EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028578 (Gene tree)
Gene ID: -
Gene Symbol: Sart3
Alias: -
Full Name: squamous cell carcinoma antigen recognized by T cells 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 31096 bases
Position: chr5:112389215-112420310
Accession: 1858230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0072585	Lsm_interact	PF05391.11	5.8e-06	1	1
MGP_SPRETEiJ_P0072585	RRM_1	PF00076.22	2.6e-32	1	2
MGP_SPRETEiJ_P0072585	RRM_1	PF00076.22	2.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0072589	-	525	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072588	-	744	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072585	-	4434	-	MGP_SPRETEiJ_P0072585	962 (aa)	-	-
MGP_SPRETEiJ_T0072584	-	2242	-	MGP_SPRETEiJ_P0072584	683 (aa)	-	-
MGP_SPRETEiJ_T0072587	-	607	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072586	-	3262	-	MGP_SPRETEiJ_P0072586	401 (aa)	-	-
MGP_SPRETEiJ_T0072590	-	629	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072591	-	510	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028578	Sart3	100	86.826	ENSG00000075856	SART3	99	95.455	Homo_sapiens
MGP_SPRETEiJ_G0028578	Sart3	90	63.140	ENSAPOG00000007242	sart3	94	62.912	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028578	Sart3	98	87.144	ENSAMEG00000016374	SART3	100	86.929	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028578	Sart3	90	64.739	ENSACIG00000016452	sart3	96	62.951	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028578	Sart3	90	63.326	ENSAOCG00000015094	sart3	94	63.039	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028578	Sart3	90	62.984	ENSAPEG00000023696	sart3	94	62.698	Amphiprion_percula
MGP_SPRETEiJ_G0028578	Sart3	90	59.842	ENSATEG00000009882	sart3	96	62.271	Anabas_testudineus
MGP_SPRETEiJ_G0028578	Sart3	76	87.654	ENSAPLG00000006205	SART3	97	70.440	Anas_platyrhynchos
MGP_SPRETEiJ_G0028578	Sart3	85	84.146	ENSACAG00000001176	SART3	94	66.738	Anolis_carolinensis
MGP_SPRETEiJ_G0028578	Sart3	100	86.929	ENSANAG00000025967	SART3	100	86.929	Aotus_nancymaae
MGP_SPRETEiJ_G0028578	Sart3	90	63.596	ENSACLG00000025832	sart3	96	61.777	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028578	Sart3	92	61.227	ENSAMXG00000019143	sart3	92	61.607	Astyanax_mexicanus
MGP_SPRETEiJ_G0028578	Sart3	98	85.142	ENSBTAG00000031846	SART3	100	84.959	Bos_taurus
MGP_SPRETEiJ_G0028578	Sart3	100	85.234	ENSCJAG00000015330	SART3	100	85.234	Callithrix_jacchus
MGP_SPRETEiJ_G0028578	Sart3	100	86.826	ENSCAFG00000011352	SART3	89	86.826	Canis_familiaris
MGP_SPRETEiJ_G0028578	Sart3	100	86.826	ENSCAFG00020022271	SART3	100	86.826	Canis_lupus_dingo
MGP_SPRETEiJ_G0028578	Sart3	98	86.296	ENSCHIG00000021385	SART3	100	83.096	Capra_hircus
MGP_SPRETEiJ_G0028578	Sart3	100	85.581	ENSTSYG00000013923	SART3	100	85.581	Carlito_syrichta
MGP_SPRETEiJ_G0028578	Sart3	89	88.708	ENSCAPG00000013404	SART3	99	88.824	Cavia_aperea
MGP_SPRETEiJ_G0028578	Sart3	100	86.826	ENSCPOG00000010969	SART3	100	86.929	Cavia_porcellus
