EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0028549 (Gene tree)
Gene ID
-
Gene Symbol
Pus1
Alias
A730013B20Rik|MPUS1|mPus1p
Full Name
pseudouridine synthase 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
7142 bases
Position
chr5:109228963-109236104
Accession
1929237
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0072451PseudoU_synth_1PF01416.201.1e-1411
MGP_SPRETEiJ_P0072453PseudoU_synth_1PF01416.201.1e-1411
MGP_SPRETEiJ_P0072450PseudoU_synth_1PF01416.201.3e-1411
MGP_SPRETEiJ_P0072449PseudoU_synth_1PF01416.201.9e-1311
MGP_SPRETEiJ_P0072452PseudoU_synth_1PF01416.202.7e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0072455-527-MGP_SPRETEiJ_P0072455162 (aa)--
MGP_SPRETEiJ_T0072454-695-MGP_SPRETEiJ_P0072454147 (aa)-UPI00015AA2D1
MGP_SPRETEiJ_T0072453-1512-MGP_SPRETEiJ_P0072453393 (aa)-UPI00000009B0
MGP_SPRETEiJ_T0072452-1870-MGP_SPRETEiJ_P0072452441 (aa)--
MGP_SPRETEiJ_T0072451-1565-MGP_SPRETEiJ_P0072451393 (aa)-UPI00000009B0
MGP_SPRETEiJ_T0072450-1816-MGP_SPRETEiJ_P0072450423 (aa)-UPI0000562728
MGP_SPRETEiJ_T0072449-1386-MGP_SPRETEiJ_P0072449347 (aa)-UPI00001F23F3
Gene Model
Click here to download MGP_SPRETEiJ_G0028549's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028549's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0028549Pus110086.466ENSG00000177192PUS110086.466Homo_sapiens
MGP_SPRETEiJ_G0028549Pus19368.022ENSAPOG00000007254pus18768.022Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028549Pus19982.864ENSAMEG00000013715PUS110079.810Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028549Pus18968.715ENSACIG00000009169pus18768.715Amphilophus_citrinellus
MGP_SPRETEiJ_G0028549Pus19269.672ENSAOCG00000022207pus18769.672Amphiprion_ocellaris
MGP_SPRETEiJ_G0028549Pus18971.510ENSAPEG00000006039pus19071.510Amphiprion_percula
MGP_SPRETEiJ_G0028549Pus18969.231ENSATEG00000020688pus19069.231Anabas_testudineus
MGP_SPRETEiJ_G0028549Pus18878.324ENSACAG00000007367PUS19378.324Anolis_carolinensis
MGP_SPRETEiJ_G0028549Pus18391.104ENSANAG00000036192PUS110091.104Aotus_nancymaae
MGP_SPRETEiJ_G0028549Pus19368.564ENSACLG00000020868pus19468.564Astatotilapia_calliptera
MGP_SPRETEiJ_G0028549Pus18872.046ENSAMXG00000008710pus18172.046Astyanax_mexicanus
MGP_SPRETEiJ_G0028549Pus110082.750ENSBTAG00000012990PUS110082.750Bos_taurus
MGP_SPRETEiJ_G0028549Pus18538.040WBGene00004248pus-18238.040Caenorhabditis_elegans
MGP_SPRETEiJ_G0028549Pus17491.860ENSCJAG00000003720PUS17490.775Callithrix_jacchus
MGP_SPRETEiJ_G0028549Pus19980.846ENSCAFG00000006429PUS110080.905Canis_familiaris
MGP_SPRETEiJ_G0028549Pus19880.905ENSCAFG00020010737PUS110077.726Canis_lupus_dingo
MGP_SPRETEiJ_G0028549Pus110083.797ENSCHIG00000000487PUS110082.750Capra_hircus
MGP_SPRETEiJ_G0028549Pus19488.076ENSTSYG00000032605PUS110088.076Carlito_syrichta
