EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0028479 (Gene tree)
Gene ID
-
Gene Symbol
BC005561
Alias
-
Full Name
cDNA sequence BC005561
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
14475 bases
Position
chr5:102689537-102704011
Accession
3040669
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0072102Tho2PF11262.83.8e-10011
MGP_SPRETEiJ_P0072102Thoc2PF11732.82.8e-3611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0072102-5413-MGP_SPRETEiJ_P00721021589 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0028479's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028479's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0028479BC0055619988.068MGP_SPRETEiJ_G0034181Thoc210089.279
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0028479BC0055619989.640ENSG00000125676THOC210090.088Homo_sapiens
MGP_SPRETEiJ_G0028479BC0055619971.294ENSAPOG00000003459thoc29971.213Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028479BC0055619989.160ENSAMEG00000014841THOC210089.606Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028479BC0055618871.520ENSACIG00000015022thoc29971.043Amphilophus_citrinellus
MGP_SPRETEiJ_G0028479BC0055619868.970ENSAOCG00000013305thoc29573.450Amphiprion_ocellaris
MGP_SPRETEiJ_G0028479BC0055619868.970ENSAPEG00000004792thoc29573.450Amphiprion_percula
MGP_SPRETEiJ_G0028479BC0055619970.455ENSATEG00000013110thoc29970.377Anabas_testudineus
MGP_SPRETEiJ_G0028479BC0055619582.697ENSAPLG00000010614THOC210082.829Anas_platyrhynchos
MGP_SPRETEiJ_G0028479BC0055619980.224ENSACAG00000011585THOC29981.032Anolis_carolinensis
MGP_SPRETEiJ_G0028479BC0055619985.958ENSANAG00000034037-9987.668Aotus_nancymaae
MGP_SPRETEiJ_G0028479BC0055619987.759ENSANAG00000022505-10088.519Aotus_nancymaae
MGP_SPRETEiJ_G0028479BC0055619569.226ENSACLG00000012036thoc210068.173Astatotilapia_calliptera
MGP_SPRETEiJ_G0028479BC0055619968.924ENSAMXG00000014184thoc29969.727Astyanax_mexicanus
MGP_SPRETEiJ_G0028479BC0055619989.517ENSBTAG00000008388THOC210090.088Bos_taurus
MGP_SPRETEiJ_G0028479BC0055619887.956ENSBTAG00000047341-9888.341Bos_taurus
MGP_SPRETEiJ_G0028479BC0055618732.741WBGene00015813thoc-28034.252Caenorhabditis_elegans
MGP_SPRETEiJ_G0028479BC0055619988.945ENSCJAG00000016157THOC210089.460Callithrix_jacchus
MGP_SPRETEiJ_G0028479BC0055619989.642ENSCAFG00000018574THOC210090.088Canis_familiaris
MGP_SPRETEiJ_G0028479BC0055619989.540ENSCAFG00020002284THOC29989.484Canis_lupus_dingo
MGP_SPRETEiJ_G0028479BC0055619989.527ENSCHIG00000017733-9989.470Capra_hircus
MGP_SPRETEiJ_G0028479BC0055619888.454ENSCHIG00000025851-9989.096Capra_hircus
MGP_SPRETEiJ_G0028479BC0055619987.760ENSTSYG00000012292THOC210087.672Carlito_syrichta
MGP_SPRETEiJ_G0028479BC0055619986.759ENSCPOG00000038670THOC29987.074Cavia_porcellus
MGP_SPRETEiJ_G0028479BC0055619989.450ENSCCAG00000021906THOC210089.962Cebus_capucinus
MGP_SPRETEiJ_G0028479BC0055619989.703ENSCATG00000003183THOC210090.151Cercocebus_atys
MGP_SPRETEiJ_G0028479BC0055619989.328ENSCLAG00000002641THOC210089.711Chinchilla_lanigera