MGP_SPRETEiJ_G0028578	Sart3	100	87.241	ENSCCAG00000023667	SART3	100	87.241	Cebus_capucinus
MGP_SPRETEiJ_G0028578	Sart3	100	85.845	ENSCATG00000041537	SART3	100	85.845	Cercocebus_atys
MGP_SPRETEiJ_G0028578	Sart3	100	87.448	ENSCLAG00000011727	SART3	100	87.448	Chinchilla_lanigera
MGP_SPRETEiJ_G0028578	Sart3	100	87.448	ENSCSAG00000002880	SART3	100	87.448	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028578	Sart3	84	75.845	ENSCPBG00000006699	SART3	92	75.390	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028578	Sart3	90	39.709	ENSCING00000009762	-	98	39.709	Ciona_intestinalis
MGP_SPRETEiJ_G0028578	Sart3	100	85.743	ENSCANG00000000411	SART3	100	85.743	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028578	Sart3	100	93.763	ENSCGRG00001020554	Sart3	100	93.763	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028578	Sart3	85	95.086	ENSCGRG00000005968	Sart3	100	95.086	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028578	Sart3	60	61.631	ENSCSEG00000011951	sart3	69	61.774	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028578	Sart3	90	62.514	ENSCVAG00000022898	sart3	94	62.639	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028578	Sart3	90	61.479	ENSDARG00000008032	sart3	94	61.963	Danio_rerio
MGP_SPRETEiJ_G0028578	Sart3	98	83.665	ENSDNOG00000019498	SART3	100	83.299	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028578	Sart3	94	82.694	ENSDORG00000014360	Sart3	100	80.330	Dipodomys_ordii
MGP_SPRETEiJ_G0028578	Sart3	59	39.706	FBgn0014024	Rnp4F	52	39.706	Drosophila_melanogaster
MGP_SPRETEiJ_G0028578	Sart3	66	92.258	ENSETEG00000011292	SART3	78	92.258	Echinops_telfairi
MGP_SPRETEiJ_G0028578	Sart3	93	37.712	ENSEBUG00000005658	sart3	92	38.184	Eptatretus_burgeri
MGP_SPRETEiJ_G0028578	Sart3	100	86.515	ENSEASG00005014500	SART3	100	86.618	Equus_asinus_asinus
MGP_SPRETEiJ_G0028578	Sart3	100	86.411	ENSECAG00000000314	SART3	100	86.515	Equus_caballus
MGP_SPRETEiJ_G0028578	Sart3	100	77.559	ENSEEUG00000002954	SART3	100	76.939	Erinaceus_europaeus
MGP_SPRETEiJ_G0028578	Sart3	90	62.363	ENSELUG00000013025	sart3	97	60.970	Esox_lucius
MGP_SPRETEiJ_G0028578	Sart3	98	87.250	ENSFCAG00000014041	SART3	100	87.033	Felis_catus
MGP_SPRETEiJ_G0028578	Sart3	89	73.295	ENSFALG00000008894	SART3	100	73.295	Ficedula_albicollis
MGP_SPRETEiJ_G0028578	Sart3	100	86.722	ENSFDAG00000014878	SART3	100	86.618	Fukomys_damarensis
MGP_SPRETEiJ_G0028578	Sart3	90	61.315	ENSFHEG00000015715	sart3	94	61.326	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028578	Sart3	86	64.674	ENSGMOG00000017859	sart3	98	60.067	Gadus_morhua
MGP_SPRETEiJ_G0028578	Sart3	94	73.260	ENSGALG00000039472	SART3	94	72.598	Gallus_gallus
MGP_SPRETEiJ_G0028578	Sart3	90	61.247	ENSGAFG00000018055	sart3	94	61.179	Gambusia_affinis
MGP_SPRETEiJ_G0028578	Sart3	91	60.898	ENSGACG00000008787	sart3	98	61.556	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028578	Sart3	90	74.859	ENSGAGG00000016519	SART3	95	74.523	Gopherus_agassizii