MGP_SPRETEiJ_G0028549Pus17692.282ENSCAPG00000006421PUS110088.889Cavia_aperea
MGP_SPRETEiJ_G0028549Pus19984.304ENSCPOG00000001027PUS110084.928Cavia_porcellus
MGP_SPRETEiJ_G0028549Pus110084.500ENSCCAG00000015879PUS110081.628Cebus_capucinus
MGP_SPRETEiJ_G0028549Pus110086.717ENSCATG00000032870PUS19985.036Cercocebus_atys
MGP_SPRETEiJ_G0028549Pus15030.102ENSCLAG00000005232PUSL16330.208Chinchilla_lanigera
MGP_SPRETEiJ_G0028549Pus19985.063ENSCLAG00000011689PUS110084.814Chinchilla_lanigera
MGP_SPRETEiJ_G0028549Pus110087.218ENSCSAG00000001879PUS19985.511Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028549Pus17980.645ENSCPBG00000024715PUS19377.711Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028549Pus19043.855ENSCING00000009426-9543.855Ciona_intestinalis
MGP_SPRETEiJ_G0028549Pus18243.478ENSCSAVG00000003751-6643.478Ciona_savignyi
MGP_SPRETEiJ_G0028549Pus110078.446ENSCANG00000035561PUS19978.446Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028549Pus110095.674ENSCGRG00001019592Pus110095.508Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028549Pus110095.674ENSCGRG00000004048Pus110095.674Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028549Pus19168.245ENSCSEG00000003629pus19264.872Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028549Pus19368.120ENSCVAG00000001265pus18968.120Cyprinodon_variegatus
MGP_SPRETEiJ_G0028549Pus16730.195ENSDARG00000028976pus36030.195Danio_rerio
MGP_SPRETEiJ_G0028549Pus18967.816ENSDARG00000045562pus19967.626Danio_rerio
MGP_SPRETEiJ_G0028549Pus19379.508ENSDNOG00000045576PUS19882.298Dasypus_novemcinctus
MGP_SPRETEiJ_G0028549Pus18394.479ENSDORG00000011455Pus110094.479Dipodomys_ordii
MGP_SPRETEiJ_G0028549Pus19045.634FBgn0038811PUS18445.634Drosophila_melanogaster
MGP_SPRETEiJ_G0028549Pus19080.112ENSETEG00000019160PUS110074.217Echinops_telfairi
MGP_SPRETEiJ_G0028549Pus18143.440ENSEBUG00000000368-6343.440Eptatretus_burgeri
MGP_SPRETEiJ_G0028549Pus110084.080ENSEASG00005016535PUS110081.609Equus_asinus_asinus
MGP_SPRETEiJ_G0028549Pus110084.577ENSECAG00000006965PUS110084.577Equus_caballus
MGP_SPRETEiJ_G0028549Pus15130.500ENSECAG00000006248PUSL17330.131Equus_caballus
MGP_SPRETEiJ_G0028549Pus18870.977ENSELUG00000010424pus18970.977Esox_lucius
MGP_SPRETEiJ_G0028549Pus19980.964ENSFCAG00000010780PUS19778.846Felis_catus
MGP_SPRETEiJ_G0028549Pus19379.032ENSFALG00000008273PUS18779.032Ficedula_albicollis
MGP_SPRETEiJ_G0028549Pus19488.472ENSFDAG00000012518PUS110084.397Fukomys_damarensis
MGP_SPRETEiJ_G0028549Pus19368.392ENSFHEG00000010504pus18868.392Fundulus_heteroclitus
MGP_SPRETEiJ_G0028549Pus19265.746ENSGMOG00000008143pus19763.613Gadus_morhua
MGP_SPRETEiJ_G0028549Pus19876.471ENSGALG00000002354PUS19576.471Gallus_gallus
MGP_SPRETEiJ_G0028549Pus19368.120ENSGAFG00000006578pus18868.120Gambusia_affinis
