EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028616 (Gene tree)
Gene ID: -
Gene Symbol: Pop5
Alias: 1500019J17Rik|2700077E03Rik|Rnasep3
Full Name: processing of precursor 5%2C ribonuclease P/MRP family (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 10417 bases
Position: chr5:114053223-114063639
Accession: 2151221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0072794	RNase_P_Rpp14	PF01900.19	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0072798	-	529	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072799	-	428	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072794	-	1027	-	MGP_SPRETEiJ_P0072794	169 (aa)	-	-
MGP_SPRETEiJ_T0072795	-	379	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072796	-	1587	-	MGP_SPRETEiJ_P0072796	169 (aa)	-	-
MGP_SPRETEiJ_T0072797	-	575	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSG00000167272	POP5	100	85.799	Homo_sapiens
MGP_SPRETEiJ_G0028616	Pop5	84	52.817	ENSAPOG00000023686	POP5	99	49.398	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028616	Pop5	100	82.558	ENSAMEG00000008503	POP5	100	82.558	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSACIG00000018362	pop5	99	51.515	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028616	Pop5	84	52.817	ENSAOCG00000001930	pop5	99	50.303	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028616	Pop5	84	52.817	ENSAPEG00000006795	pop5	99	50.303	Amphiprion_percula
MGP_SPRETEiJ_G0028616	Pop5	91	52.597	ENSATEG00000016792	pop5	99	50.602	Anabas_testudineus
MGP_SPRETEiJ_G0028616	Pop5	53	74.157	ENSAPLG00000015761	POP5	100	67.257	Anas_platyrhynchos
MGP_SPRETEiJ_G0028616	Pop5	96	55.556	ENSACAG00000003091	POP5	97	55.556	Anolis_carolinensis
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSANAG00000023744	POP5	100	84.615	Aotus_nancymaae
MGP_SPRETEiJ_G0028616	Pop5	89	52.980	ENSACLG00000021131	-	99	52.410	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028616	Pop5	89	52.980	ENSAMXG00000038175	pop5	94	49.693	Astyanax_mexicanus
MGP_SPRETEiJ_G0028616	Pop5	100	84.118	ENSBTAG00000005385	POP5	100	84.118	Bos_taurus
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSCJAG00000001309	POP5	100	84.615	Callithrix_jacchus
MGP_SPRETEiJ_G0028616	Pop5	100	84.706	ENSCAFG00000010389	POP5	100	84.706	Canis_familiaris
MGP_SPRETEiJ_G0028616	Pop5	100	84.706	ENSCAFG00020020663	POP5	100	84.706	Canis_lupus_dingo
MGP_SPRETEiJ_G0028616	Pop5	100	85.294	ENSCHIG00000016402	POP5	100	85.294	Capra_hircus
MGP_SPRETEiJ_G0028616	Pop5	100	86.982	ENSTSYG00000027616	POP5	100	86.982	Carlito_syrichta
MGP_SPRETEiJ_G0028616	Pop5	67	85.088	ENSCAPG00000016873	POP5	100	85.088	Cavia_aperea
MGP_SPRETEiJ_G0028616	Pop5	100	84.615	ENSCPOG00000012337	POP5	100	84.615	Cavia_porcellus
MGP_SPRETEiJ_G0028616	Pop5	88	90.541	ENSCCAG00000023154	POP5	100	83.432	Cebus_capucinus
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSCATG00000036825	POP5	100	85.207	Cercocebus_atys
MGP_SPRETEiJ_G0028616	Pop5	100	87.574	ENSCLAG00000007808	POP5	100	87.574	Chinchilla_lanigera
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSCSAG00000002246	POP5	100	85.207	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028616	Pop5	86	73.103	ENSCHOG00000013969	POP5	100	70.000	Choloepus_hoffmanni
MGP_SPRETEiJ_G0028616	Pop5	96	66.871	ENSCPBG00000011331	POP5	96	66.871	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSCANG00000028001	POP5	100	84.615	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028616	Pop5	100	92.899	ENSCGRG00001017974	Pop5	100	92.899	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028616	Pop5	100	92.899	ENSCGRG00000010102	Pop5	100	92.899	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028616	Pop5	91	52.597	ENSCSEG00000008332	-	99	51.497	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028616	Pop5	81	56.204	ENSCSEG00000011103	pop5	91	56.204	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028616	Pop5	90	38.562	ENSCVAG00000009152	-	90	37.908	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028616	Pop5	88	54.605	ENSDARG00000053452	pop5	98	52.976	Danio_rerio