MGP_SPRETEiJ_G0028578	Sart3	100	86.929	ENSGGOG00000011562	SART3	100	86.929	Gorilla_gorilla
MGP_SPRETEiJ_G0028578	Sart3	90	63.304	ENSHBUG00000005247	sart3	96	61.818	Haplochromis_burtoni
MGP_SPRETEiJ_G0028578	Sart3	100	86.618	ENSHGLG00000011579	SART3	100	86.515	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028578	Sart3	100	84.025	ENSHGLG00100013263	SART3	100	83.921	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028578	Sart3	90	55.530	ENSHCOG00000009693	sart3	93	56.772	Hippocampus_comes
MGP_SPRETEiJ_G0028578	Sart3	90	62.348	ENSIPUG00000021151	sart3	94	62.279	Ictalurus_punctatus
MGP_SPRETEiJ_G0028578	Sart3	100	86.010	ENSSTOG00000002376	SART3	100	86.010	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028578	Sart3	99	87.161	ENSJJAG00000021869	Sart3	100	86.068	Jaculus_jaculus
MGP_SPRETEiJ_G0028578	Sart3	90	63.697	ENSKMAG00000016864	sart3	94	63.545	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028578	Sart3	90	61.814	ENSLBEG00000001263	sart3	94	61.761	Labrus_bergylta
MGP_SPRETEiJ_G0028578	Sart3	72	53.288	ENSLACG00000007414	SART3	94	53.005	Latimeria_chalumnae
MGP_SPRETEiJ_G0028578	Sart3	92	65.081	ENSLOCG00000004710	sart3	91	65.604	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028578	Sart3	98	87.107	ENSLAFG00000007167	SART3	100	86.536	Loxodonta_africana
MGP_SPRETEiJ_G0028578	Sart3	100	85.845	ENSMFAG00000039887	SART3	100	85.845	Macaca_fascicularis
MGP_SPRETEiJ_G0028578	Sart3	100	85.845	ENSMMUG00000017124	SART3	100	85.845	Macaca_mulatta
MGP_SPRETEiJ_G0028578	Sart3	100	85.845	ENSMNEG00000011093	SART3	100	85.845	Macaca_nemestrina
MGP_SPRETEiJ_G0028578	Sart3	100	85.947	ENSMLEG00000034251	SART3	100	85.947	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028578	Sart3	90	62.583	ENSMAMG00000016195	sart3	94	63.111	Mastacembelus_armatus
MGP_SPRETEiJ_G0028578	Sart3	90	63.263	ENSMZEG00005015248	sart3	96	61.777	Maylandia_zebra
MGP_SPRETEiJ_G0028578	Sart3	89	73.834	ENSMGAG00000005746	SART3	100	74.061	Meleagris_gallopavo
MGP_SPRETEiJ_G0028578	Sart3	100	92.827	ENSMAUG00000012434	Sart3	100	92.620	Mesocricetus_auratus
MGP_SPRETEiJ_G0028578	Sart3	100	85.566	ENSMICG00000013052	SART3	100	84.839	Microcebus_murinus
MGP_SPRETEiJ_G0028578	Sart3	100	93.763	ENSMOCG00000004078	Sart3	100	93.763	Microtus_ochrogaster
MGP_SPRETEiJ_G0028578	Sart3	90	63.605	ENSMMOG00000017629	sart3	94	63.420	Mola_mola
MGP_SPRETEiJ_G0028578	Sart3	90	76.464	ENSMODG00000002859	SART3	94	74.620	Monodelphis_domestica
MGP_SPRETEiJ_G0028578	Sart3	90	62.500	ENSMALG00000014549	sart3	89	62.388	Monopterus_albus
MGP_SPRETEiJ_G0028578	Sart3	100	99.376	MGP_CAROLIEiJ_G0027580	Sart3	100	99.376	Mus_caroli
MGP_SPRETEiJ_G0028578	Sart3	100	99.584	ENSMUSG00000018974	Sart3	100	99.584	Mus_musculus
MGP_SPRETEiJ_G0028578	Sart3	100	96.881	MGP_PahariEiJ_G0024162	Sart3	100	96.881	Mus_pahari
MGP_SPRETEiJ_G0028578	Sart3	98	86.934	ENSMPUG00000003402	SART3	91	86.722	Mustela_putorius_furo
MGP_SPRETEiJ_G0028578	Sart3	100	86.214	ENSMLUG00000007906	SART3	100	85.685	Myotis_lucifugus