MGP_SPRETEiJ_G0028549Pus19363.889ENSGACG00000017566pus110063.889Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028549Pus18972.934ENSGAGG00000016730-9476.506Gopherus_agassizii
MGP_SPRETEiJ_G0028549Pus110086.216ENSGGOG00000009178PUS19984.561Gorilla_gorilla
MGP_SPRETEiJ_G0028549Pus19368.835ENSHBUG00000001316pus19468.835Haplochromis_burtoni
MGP_SPRETEiJ_G0028549Pus19984.399ENSHGLG00000016086PUS110084.399Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028549Pus19983.887ENSHGLG00100019362PUS110083.887Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028549Pus18770.725ENSHCOG00000014288pus18070.725Hippocampus_comes
MGP_SPRETEiJ_G0028549Pus18873.333ENSIPUG00000010387pus18773.333Ictalurus_punctatus
MGP_SPRETEiJ_G0028549Pus19789.817ENSSTOG00000011245PUS19988.416Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028549Pus110091.094ENSJJAG00000000088Pus110090.490Jaculus_jaculus
MGP_SPRETEiJ_G0028549Pus19367.302ENSKMAG00000012702pus18867.302Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028549Pus19366.129ENSLBEG00000002845pus19266.129Labrus_bergylta
MGP_SPRETEiJ_G0028549Pus18257.632ENSLACG00000016044-9757.632Latimeria_chalumnae
MGP_SPRETEiJ_G0028549Pus18976.000ENSLACG00000018598PUS19273.046Latimeria_chalumnae
MGP_SPRETEiJ_G0028549Pus19871.762ENSLOCG00000006127pus19771.762Lepisosteus_oculatus
MGP_SPRETEiJ_G0028549Pus19481.132ENSLAFG00000028731PUS110081.132Loxodonta_africana
MGP_SPRETEiJ_G0028549Pus110087.218ENSMFAG00000041194PUS19987.218Macaca_fascicularis
MGP_SPRETEiJ_G0028549Pus110085.000ENSMMUG00000031463PUS19986.979Macaca_mulatta
MGP_SPRETEiJ_G0028549Pus110086.967ENSMNEG00000002814PUS19985.273Macaca_nemestrina
MGP_SPRETEiJ_G0028549Pus18392.025ENSMLEG00000043560PUS110092.025Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028549Pus18769.883ENSMAMG00000007371pus18169.883Mastacembelus_armatus
MGP_SPRETEiJ_G0028549Pus19368.835ENSMZEG00005017746pus18768.835Maylandia_zebra
MGP_SPRETEiJ_G0028549Pus18381.155ENSMGAG00000001958PUS110081.155Meleagris_gallopavo
MGP_SPRETEiJ_G0028549Pus16330.337ENSMGAG00000000851PUS36330.337Meleagris_gallopavo
MGP_SPRETEiJ_G0028549Pus110095.674ENSMAUG00000001482Pus110095.508Mesocricetus_auratus
MGP_SPRETEiJ_G0028549Pus110083.871ENSMICG00000030980PUS110083.871Microcebus_murinus
MGP_SPRETEiJ_G0028549Pus110096.183ENSMOCG00000022311Pus110095.981Microtus_ochrogaster
MGP_SPRETEiJ_G0028549Pus19467.209ENSMMOG00000021022pus19467.209Mola_mola
MGP_SPRETEiJ_G0028549Pus19578.515ENSMODG00000015551PUS19472.131Monodelphis_domestica
MGP_SPRETEiJ_G0028549Pus19267.956ENSMALG00000013202pus18767.956Monopterus_albus
MGP_SPRETEiJ_G0028549Pus1100100.000MGP_CAROLIEiJ_G0027551Pus1100100.000Mus_caroli
MGP_SPRETEiJ_G0028549Pus1100100.000ENSMUSG00000029507Pus1100100.000Mus_musculus
MGP_SPRETEiJ_G0028549Pus110099.237MGP_PahariEiJ_G0024133Pus110099.237Mus_pahari
