EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028455 (Gene tree)
Gene ID: -
Gene Symbol: Mrps18c
Alias: 1110037D14Rik
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 5630 bases
Position: chr5:98889645-98895274
Accession: 1915985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0072001	Ribosomal_S18	PF01084.20	9.8e-22	1	1
MGP_SPRETEiJ_P0071998	Ribosomal_S18	PF01084.20	1e-21	1	1
MGP_SPRETEiJ_P0071997	Ribosomal_S18	PF01084.20	4.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0071997	-	592	-	MGP_SPRETEiJ_P0071997	127 (aa)	-	-
MGP_SPRETEiJ_T0072000	-	411	-	MGP_SPRETEiJ_P0072000	42 (aa)	-	-
MGP_SPRETEiJ_T0072001	-	690	-	MGP_SPRETEiJ_P0072001	128 (aa)	-	-
MGP_SPRETEiJ_T0072002	-	212	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071999	-	256	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0071998	-	469	-	MGP_SPRETEiJ_P0071998	130 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028455	Mrps18c	93	32.090	MGP_SPRETEiJ_G0022568	Mrps18a	85	32.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSG00000163319	MRPS18C	83	77.049	Homo_sapiens
MGP_SPRETEiJ_G0028455	Mrps18c	93	71.311	ENSAMEG00000004915	MRPS18C	83	71.311	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028455	Mrps18c	93	62.295	ENSANAG00000028055	-	82	62.295	Aotus_nancymaae
MGP_SPRETEiJ_G0028455	Mrps18c	92	64.844	ENSANAG00000025323	-	79	64.844	Aotus_nancymaae
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSBTAG00000018155	MRPS18C	83	76.230	Bos_taurus
MGP_SPRETEiJ_G0028455	Mrps18c	93	47.541	ENSBTAG00000049836	-	77	47.541	Bos_taurus
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSCJAG00000042247	MRPS18C	81	76.230	Callithrix_jacchus
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.328	ENSCAFG00020010491	MRPS18C	83	80.328	Canis_lupus_dingo
MGP_SPRETEiJ_G0028455	Mrps18c	97	61.417	ENSCHIG00000022740	-	85	61.417	Capra_hircus
MGP_SPRETEiJ_G0028455	Mrps18c	93	42.623	ENSCHIG00000016551	-	77	42.623	Capra_hircus
MGP_SPRETEiJ_G0028455	Mrps18c	84	69.159	ENSCHIG00000019359	-	98	69.159	Capra_hircus
MGP_SPRETEiJ_G0028455	Mrps18c	83	63.303	ENSCHIG00000018805	-	77	63.303	Capra_hircus
MGP_SPRETEiJ_G0028455	Mrps18c	80	82.178	ENSCHIG00000004461	-	71	80.769	Capra_hircus
MGP_SPRETEiJ_G0028455	Mrps18c	93	73.770	ENSTSYG00000012924	MRPS18C	83	73.770	Carlito_syrichta
MGP_SPRETEiJ_G0028455	Mrps18c	93	72.951	ENSCPOG00000009198	MRPS18C	83	72.951	Cavia_porcellus
MGP_SPRETEiJ_G0028455	Mrps18c	93	67.227	ENSCCAG00000028283	-	82	67.227	Cebus_capucinus
MGP_SPRETEiJ_G0028455	Mrps18c	95	60.484	ENSCCAG00000025155	-	78	60.484	Cebus_capucinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	73.770	ENSCCAG00000019347	-	83	73.770	Cebus_capucinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSCCAG00000026577	-	83	75.410	Cebus_capucinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSCATG00000040697	MRPS18C	83	77.049	Cercocebus_atys
MGP_SPRETEiJ_G0028455	Mrps18c	93	72.951	ENSCLAG00000017397	-	83	72.951	Chinchilla_lanigera
MGP_SPRETEiJ_G0028455	Mrps18c	93	74.590	ENSCLAG00000008205	-	84	74.590	Chinchilla_lanigera
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSCANG00000038907	MRPS18C	83	77.049	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028455	Mrps18c	91	52.500	ENSCANG00000037347	-	77	52.066	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028455	Mrps18c	98	61.719	ENSCANG00000041165	-	88	61.719	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028455	Mrps18c	93	82.353	ENSCGRG00001000103	Mrps18c	83	82.353	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028455	Mrps18c	93	82.353	ENSCGRG00000002192	Mrps18c	83	82.353	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSDORG00000012749	Mrps18c	85	76.230	Dipodomys_ordii
MGP_SPRETEiJ_G0028455	Mrps18c	93	45.902	ENSETEG00000012223	-	83	45.902	Echinops_telfairi