MGP_SPRETEiJ_G0028479BC0055619989.703ENSCSAG00000018332THOC210090.151Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028479BC0055619881.567ENSCPBG00000012863THOC29985.860Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028479BC0055617557.347ENSCING00000007364-9957.179Ciona_intestinalis
MGP_SPRETEiJ_G0028479BC0055616258.284ENSCSAVG00000007923-10076.064Ciona_savignyi
MGP_SPRETEiJ_G0028479BC0055619989.703ENSCANG00000035077THOC210090.151Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028479BC0055619987.020ENSCGRG00001015509Thoc210087.115Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028479BC00556110093.770ENSCGRG00001009811BC0055619993.770Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028479BC0055619885.477ENSCGRG00000001226Thoc29986.317Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028479BC00556110093.833ENSCGRG00000000980BC00556110093.833Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028479BC0055618771.839ENSCSEG00000019946thoc210071.871Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028479BC0055619968.236ENSCVAG00000021509thoc29968.322Cyprinodon_variegatus
MGP_SPRETEiJ_G0028479BC0055619971.527ENSDARG00000037503thoc29971.402Danio_rerio
MGP_SPRETEiJ_G0028479BC0055619986.375ENSDNOG00000012487THOC210087.820Dasypus_novemcinctus
MGP_SPRETEiJ_G0028479BC0055619540.895FBgn0031390tho27546.209Drosophila_melanogaster
MGP_SPRETEiJ_G0028479BC0055618879.830ENSETEG00000016183THOC29179.813Echinops_telfairi
MGP_SPRETEiJ_G0028479BC0055619589.967ENSEASG00005017399THOC210090.429Equus_asinus_asinus
MGP_SPRETEiJ_G0028479BC0055619989.586ENSECAG00000010431THOC210090.140Equus_caballus
MGP_SPRETEiJ_G0028479BC0055617395.146ENSEEUG00000015598THOC27895.146Erinaceus_europaeus
MGP_SPRETEiJ_G0028479BC0055619073.050ENSELUG00000007778thoc29672.798Esox_lucius
MGP_SPRETEiJ_G0028479BC0055619989.391ENSFCAG00000008301THOC210089.962Felis_catus
MGP_SPRETEiJ_G0028479BC0055619980.645ENSFALG00000001519THOC29980.955Ficedula_albicollis
MGP_SPRETEiJ_G0028479BC0055619889.745ENSFDAG00000017237THOC210090.134Fukomys_damarensis
MGP_SPRETEiJ_G0028479BC0055619967.401ENSFHEG00000001695thoc29967.758Fundulus_heteroclitus
MGP_SPRETEiJ_G0028479BC0055619469.548ENSGMOG00000000069thoc29967.908Gadus_morhua
MGP_SPRETEiJ_G0028479BC0055619183.025ENSGALG00000008507THOC29882.957Gallus_gallus
MGP_SPRETEiJ_G0028479BC0055619769.658ENSGAFG00000005902thoc210069.032Gambusia_affinis
MGP_SPRETEiJ_G0028479BC0055619569.689ENSGACG00000020367thoc29968.588Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028479BC0055619882.522ENSGAGG00000024263THOC29982.843Gopherus_agassizii
MGP_SPRETEiJ_G0028479BC0055619989.640ENSGGOG00000000486THOC210090.088Gorilla_gorilla
MGP_SPRETEiJ_G0028479BC0055619272.746ENSHBUG00000003516thoc29872.497Haplochromis_burtoni
MGP_SPRETEiJ_G0028479BC0055619988.339ENSHGLG00000004222THOC210089.279Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028479BC0055619390.424ENSHGLG00100011595THOC29390.837Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028479BC0055619770.058ENSHCOG00000006276thoc29969.994Hippocampus_comes