MGP_SPRETEiJ_G0028549Pus19981.658ENSMPUG00000002314PUS110081.658Mustela_putorius_furo
MGP_SPRETEiJ_G0028549Pus19085.795ENSMLUG00000015790PUS19685.795Myotis_lucifugus
MGP_SPRETEiJ_G0028549Pus110096.429ENSNGAG00000012976Pus110092.795Nannospalax_galili
MGP_SPRETEiJ_G0028549Pus19070.056ENSNBRG00000020502pus19470.571Neolamprologus_brichardi
MGP_SPRETEiJ_G0028549Pus19588.064ENSNLEG00000008505PUS110093.060Nomascus_leucogenys
MGP_SPRETEiJ_G0028549Pus19370.685ENSMEUG00000002825PUS19870.685Notamacropus_eugenii
MGP_SPRETEiJ_G0028549Pus19574.801ENSOPRG00000002701-9974.801Ochotona_princeps
MGP_SPRETEiJ_G0028549Pus19984.439ENSODEG00000008248PUS19787.634Octodon_degus
MGP_SPRETEiJ_G0028549Pus19367.647ENSONIG00000003803pus19367.647Oreochromis_niloticus
MGP_SPRETEiJ_G0028549Pus19177.961ENSOANG00000010619PUS19671.942Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028549Pus19384.946ENSOCUG00000007310PUS18484.197Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028549Pus18871.098ENSORLG00000010787pus18569.972Oryzias_latipes
MGP_SPRETEiJ_G0028549Pus18871.676ENSORLG00020011483pus18570.538Oryzias_latipes_hni
MGP_SPRETEiJ_G0028549Pus18871.965ENSORLG00015023012pus19170.822Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028549Pus18870.809ENSOMEG00000022655pus18170.809Oryzias_melastigma
MGP_SPRETEiJ_G0028549Pus19686.945ENSOGAG00000008720PUS19986.945Otolemur_garnettii
MGP_SPRETEiJ_G0028549Pus110082.500ENSOARG00000013316PUS110079.908Ovis_aries
MGP_SPRETEiJ_G0028549Pus110086.216ENSPPAG00000040971PUS19984.561Pan_paniscus
MGP_SPRETEiJ_G0028549Pus110080.000ENSPPRG00000015456PUS110080.000Panthera_pardus
MGP_SPRETEiJ_G0028549Pus18785.965ENSPTIG00000004201PUS19284.746Panthera_tigris_altaica
MGP_SPRETEiJ_G0028549Pus110085.714ENSPTRG00000005643PUS19984.086Pan_troglodytes
MGP_SPRETEiJ_G0028549Pus110086.717ENSPANG00000000376PUS19985.036Papio_anubis
MGP_SPRETEiJ_G0028549Pus18873.563ENSPKIG00000019369pus19166.915Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028549Pus15030.256ENSPSIG00000002781PUSL17130.256Pelodiscus_sinensis
MGP_SPRETEiJ_G0028549Pus18877.937ENSPSIG00000016432PUS18675.881Pelodiscus_sinensis
MGP_SPRETEiJ_G0028549Pus18769.591ENSPMGG00000004522pus18969.591Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028549Pus110097.201ENSPEMG00000013448Pus110096.927Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028549Pus18360.550ENSPMAG00000004636pus19960.550Petromyzon_marinus
MGP_SPRETEiJ_G0028549Pus18077.174ENSPCIG00000022609-7570.032Phascolarctos_cinereus
MGP_SPRETEiJ_G0028549Pus19367.575ENSPFOG00000019669pus18867.575Poecilia_formosa
MGP_SPRETEiJ_G0028549Pus19367.575ENSPLAG00000002692-8867.575Poecilia_latipinna
MGP_SPRETEiJ_G0028549Pus19367.575ENSPLAG00000007185pus18867.575Poecilia_latipinna
MGP_SPRETEiJ_G0028549Pus19367.575ENSPMEG00000006038pus19167.575Poecilia_mexicana