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.165	ENSEASG00005013234	MRPS18C	83	80.165	Equus_asinus_asinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.992	ENSECAG00000020387	MRPS18C	83	80.992	Equus_caballus
MGP_SPRETEiJ_G0028455	Mrps18c	93	53.659	ENSEEUG00000003504	MRPS18C	83	53.659	Erinaceus_europaeus
MGP_SPRETEiJ_G0028455	Mrps18c	93	79.508	ENSFCAG00000042464	MRPS18C	83	79.508	Felis_catus
MGP_SPRETEiJ_G0028455	Mrps18c	93	73.770	ENSFDAG00000000250	-	83	73.770	Fukomys_damarensis
MGP_SPRETEiJ_G0028455	Mrps18c	95	63.710	ENSFDAG00000008778	-	86	63.710	Fukomys_damarensis
MGP_SPRETEiJ_G0028455	Mrps18c	93	59.836	ENSGGOG00000008603	MRPS18C	80	59.836	Gorilla_gorilla
MGP_SPRETEiJ_G0028455	Mrps18c	93	51.639	ENSGGOG00000040785	-	79	51.639	Gorilla_gorilla
MGP_SPRETEiJ_G0028455	Mrps18c	93	49.180	ENSGGOG00000037903	-	79	49.180	Gorilla_gorilla
MGP_SPRETEiJ_G0028455	Mrps18c	93	70.492	ENSHGLG00000020134	-	83	70.492	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSHGLG00000002953	-	84	75.410	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.067	ENSHGLG00000012671	-	80	68.067	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSHGLG00100016235	-	84	75.410	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.067	ENSHGLG00100015568	-	80	68.067	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028455	Mrps18c	93	70.492	ENSHGLG00100019678	-	83	70.492	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028455	Mrps18c	93	74.380	ENSSTOG00000007989	MRPS18C	83	74.380	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028455	Mrps18c	93	74.590	ENSLAFG00000001059	MRPS18C	83	74.590	Loxodonta_africana
MGP_SPRETEiJ_G0028455	Mrps18c	93	56.557	ENSMFAG00000041276	-	80	56.557	Macaca_fascicularis
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSMFAG00000003991	MRPS18C	83	76.230	Macaca_fascicularis
MGP_SPRETEiJ_G0028455	Mrps18c	93	63.115	ENSMMUG00000039146	-	82	63.115	Macaca_mulatta
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.033	ENSMMUG00000048717	-	83	68.033	Macaca_mulatta
MGP_SPRETEiJ_G0028455	Mrps18c	93	55.738	ENSMMUG00000015353	MRPS18C	79	55.738	Macaca_mulatta
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSMNEG00000043663	MRPS18C	83	76.230	Macaca_nemestrina
MGP_SPRETEiJ_G0028455	Mrps18c	93	53.279	ENSMNEG00000018700	-	79	53.279	Macaca_nemestrina
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSMLEG00000038884	MRPS18C	83	77.049	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSMICG00000032609	-	83	75.410	Microcebus_murinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	54.918	ENSMICG00000037615	-	79	54.918	Microcebus_murinus
MGP_SPRETEiJ_G0028455	Mrps18c	93	82.353	ENSMOCG00000009898	-	83	82.353	Microtus_ochrogaster
MGP_SPRETEiJ_G0028455	Mrps18c	93	84.874	ENSMOCG00000015591	-	83	84.874	Microtus_ochrogaster
MGP_SPRETEiJ_G0028455	Mrps18c	91	68.595	ENSMODG00000020773	MRPS18C	84	68.595	Monodelphis_domestica
MGP_SPRETEiJ_G0028455	Mrps18c	93	95.798	MGP_CAROLIEiJ_G0027458	Mrps18c	83	95.798	Mus_caroli
MGP_SPRETEiJ_G0028455	Mrps18c	100	96.875	ENSMUSG00000016833	Mrps18c	100	96.875	Mus_musculus
MGP_SPRETEiJ_G0028455	Mrps18c	93	97.479	MGP_PahariEiJ_G0017236	Mrps18c	83	97.479	Mus_pahari
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSMLUG00000017057	MRPS18C	83	75.410	Myotis_lucifugus
MGP_SPRETEiJ_G0028455	Mrps18c	83	80.189	ENSNGAG00000015980	Mrps18c	83	78.151	Nannospalax_galili
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.852	ENSNLEG00000018188	-	83	68.852	Nomascus_leucogenys
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSNLEG00000009119	MRPS18C	83	76.230	Nomascus_leucogenys
MGP_SPRETEiJ_G0028455	Mrps18c	77	73.000	ENSOPRG00000004113	MRPS18C	68	73.000	Ochotona_princeps
MGP_SPRETEiJ_G0028455	Mrps18c	97	70.866	ENSODEG00000007599	-	98	70.866	Octodon_degus