MGP_SPRETEiJ_G0028479BC0055619970.784ENSIPUG00000015876thoc29970.721Ictalurus_punctatus
MGP_SPRETEiJ_G0028479BC0055619989.335ENSSTOG00000009134THOC210089.906Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028479BC0055619988.080ENSJJAG00000017282Thoc210089.154Jaculus_jaculus
MGP_SPRETEiJ_G0028479BC00556110087.814ENSJJAG00000008784BC00556110088.701Jaculus_jaculus
MGP_SPRETEiJ_G0028479BC0055619567.848ENSKMAG00000012263thoc29973.236Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028479BC0055619970.275ENSLBEG00000003049thoc29872.360Labrus_bergylta
MGP_SPRETEiJ_G0028479BC0055619879.244ENSLACG00000016494THOC29979.628Latimeria_chalumnae
MGP_SPRETEiJ_G0028479BC0055619976.181ENSLOCG00000014546thoc29976.356Lepisosteus_oculatus
MGP_SPRETEiJ_G0028479BC0055619988.952ENSLAFG00000003146THOC210089.523Loxodonta_africana
MGP_SPRETEiJ_G0028479BC0055619989.703ENSMFAG00000042215THOC210090.151Macaca_fascicularis
MGP_SPRETEiJ_G0028479BC0055619989.703ENSMMUG00000003745THOC210090.151Macaca_mulatta
MGP_SPRETEiJ_G0028479BC0055619989.703ENSMNEG00000033627THOC210090.151Macaca_nemestrina
MGP_SPRETEiJ_G0028479BC0055619989.703ENSMLEG00000034817THOC210090.151Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028479BC0055619570.735ENSMAMG00000012993thoc29574.884Mastacembelus_armatus
MGP_SPRETEiJ_G0028479BC0055619971.357ENSMZEG00005015842thoc29971.087Maylandia_zebra
MGP_SPRETEiJ_G0028479BC0055619881.714ENSMGAG00000007345THOC210081.853Meleagris_gallopavo
MGP_SPRETEiJ_G0028479BC0055619988.194ENSMAUG00000002356Thoc210088.840Mesocricetus_auratus
MGP_SPRETEiJ_G0028479BC0055619988.638ENSMICG00000011840THOC210090.025Microcebus_murinus
MGP_SPRETEiJ_G0028479BC0055619987.892ENSMOCG00000009946Thoc210088.715Microtus_ochrogaster
MGP_SPRETEiJ_G0028479BC00556110093.266ENSMOCG00000019406BC00556110093.266Microtus_ochrogaster
MGP_SPRETEiJ_G0028479BC0055619868.742ENSMMOG00000016313thoc29672.720Mola_mola
MGP_SPRETEiJ_G0028479BC0055619980.337ENSMODG00000014984THOC29981.149Monodelphis_domestica
MGP_SPRETEiJ_G0028479BC0055619868.371ENSMALG00000019718thoc29967.586Monopterus_albus
MGP_SPRETEiJ_G0028479BC00556110099.308MGP_CAROLIEiJ_G0027482BC00556110099.308Mus_caroli
MGP_SPRETEiJ_G0028479BC0055619987.942MGP_CAROLIEiJ_G0033023Thoc210089.154Mus_caroli
MGP_SPRETEiJ_G0028479BC00556110099.874ENSMUSG00000079065BC00556110099.874Mus_musculus
MGP_SPRETEiJ_G0028479BC0055619988.068ENSMUSG00000037475Thoc210089.279Mus_musculus
MGP_SPRETEiJ_G0028479BC0055619988.068MGP_PahariEiJ_G0031569Thoc210089.279Mus_pahari
MGP_SPRETEiJ_G0028479BC00556110097.357MGP_PahariEiJ_G0017260BC00556110097.357Mus_pahari
MGP_SPRETEiJ_G0028479BC0055619989.194ENSMPUG00000001357THOC210089.638Mustela_putorius_furo
MGP_SPRETEiJ_G0028479BC0055619579.402ENSMLUG00000026072-10079.601Myotis_lucifugus
MGP_SPRETEiJ_G0028479BC0055619888.938ENSMLUG00000013656-10089.962Myotis_lucifugus
MGP_SPRETEiJ_G0028479BC0055619475.584ENSMLUG00000028256-9975.284Myotis_lucifugus
