELQ	99	78.883	Fukomys_damarensis
MGP_SPRETEiJ_G0028454	Helq	97	62.319	ENSFHEG00000015542	helq	99	54.958	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028454	Helq	78	59.521	ENSGMOG00000000020	helq	99	59.521	Gadus_morhua
MGP_SPRETEiJ_G0028454	Helq	93	71.622	ENSGALG00000011208	HELQ	92	71.622	Gallus_gallus
MGP_SPRETEiJ_G0028454	Helq	97	63.768	ENSGAFG00000008037	helq	98	55.503	Gambusia_affinis
MGP_SPRETEiJ_G0028454	Helq	78	61.031	ENSGACG00000001186	helq	99	63.588	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028454	Helq	95	69.444	ENSGAGG00000015134	HELQ	99	66.045	Gopherus_agassizii
MGP_SPRETEiJ_G0028454	Helq	97	81.159	ENSGGOG00000008598	HELQ	100	75.091	Gorilla_gorilla
MGP_SPRETEiJ_G0028454	Helq	97	54.848	ENSHBUG00000001997	helq	99	54.848	Haplochromis_burtoni
MGP_SPRETEiJ_G0028454	Helq	94	77.612	ENSHGLG00000019137	HELQ	99	76.353	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028454	Helq	94	77.612	ENSHGLG00100015489	HELQ	99	76.353	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028454	Helq	98	66.216	ENSIPUG00000003800	helq	94	65.333	Ictalurus_punctatus
MGP_SPRETEiJ_G0028454	Helq	97	60.526	ENSKMAG00000016486	helq	99	56.190	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028454	Helq	95	62.162	ENSLBEG00000021886	helq	99	53.927	Labrus_bergylta
MGP_SPRETEiJ_G0028454	Helq	98	58.333	ENSLACG00000010835	HELQ	98	58.194	Latimeria_chalumnae
MGP_SPRETEiJ_G0028454	Helq	97	64.000	ENSLOCG00000012099	helq	99	57.590	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028454	Helq	98	78.378	ENSLAFG00000001056	HELQ	100	76.660	Loxodonta_africana
MGP_SPRETEiJ_G0028454	Helq	99	74.909	ENSMFAG00000040731	HELQ	100	74.909	Macaca_fascicularis
MGP_SPRETEiJ_G0028454	Helq	99	74.819	ENSMMUG00000015350	HELQ	100	74.819	Macaca_mulatta
MGP_SPRETEiJ_G0028454	Helq	99	74.819	ENSMNEG00000038829	HELQ	100	74.819	Macaca_nemestrina
MGP_SPRETEiJ_G0028454	Helq	99	71.649	ENSMLEG00000035125	HELQ	100	71.649	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028454	Helq	97	60.526	ENSMAMG00000012364	helq	98	54.674	Mastacembelus_armatus
MGP_SPRETEiJ_G0028454	Helq	97	56.000	ENSMZEG00005023270	helq	99	55.038	Maylandia_zebra
MGP_SPRETEiJ_G0028454	Helq	92	72.973	ENSMGAG00000008112	HELQ	95	72.973	Meleagris_gallopavo
MGP_SPRETEiJ_G0028454	Helq	88	84.022	ENSMAUG00000000249	Helq	99	84.022	Mesocricetus_auratus
MGP_SPRETEiJ_G0028454	Helq	99	82.303	ENSMOCG00000014354	Helq	99	82.303	Microtus_ochrogaster
MGP_SPRETEiJ_G0028454	Helq	85	60.274	ENSMMOG00000011313	helq	97	57.806	Mola_mola
MGP_SPRETEiJ_G0028454	Helq	95	68.995	ENSMODG00000020774	HELQ	99	67.919	Monodelphis_domestica
MGP_SPRETEiJ_G0028454	Helq	100	97.007	MGP_CAROLIEiJ_G0027457	Helq	100	97.007	Mus_caroli
MGP_SPRETEiJ_G0028454	Helq	100	98.129	ENSMUSG00000035266	Helq	100	98.129	Mus_musculus
MGP_SPRETEiJ_G0028454	Helq	100	92.423	MGP_PahariEiJ_G0017235	Helq	100	92.423	Mus_pahari
MGP_SPRETEiJ_G0028454	Helq	84	79.515	ENSMPUG00000014683	HELQ	100	75.770	Mustela_putorius_furo
MGP_SPRETEiJ_G0028454	Helq	96	83.784	ENSMLUG00000017053	HELQ	93	83.784	Myotis_lucifugus
MGP_SPRETEiJ_G0028454	Helq	97	79.710	ENSNLEG00000009088	HELQ	100	75.362	Nomascus_leucogenys
MGP_SPRETEiJ_G0028454	Helq	78	62.963	ENSONIG00000012532	helq	100	62.963	Oreochromis_niloticus
MGP_SPRETEiJ_G0028454	Helq	67	72.639	ENSOANG00000002113	-	99	72.639	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028454	Helq	97	76.871	ENSOCUG00000013294	HELQ	100	76.620	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028454	Helq	77	60.632	ENSORLG00000022717	helq	85	60.714	Oryzias_latipes
MGP_SPRETEiJ_G0028454	Helq	77	60.753	ENSORLG00015006855	helq	86	60.833	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028454	Helq	97	62.162	ENSOMEG00000004983	helq	90	63.014	Oryzias_melastigma
MGP_SPRETEiJ_G0028454	Helq	93	70.238	ENSOGAG00000014188	HELQ	100	63.579	Otolemur_garnettii
MGP_SPRETEiJ_G0028454	Helq	97	76.708	ENSOARG00000002630	HELQ	100	76.079	Ovis_aries