MGP_SPRETEiJ_G0028578	Sart3	99	90.211	ENSNGAG00000014773	Sart3	100	89.720	Nannospalax_galili
MGP_SPRETEiJ_G0028578	Sart3	90	63.485	ENSNBRG00000008526	sart3	97	61.991	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028578	Sart3	100	85.947	ENSNLEG00000006767	SART3	100	85.947	Nomascus_leucogenys
MGP_SPRETEiJ_G0028578	Sart3	89	75.754	ENSMEUG00000006799	SART3	100	75.754	Notamacropus_eugenii
MGP_SPRETEiJ_G0028578	Sart3	100	83.091	ENSOPRG00000015817	SART3	100	83.091	Ochotona_princeps
MGP_SPRETEiJ_G0028578	Sart3	100	86.722	ENSODEG00000008547	SART3	100	86.618	Octodon_degus
MGP_SPRETEiJ_G0028578	Sart3	90	63.667	ENSONIG00000013413	sart3	96	62.379	Oreochromis_niloticus
MGP_SPRETEiJ_G0028578	Sart3	89	73.151	ENSOANG00000008794	SART3	100	73.151	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028578	Sart3	100	87.876	ENSOCUG00000016285	SART3	100	87.876	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028578	Sart3	90	63.140	ENSORLG00000006895	sart3	99	61.571	Oryzias_latipes
MGP_SPRETEiJ_G0028578	Sart3	90	63.252	ENSORLG00020015473	sart3	97	62.284	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028578	Sart3	90	62.892	ENSORLG00015003914	sart3	97	61.931	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028578	Sart3	90	63.575	ENSOMEG00000002174	sart3	94	63.464	Oryzias_melastigma
MGP_SPRETEiJ_G0028578	Sart3	100	85.744	ENSOGAG00000000932	SART3	100	85.021	Otolemur_garnettii
MGP_SPRETEiJ_G0028578	Sart3	98	83.753	ENSOARG00000018082	SART3	100	83.591	Ovis_aries
MGP_SPRETEiJ_G0028578	Sart3	100	85.234	ENSPPAG00000041812	SART3	100	85.234	Pan_paniscus
MGP_SPRETEiJ_G0028578	Sart3	98	87.144	ENSPPRG00000001579	SART3	100	86.929	Panthera_pardus
MGP_SPRETEiJ_G0028578	Sart3	98	87.250	ENSPTIG00000021928	SART3	100	87.033	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028578	Sart3	100	85.132	ENSPTRG00000005404	SART3	100	85.132	Pan_troglodytes
MGP_SPRETEiJ_G0028578	Sart3	100	85.947	ENSPANG00000024915	SART3	100	85.947	Papio_anubis
MGP_SPRETEiJ_G0028578	Sart3	96	61.052	ENSPKIG00000025203	sart3	94	62.971	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028578	Sart3	89	74.044	ENSPSIG00000002594	SART3	100	74.044	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028578	Sart3	94	60.086	ENSPMGG00000018729	sart3	94	60.831	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028578	Sart3	89	92.218	ENSPEMG00000020811	-	94	92.218	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028578	Sart3	90	77.401	ENSPCIG00000023889	SART3	99	72.386	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028578	Sart3	90	62.222	ENSPFOG00000010290	sart3	94	62.058	Poecilia_formosa
MGP_SPRETEiJ_G0028578	Sart3	90	62.222	ENSPLAG00000002711	sart3	94	62.000	Poecilia_latipinna
MGP_SPRETEiJ_G0028578	Sart3	90	61.598	ENSPMEG00000000456	sart3	94	61.878	Poecilia_mexicana
MGP_SPRETEiJ_G0028578	Sart3	90	62.084	ENSPREG00000022086	sart3	95	62.084	Poecilia_reticulata