MGP_SPRETEiJ_G0028479BC0055619085.542ENSMLUG00000027559-9985.652Myotis_lucifugus
MGP_SPRETEiJ_G0028479BC00556110090.389ENSNGAG00000010936BC00556110090.264Nannospalax_galili
MGP_SPRETEiJ_G0028479BC0055619987.812ENSNGAG00000016184Thoc210088.382Nannospalax_galili
MGP_SPRETEiJ_G0028479BC0055619071.458ENSNBRG00000018089thoc29971.171Neolamprologus_brichardi
MGP_SPRETEiJ_G0028479BC0055619983.292ENSNLEG00000015055THOC210083.925Nomascus_leucogenys
MGP_SPRETEiJ_G0028479BC0055618284.104ENSMEUG00000003533THOC28184.104Notamacropus_eugenii
MGP_SPRETEiJ_G0028479BC0055619989.268ENSODEG00000002478THOC210089.655Octodon_degus
MGP_SPRETEiJ_G0028479BC0055619971.455ENSONIG00000004348thoc29971.186Oreochromis_niloticus
MGP_SPRETEiJ_G0028479BC0055619781.742ENSOANG00000004054THOC210082.832Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028479BC0055619988.763ENSOCUG00000005996THOC210089.335Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028479BC0055619970.226ENSORLG00000008692thoc29970.101Oryzias_latipes
MGP_SPRETEiJ_G0028479BC0055619968.005ENSORLG00020002321thoc29374.419Oryzias_latipes_hni
MGP_SPRETEiJ_G0028479BC0055619969.033ENSORLG00015000665thoc29871.744Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028479BC0055619970.095ENSOMEG00000004006thoc29969.508Oryzias_melastigma
MGP_SPRETEiJ_G0028479BC0055619988.449ENSOGAG00000000302THOC210089.900Otolemur_garnettii
MGP_SPRETEiJ_G0028479BC0055619889.675ENSOARG00000013665-10090.255Ovis_aries
MGP_SPRETEiJ_G0028479BC0055617692.063ENSOARG00000003614-9692.063Ovis_aries
MGP_SPRETEiJ_G0028479BC0055619987.225ENSPPAG00000040720THOC29990.791Pan_paniscus
MGP_SPRETEiJ_G0028479BC0055619989.328ENSPPRG00000023137THOC210089.900Panthera_pardus
MGP_SPRETEiJ_G0028479BC0055619987.633ENSPTIG00000006983THOC210087.257Panthera_tigris_altaica
MGP_SPRETEiJ_G0028479BC0055619989.517ENSPTRG00000022246THOC210090.151Pan_troglodytes
MGP_SPRETEiJ_G0028479BC0055619887.031ENSPANG00000004038THOC210087.492Papio_anubis
MGP_SPRETEiJ_G0028479BC0055619374.481ENSPKIG00000021719thoc29475.084Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028479BC0055619981.569ENSPSIG00000015352THOC29882.192Pelodiscus_sinensis
MGP_SPRETEiJ_G0028479BC0055619866.560ENSPMGG00000002688thoc29966.816Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028479BC0055619987.886ENSPEMG00000007626Thoc210088.534Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028479BC00556110094.399ENSPEMG00000011125BC00556110094.399Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028479BC0055619961.963ENSPMAG00000007219-9973.023Petromyzon_marinus
MGP_SPRETEiJ_G0028479BC0055616286.727ENSPCIG00000007574THOC29987.849Phascolarctos_cinereus
MGP_SPRETEiJ_G0028479BC0055619969.949ENSPFOG00000019556thoc29969.785Poecilia_formosa
MGP_SPRETEiJ_G0028479BC0055619968.507ENSPLAG00000005761thoc29968.299Poecilia_latipinna
MGP_SPRETEiJ_G0028479BC0055619968.484ENSPMEG00000002951thoc29968.362Poecilia_mexicana
MGP_SPRETEiJ_G0028479BC0055619970.440ENSPREG00000021746thoc29970.126Poecilia_reticulata
MGP_SPRETEiJ_G0028479BC0055619989.640ENSPPYG00000020695THOC210090.088Pongo_abelii