MGP_SPRETEiJ_G0028616	Pop5	100	84.118	ENSDNOG00000045952	-	100	85.294	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028616	Pop5	100	83.140	ENSDNOG00000012668	-	90	84.302	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028616	Pop5	100	86.391	ENSDORG00000029401	Pop5	100	86.391	Dipodomys_ordii
MGP_SPRETEiJ_G0028616	Pop5	99	82.036	ENSETEG00000009283	POP5	99	82.036	Echinops_telfairi
MGP_SPRETEiJ_G0028616	Pop5	87	40.136	ENSEBUG00000016369	pop5	90	40.136	Eptatretus_burgeri
MGP_SPRETEiJ_G0028616	Pop5	100	83.529	ENSEASG00005004714	POP5	100	84.706	Equus_asinus_asinus
MGP_SPRETEiJ_G0028616	Pop5	100	83.529	ENSECAG00000010012	POP5	100	84.706	Equus_caballus
MGP_SPRETEiJ_G0028616	Pop5	96	52.761	ENSELUG00000023394	pop5	100	52.761	Esox_lucius
MGP_SPRETEiJ_G0028616	Pop5	100	84.118	ENSFCAG00000042614	POP5	100	84.118	Felis_catus
MGP_SPRETEiJ_G0028616	Pop5	89	68.212	ENSFALG00000007537	POP5	95	65.644	Ficedula_albicollis
MGP_SPRETEiJ_G0028616	Pop5	96	86.420	ENSFDAG00000009972	POP5	96	86.420	Fukomys_damarensis
MGP_SPRETEiJ_G0028616	Pop5	96	53.374	ENSFHEG00000022341	pop5	98	53.374	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028616	Pop5	76	55.039	ENSGMOG00000001073	pop5	98	55.039	Gadus_morhua
MGP_SPRETEiJ_G0028616	Pop5	88	60.135	ENSGALG00000007124	POP5	57	57.317	Gallus_gallus
MGP_SPRETEiJ_G0028616	Pop5	84	57.042	ENSGAFG00000005937	-	97	53.988	Gambusia_affinis
MGP_SPRETEiJ_G0028616	Pop5	87	55.102	ENSGACG00000012710	-	90	55.102	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028616	Pop5	96	66.871	ENSGAGG00000016005	POP5	96	66.871	Gopherus_agassizii
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSGGOG00000013505	POP5	100	85.799	Gorilla_gorilla
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSHBUG00000011718	-	99	52.381	Haplochromis_burtoni
MGP_SPRETEiJ_G0028616	Pop5	100	84.024	ENSHGLG00000011786	POP5	100	84.024	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028616	Pop5	100	84.024	ENSHGLG00100014284	POP5	100	84.024	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028616	Pop5	84	52.817	ENSHCOG00000011809	pop5	99	49.080	Hippocampus_comes
MGP_SPRETEiJ_G0028616	Pop5	89	50.000	ENSIPUG00000003437	pop5	100	48.214	Ictalurus_punctatus
MGP_SPRETEiJ_G0028616	Pop5	100	88.166	ENSSTOG00000012577	POP5	100	88.166	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028616	Pop5	100	83.041	ENSJJAG00000001080	Pop5	100	85.380	Jaculus_jaculus
MGP_SPRETEiJ_G0028616	Pop5	87	51.020	ENSKMAG00000011158	-	99	49.112	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028616	Pop5	91	50.649	ENSLBEG00000008652	pop5	91	49.102	Labrus_bergylta
MGP_SPRETEiJ_G0028616	Pop5	84	64.789	ENSLACG00000018188	POP5	88	64.789	Latimeria_chalumnae
MGP_SPRETEiJ_G0028616	Pop5	84	53.521	ENSLOCG00000002924	pop5	98	50.303	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028616	Pop5	100	85.380	ENSLAFG00000014545	POP5	100	85.380	Loxodonta_africana
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSMFAG00000045933	POP5	100	87.898	Macaca_fascicularis
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSMMUG00000040120	POP5	100	85.799	Macaca_mulatta
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSMNEG00000041716	POP5	100	85.799	Macaca_nemestrina
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSMLEG00000029377	POP5	100	85.207	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028616	Pop5	89	54.000	ENSMAMG00000002108	pop5	99	50.602	Mastacembelus_armatus
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSMZEG00005000069	-	99	52.381	Maylandia_zebra
MGP_SPRETEiJ_G0028616	Pop5	100	92.899	ENSMAUG00000019670	Pop5	100	92.899	Mesocricetus_auratus
MGP_SPRETEiJ_G0028616	Pop5	100	88.235	ENSMICG00000008692	POP5	100	90.000	Microcebus_murinus
MGP_SPRETEiJ_G0028616	Pop5	100	84.024	ENSMOCG00000013322	Pop5	100	84.024	Microtus_ochrogaster
MGP_SPRETEiJ_G0028616	Pop5	80	54.815	ENSMMOG00000010471	pop5	82	54.815	Mola_mola
MGP_SPRETEiJ_G0028616	Pop5	100	76.331	ENSMODG00000003066	POP5	68	76.331	Monodelphis_domestica
MGP_SPRETEiJ_G0028616	Pop5	84	54.930	ENSMALG00000017797	-	99	50.602	Monopterus_albus