MGP_SPRETEiJ_G0028578	Sart3	100	87.033	ENSPPYG00000004919	SART3	100	87.033	Pongo_abelii
MGP_SPRETEiJ_G0028578	Sart3	98	82.769	ENSPCAG00000007505	SART3	100	76.939	Procavia_capensis
MGP_SPRETEiJ_G0028578	Sart3	100	82.822	ENSPCOG00000014016	SART3	100	77.386	Propithecus_coquereli
MGP_SPRETEiJ_G0028578	Sart3	100	82.884	ENSPVAG00000007442	SART3	100	82.884	Pteropus_vampyrus
MGP_SPRETEiJ_G0028578	Sart3	90	63.304	ENSPNYG00000015653	sart3	96	61.818	Pundamilia_nyererei
MGP_SPRETEiJ_G0028578	Sart3	92	61.806	ENSPNAG00000001851	sart3	94	62.375	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028578	Sart3	100	93.361	ENSRNOG00000000702	Sart3	100	93.257	Rattus_norvegicus
MGP_SPRETEiJ_G0028578	Sart3	100	87.448	ENSRBIG00000034143	SART3	100	87.448	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028578	Sart3	100	87.344	ENSRROG00000003629	SART3	100	87.344	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028578	Sart3	100	84.336	ENSSBOG00000033093	SART3	100	84.336	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028578	Sart3	89	77.159	ENSSHAG00000010864	SART3	100	76.818	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028578	Sart3	96	63.235	ENSSFOG00015004012	sart3	91	65.957	Scleropages_formosus
MGP_SPRETEiJ_G0028578	Sart3	90	61.521	ENSSMAG00000014666	sart3	98	60.323	Scophthalmus_maximus
MGP_SPRETEiJ_G0028578	Sart3	90	62.293	ENSSDUG00000011664	sart3	94	60.750	Seriola_dumerili
MGP_SPRETEiJ_G0028578	Sart3	90	62.291	ENSSLDG00000024990	sart3	88	62.749	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028578	Sart3	84	86.854	ENSSARG00000005401	SART3	83	87.241	Sorex_araneus
MGP_SPRETEiJ_G0028578	Sart3	87	73.481	ENSSPUG00000009541	SART3	93	73.023	Sphenodon_punctatus
MGP_SPRETEiJ_G0028578	Sart3	90	63.170	ENSSPAG00000010658	sart3	94	62.835	Stegastes_partitus
MGP_SPRETEiJ_G0028578	Sart3	98	86.667	ENSSSCG00000009946	SART3	99	85.566	Sus_scrofa
MGP_SPRETEiJ_G0028578	Sart3	90	73.869	ENSTGUG00000006905	SART3	99	73.761	Taeniopygia_guttata
MGP_SPRETEiJ_G0028578	Sart3	90	61.478	ENSTRUG00000014173	sart3	94	61.030	Takifugu_rubripes
MGP_SPRETEiJ_G0028578	Sart3	90	61.752	ENSTNIG00000015867	sart3	99	61.830	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028578	Sart3	95	82.114	ENSTBEG00000008888	SART3	99	82.988	Tupaia_belangeri
MGP_SPRETEiJ_G0028578	Sart3	98	84.122	ENSTTRG00000003993	SART3	100	84.369	Tursiops_truncatus
MGP_SPRETEiJ_G0028578	Sart3	98	86.828	ENSUAMG00000023906	SART3	100	86.618	Ursus_americanus
MGP_SPRETEiJ_G0028578	Sart3	93	88.453	ENSUMAG00000005844	SART3	98	88.404	Ursus_maritimus
MGP_SPRETEiJ_G0028578	Sart3	59	86.290	ENSVPAG00000009997	-	65	86.290	Vicugna_pacos
MGP_SPRETEiJ_G0028578	Sart3	98	87.131	ENSVVUG00000008216	SART3	100	86.826	Vulpes_vulpes
MGP_SPRETEiJ_G0028578	Sart3	90	65.848	ENSXETG00000017645	sart3	96	65.556	Xenopus_tropicalis
MGP_SPRETEiJ_G0028578	Sart3	90	63.051	ENSXCOG00000017212	sart3	94	63.122	Xiphophorus_couchianus
MGP_SPRETEiJ_G0028578	Sart3	90	62.111	ENSXMAG00000018160	sart3	94	62.069	Xiphophorus_maculatus