MGP_SPRETEiJ_G0028455	Mrps18c	93	72.951	ENSODEG00000020349	-	83	72.951	Octodon_degus
MGP_SPRETEiJ_G0028455	Mrps18c	93	73.770	ENSOARG00000002770	MRPS18C	83	73.770	Ovis_aries
MGP_SPRETEiJ_G0028455	Mrps18c	93	50.000	ENSPPAG00000037400	-	79	50.000	Pan_paniscus
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSPPAG00000037122	MRPS18C	83	77.049	Pan_paniscus
MGP_SPRETEiJ_G0028455	Mrps18c	93	78.689	ENSPPRG00000011089	MRPS18C	83	78.689	Panthera_pardus
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	ENSPTIG00000021242	MRPS18C	83	77.869	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028455	Mrps18c	93	48.361	ENSPTRG00000047058	-	78	48.361	Pan_troglodytes
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSPTRG00000016233	MRPS18C	83	77.049	Pan_troglodytes
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSPANG00000033931	MRPS18C	83	77.049	Papio_anubis
MGP_SPRETEiJ_G0028455	Mrps18c	93	63.115	ENSPANG00000034202	-	82	63.115	Papio_anubis
MGP_SPRETEiJ_G0028455	Mrps18c	93	81.513	ENSPEMG00000008390	Mrps18c	83	81.513	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028455	Mrps18c	69	69.318	ENSPCIG00000000097	-	62	69.318	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028455	Mrps18c	63	85.000	ENSPCIG00000019737	-	78	85.000	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028455	Mrps18c	93	65.833	ENSPCIG00000005376	-	84	65.833	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028455	Mrps18c	91	71.667	ENSPPYG00000025835	-	83	71.667	Pongo_abelii
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	ENSPPYG00000025867	MRPS18C	83	77.869	Pongo_abelii
MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	ENSPCAG00000004975	MRPS18C	83	75.410	Procavia_capensis
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	ENSPCOG00000017634	MRPS18C	83	77.869	Propithecus_coquereli
MGP_SPRETEiJ_G0028455	Mrps18c	77	75.248	ENSPVAG00000006439	MRPS18C	100	75.248	Pteropus_vampyrus
MGP_SPRETEiJ_G0028455	Mrps18c	93	90.756	ENSRNOG00000002178	Mrps18c	83	90.756	Rattus_norvegicus
MGP_SPRETEiJ_G0028455	Mrps18c	93	48.361	ENSRBIG00000031637	-	78	48.361	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSRBIG00000041685	MRPS18C	83	77.049	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.033	ENSRBIG00000035023	-	82	68.033	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028455	Mrps18c	93	68.033	ENSRROG00000033834	-	82	68.033	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028455	Mrps18c	93	47.541	ENSRROG00000030722	-	78	47.541	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	ENSRROG00000044334	MRPS18C	83	77.049	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	ENSSBOG00000027568	-	83	76.230	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028455	Mrps18c	92	68.595	ENSSBOG00000022205	-	77	68.595	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028455	Mrps18c	93	58.197	ENSSBOG00000029234	-	81	58.197	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028455	Mrps18c	92	55.932	ENSSBOG00000032292	-	79	58.036	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028455	Mrps18c	73	84.043	ENSSHAG00000007084	MRPS18C	65	84.043	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	ENSSSCG00000038042	MRPS18C	83	77.869	Sus_scrofa
MGP_SPRETEiJ_G0028455	Mrps18c	97	76.378	ENSTBEG00000012505	MRPS18C	87	76.378	Tupaia_belangeri
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.328	ENSTTRG00000004897	MRPS18C	83	80.328	Tursiops_truncatus
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.328	ENSUAMG00000012878	MRPS18C	83	80.328	Ursus_americanus
MGP_SPRETEiJ_G0028455	Mrps18c	93	80.328	ENSUMAG00000008829	MRPS18C	83	80.328	Ursus_maritimus
MGP_SPRETEiJ_G0028455	Mrps18c	93	78.689	ENSVPAG00000011358	MRPS18C	83	78.689	Vicugna_pacos
MGP_SPRETEiJ_G0028455	Mrps18c	93	79.508	ENSVVUG00000015672	MRPS18C	83	79.508	Vulpes_vulpes