MGP_SPRETEiJ_G0028479BC0055619975.987ENSPCAG00000005402THOC210076.113Procavia_capensis
MGP_SPRETEiJ_G0028479BC0055619985.220ENSPCOG00000001806THOC29986.675Propithecus_coquereli
MGP_SPRETEiJ_G0028479BC0055619988.449ENSPVAG00000006132THOC210089.021Pteropus_vampyrus
MGP_SPRETEiJ_G0028479BC0055619569.448ENSPNYG00000019622thoc210068.390Pundamilia_nyererei
MGP_SPRETEiJ_G0028479BC0055619967.481ENSPNAG00000020593thoc29967.421Pygocentrus_nattereri
MGP_SPRETEiJ_G0028479BC0055619997.353ENSRNOG00000042340LOC67989410097.353Rattus_norvegicus
MGP_SPRETEiJ_G0028479BC0055619988.519ENSRNOG00000007315Thoc210089.342Rattus_norvegicus
MGP_SPRETEiJ_G0028479BC0055619278.193ENSRBIG00000044129THOC29886.667Rhinopithecus_bieti
MGP_SPRETEiJ_G0028479BC0055619989.703ENSRROG00000041515THOC210090.151Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028479BC0055619989.387ENSSBOG00000007245THOC210089.962Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028479BC0055619880.762ENSSHAG00000015987THOC210081.524Sarcophilus_harrisii
MGP_SPRETEiJ_G0028479BC0055619975.142ENSSFOG00015004767THOC29975.016Scleropages_formosus
MGP_SPRETEiJ_G0028479BC0055619972.682ENSSFOG00015010127thoc29876.042Scleropages_formosus
MGP_SPRETEiJ_G0028479BC0055619970.710ENSSMAG00000016574thoc29970.820Scophthalmus_maximus
MGP_SPRETEiJ_G0028479BC0055619971.420ENSSDUG00000012815thoc29972.500Seriola_dumerili
MGP_SPRETEiJ_G0028479BC0055619971.231ENSSLDG00000015816thoc29971.464Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028479BC0055619583.322ENSSARG00000005799THOC210084.058Sorex_araneus
MGP_SPRETEiJ_G0028479BC0055619981.266ENSSPUG00000012889THOC210081.700Sphenodon_punctatus
MGP_SPRETEiJ_G0028479BC0055618175.231ENSSPAG00000023593thoc29174.692Stegastes_partitus
MGP_SPRETEiJ_G0028479BC0055619989.196ENSSSCG00000012639THOC210090.213Sus_scrofa
MGP_SPRETEiJ_G0028479BC0055619282.801ENSTGUG00000003682THOC210083.209Taeniopygia_guttata
MGP_SPRETEiJ_G0028479BC0055619969.027ENSTRUG00000015122thoc29968.829Takifugu_rubripes
MGP_SPRETEiJ_G0028479BC0055619469.128ENSTNIG00000011794thoc29769.185Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028479BC0055615693.388ENSTBEG00000005854-6093.388Tupaia_belangeri
MGP_SPRETEiJ_G0028479BC0055618283.397ENSTBEG00000004420-10084.037Tupaia_belangeri
MGP_SPRETEiJ_G0028479BC0055619982.560ENSTTRG00000002762THOC210084.719Tursiops_truncatus
MGP_SPRETEiJ_G0028479BC0055619989.527ENSUAMG00000008780THOC29989.815Ursus_americanus
MGP_SPRETEiJ_G0028479BC0055619679.349ENSUMAG00000024014THOC29887.325Ursus_maritimus
MGP_SPRETEiJ_G0028479BC0055619889.611ENSVPAG00000006247THOC210090.191Vicugna_pacos
MGP_SPRETEiJ_G0028479BC0055619989.527ENSVVUG00000028282THOC29989.470Vulpes_vulpes
MGP_SPRETEiJ_G0028479BC0055619976.095ENSXETG00000016195thoc29988.274Xenopus_tropicalis
MGP_SPRETEiJ_G0028479BC0055619769.176ENSXCOG00000006301thoc210068.899Xiphophorus_couchianus
MGP_SPRETEiJ_G0028479BC0055619769.221ENSXMAG00000011604thoc29970.555Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us