MGP_SPRETEiJ_G0028454	Helq	99	75.000	ENSPPAG00000004520	HELQ	100	74.909	Pan_paniscus
MGP_SPRETEiJ_G0028454	Helq	99	75.683	ENSPPRG00000010520	HELQ	100	75.865	Panthera_pardus
MGP_SPRETEiJ_G0028454	Helq	99	76.138	ENSPTIG00000021394	HELQ	100	76.321	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028454	Helq	99	75.000	ENSPTRG00000016232	HELQ	100	74.819	Pan_troglodytes
MGP_SPRETEiJ_G0028454	Helq	99	74.638	ENSPANG00000005130	HELQ	100	74.638	Papio_anubis
MGP_SPRETEiJ_G0028454	Helq	97	62.162	ENSPKIG00000021702	helq	94	62.162	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028454	Helq	91	70.833	ENSPSIG00000015865	HELQ	99	66.832	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028454	Helq	91	58.209	ENSPMGG00000002986	helq	99	56.721	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028454	Helq	99	83.630	ENSPEMG00000007325	Helq	99	83.630	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028454	Helq	76	60.775	ENSPMAG00000004427	helq	100	60.967	Petromyzon_marinus
MGP_SPRETEiJ_G0028454	Helq	94	70.437	ENSPCIG00000019746	HELQ	99	70.188	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028454	Helq	95	60.000	ENSPFOG00000002091	helq	98	54.976	Poecilia_formosa
MGP_SPRETEiJ_G0028454	Helq	97	65.217	ENSPLAG00000015199	helq	97	55.661	Poecilia_latipinna
MGP_SPRETEiJ_G0028454	Helq	98	65.217	ENSPMEG00000014496	helq	89	65.217	Poecilia_mexicana
MGP_SPRETEiJ_G0028454	Helq	98	64.286	ENSPREG00000012605	helq	90	64.286	Poecilia_reticulata
MGP_SPRETEiJ_G0028454	Helq	99	75.204	ENSPPYG00000014897	HELQ	100	75.204	Pongo_abelii
MGP_SPRETEiJ_G0028454	Helq	79	79.073	ENSPCAG00000004842	HELQ	78	74.855	Procavia_capensis
MGP_SPRETEiJ_G0028454	Helq	97	71.429	ENSPVAG00000006438	HELQ	100	66.334	Pteropus_vampyrus
MGP_SPRETEiJ_G0028454	Helq	90	53.785	ENSPNYG00000010575	helq	96	54.065	Pundamilia_nyererei
MGP_SPRETEiJ_G0028454	Helq	92	57.762	ENSPNAG00000009397	helq	99	57.762	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028454	Helq	99	87.172	ENSRNOG00000002181	Helq	99	87.172	Rattus_norvegicus
MGP_SPRETEiJ_G0028454	Helq	99	74.547	ENSRBIG00000041497	HELQ	100	74.547	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028454	Helq	99	74.638	ENSRROG00000045128	HELQ	100	74.638	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028454	Helq	99	77.277	ENSSBOG00000034314	HELQ	100	77.277	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028454	Helq	99	70.179	ENSSHAG00000006446	HELQ	100	70.179	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028454	Helq	77	64.789	ENSSFOG00015019460	helq	95	61.484	Scleropages_formosus
MGP_SPRETEiJ_G0028454	Helq	97	56.579	ENSSDUG00000015665	helq	99	55.335	Seriola_dumerili
MGP_SPRETEiJ_G0028454	Helq	85	78.524	ENSSARG00000013932	HELQ	98	78.524	Sorex_araneus
MGP_SPRETEiJ_G0028454	Helq	79	56.686	ENSSPAG00000008705	helq	85	56.419	Stegastes_partitus
MGP_SPRETEiJ_G0028454	Helq	99	75.139	ENSSSCG00000009236	HELQ	100	75.991	Sus_scrofa
MGP_SPRETEiJ_G0028454	Helq	92	67.568	ENSTGUG00000002154	HELQ	100	63.501	Taeniopygia_guttata
MGP_SPRETEiJ_G0028454	Helq	97	55.123	ENSTRUG00000018644	helq	99	55.123	Takifugu_rubripes
MGP_SPRETEiJ_G0028454	Helq	78	61.429	ENSTNIG00000005673	helq	99	61.429	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028454	Helq	99	75.000	ENSTTRG00000004895	HELQ	100	74.864	Tursiops_truncatus
MGP_SPRETEiJ_G0028454	Helq	98	75.663	ENSUAMG00000012816	HELQ	100	74.772	Ursus_americanus
MGP_SPRETEiJ_G0028454	Helq	97	76.989	ENSUMAG00000008823	HELQ	100	76.520	Ursus_maritimus
MGP_SPRETEiJ_G0028454	Helq	99	71.429	ENSVPAG00000011357	HELQ	100	71.532	Vicugna_pacos
MGP_SPRETEiJ_G0028454	Helq	95	77.789	ENSVVUG00000015676	HELQ	100	76.520	Vulpes_vulpes
MGP_SPRETEiJ_G0028454	Helq	78	67.264	ENSXETG00000001831	helq	100	67.264	Xenopus_tropicalis
MGP_SPRETEiJ_G0028454	Helq	77	61.031	ENSXCOG00000016210	helq	99	61.751	Xiphophorus_couchianus
MGP_SPRETEiJ_G0028454	Helq	77	61.031	ENSXMAG00000012563	helq	99	61.751	Xiphophorus_maculatus