MGP_SPRETEiJ_G0028549Pus19367.575ENSPMEG00000011115PUS18867.575Poecilia_mexicana
MGP_SPRETEiJ_G0028549Pus19367.575ENSPREG00000007231pus19968.347Poecilia_reticulata
MGP_SPRETEiJ_G0028549Pus110086.869ENSPPYG00000005132PUS19984.928Pongo_abelii
MGP_SPRETEiJ_G0028549Pus17579.310ENSPCAG00000009110-6479.310Procavia_capensis
MGP_SPRETEiJ_G0028549Pus110078.500ENSPCOG00000015595PUS110078.500Propithecus_coquereli
MGP_SPRETEiJ_G0028549Pus19368.564ENSPNYG00000013571pus18768.564Pundamilia_nyererei
MGP_SPRETEiJ_G0028549Pus18873.121ENSPNAG00000003938pus18273.121Pygocentrus_nattereri
MGP_SPRETEiJ_G0028549Pus110098.728ENSRNOG00000037500Pus110098.582Rattus_norvegicus
MGP_SPRETEiJ_G0028549Pus110087.218ENSRBIG00000043177PUS110087.218Rhinopithecus_bieti
MGP_SPRETEiJ_G0028549Pus110086.717ENSRROG00000039744PUS19985.036Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028549Pus18644.697YPL212C-6044.697Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028549Pus110085.500ENSSBOG00000023593PUS110085.500Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028549Pus19877.494ENSSHAG00000013193PUS19576.607Sarcophilus_harrisii
MGP_SPRETEiJ_G0028549Pus19273.626ENSSFOG00015003463pus18273.626Scleropages_formosus
MGP_SPRETEiJ_G0028549Pus18770.145ENSSMAG00000019075pus18766.667Scophthalmus_maximus
MGP_SPRETEiJ_G0028549Pus19268.579ENSSDUG00000007102pus18967.560Seriola_dumerili
MGP_SPRETEiJ_G0028549Pus19268.033ENSSLDG00000022850pus18967.024Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028549Pus17776.645ENSSARG00000008367PUS19876.645Sorex_araneus
MGP_SPRETEiJ_G0028549Pus19476.676ENSSPUG00000010009PUS19376.676Sphenodon_punctatus
MGP_SPRETEiJ_G0028549Pus18672.271ENSSPAG00000006272pus18672.271Stegastes_partitus
MGP_SPRETEiJ_G0028549Pus110082.750ENSSSCG00000009741PUS110082.750Sus_scrofa
MGP_SPRETEiJ_G0028549Pus18483.030ENSTGUG00000008068PUS110083.030Taeniopygia_guttata
MGP_SPRETEiJ_G0028549Pus18969.014ENSTRUG00000002198pus19168.927Takifugu_rubripes
MGP_SPRETEiJ_G0028549Pus19167.403ENSTNIG00000003942pus19267.680Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028549Pus19981.612ENSTTRG00000000632PUS19980.430Tursiops_truncatus
MGP_SPRETEiJ_G0028549Pus19982.412ENSUAMG00000017197PUS110082.412Ursus_americanus
MGP_SPRETEiJ_G0028549Pus19584.182ENSUMAG00000002831PUS110087.798Ursus_maritimus
MGP_SPRETEiJ_G0028549Pus19981.266ENSVVUG00000004199PUS19380.542Vulpes_vulpes
MGP_SPRETEiJ_G0028549Pus19271.389ENSXETG00000002030pus19071.389Xenopus_tropicalis
MGP_SPRETEiJ_G0028549Pus18150.467ENSXETG00000033640-10050.467Xenopus_tropicalis
MGP_SPRETEiJ_G0028549Pus19368.033ENSXCOG00000004722pus19568.033Xiphophorus_couchianus
MGP_SPRETEiJ_G0028549Pus19367.847ENSXMAG00000000988pus18867.847Xiphophorus_maculatus

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