MGP_SPRETEiJ_G0028616	Pop5	100	98.817	MGP_CAROLIEiJ_G0027618	Pop5	100	98.817	Mus_caroli
MGP_SPRETEiJ_G0028616	Pop5	100	98.817	ENSMUSG00000060152	Pop5	100	98.817	Mus_musculus
MGP_SPRETEiJ_G0028616	Pop5	100	95.858	MGP_PahariEiJ_G0024198	Pop5	100	95.858	Mus_pahari
MGP_SPRETEiJ_G0028616	Pop5	88	87.248	ENSMPUG00000003221	POP5	100	82.840	Mustela_putorius_furo
MGP_SPRETEiJ_G0028616	Pop5	86	88.514	ENSMLUG00000014657	POP5	99	85.714	Myotis_lucifugus
MGP_SPRETEiJ_G0028616	Pop5	100	88.824	ENSNGAG00000002594	Pop5	99	90.533	Nannospalax_galili
MGP_SPRETEiJ_G0028616	Pop5	66	53.571	ENSNBRG00000001020	-	83	53.571	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSNLEG00000015839	POP5	100	85.799	Nomascus_leucogenys
MGP_SPRETEiJ_G0028616	Pop5	100	75.148	ENSMEUG00000015288	POP5	100	75.148	Notamacropus_eugenii
MGP_SPRETEiJ_G0028616	Pop5	86	90.411	ENSOPRG00000004327	POP5	99	85.882	Ochotona_princeps
MGP_SPRETEiJ_G0028616	Pop5	99	73.810	ENSODEG00000010351	-	100	73.810	Octodon_degus
MGP_SPRETEiJ_G0028616	Pop5	100	85.207	ENSODEG00000006549	-	100	85.207	Octodon_degus
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSONIG00000011172	pop5	99	52.976	Oreochromis_niloticus
MGP_SPRETEiJ_G0028616	Pop5	68	70.435	ENSOANG00000001792	-	100	72.174	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028616	Pop5	99	84.615	ENSOCUG00000006537	POP5	99	84.615	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028616	Pop5	89	51.333	ENSORLG00000014745	pop5	90	51.333	Oryzias_latipes
MGP_SPRETEiJ_G0028616	Pop5	84	52.817	ENSORLG00020001168	pop5	85	52.817	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028616	Pop5	80	55.147	ENSORLG00015013535	pop5	80	55.147	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028616	Pop5	96	50.000	ENSOMEG00000017643	pop5	99	50.000	Oryzias_melastigma
MGP_SPRETEiJ_G0028616	Pop5	88	88.591	ENSOGAG00000008528	POP5	91	88.591	Otolemur_garnettii
MGP_SPRETEiJ_G0028616	Pop5	100	84.302	ENSOARG00000012764	POP5	100	84.302	Ovis_aries
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSPPAG00000043719	POP5	100	85.799	Pan_paniscus
MGP_SPRETEiJ_G0028616	Pop5	100	84.118	ENSPPRG00000006474	POP5	100	84.118	Panthera_pardus
MGP_SPRETEiJ_G0028616	Pop5	100	84.118	ENSPTIG00000012194	POP5	100	84.118	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSPTRG00000005543	POP5	100	85.799	Pan_troglodytes
MGP_SPRETEiJ_G0028616	Pop5	88	91.892	ENSPANG00000014166	POP5	100	85.799	Papio_anubis
MGP_SPRETEiJ_G0028616	Pop5	88	57.333	ENSPKIG00000025154	pop5	95	56.604	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028616	Pop5	65	70.909	ENSPSIG00000013154	POP5	86	70.909	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028616	Pop5	98	49.398	ENSPMGG00000000812	-	100	49.398	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028616	Pop5	100	92.899	ENSPEMG00000017493	Pop5	100	92.899	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028616	Pop5	88	54.054	ENSPFOG00000013000	pop5	94	55.446	Poecilia_formosa
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSPLAG00000014070	pop5	85	54.225	Poecilia_latipinna
MGP_SPRETEiJ_G0028616	Pop5	87	54.422	ENSPMEG00000024039	pop5	97	52.147	Poecilia_mexicana
MGP_SPRETEiJ_G0028616	Pop5	87	54.422	ENSPMEG00000012863	POP5	97	52.147	Poecilia_mexicana
MGP_SPRETEiJ_G0028616	Pop5	84	55.634	ENSPREG00000020151	pop5	85	55.634	Poecilia_reticulata
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSPPYG00000005036	POP5	84	85.207	Pongo_abelii
MGP_SPRETEiJ_G0028616	Pop5	62	88.462	ENSPCAG00000004788	POP5	100	88.462	Procavia_capensis
MGP_SPRETEiJ_G0028616	Pop5	100	87.059	ENSPCOG00000017618	POP5	100	88.235	Propithecus_coquereli
MGP_SPRETEiJ_G0028616	Pop5	100	85.882	ENSPVAG00000002233	POP5	100	87.059	Pteropus_vampyrus
MGP_SPRETEiJ_G0028616	Pop5	84	54.225	ENSPNYG00000002679	pop5	99	52.381	Pundamilia_nyererei
MGP_SPRETEiJ_G0028616	Pop5	84	50.350	ENSPNAG00000012662	pop5	97	45.665	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028616	Pop5	94	94.969	ENSRNOG00000001199	Pop5	100	94.675	Rattus_norvegicus
MGP_SPRETEiJ_G0028616	Pop5	86	90.411	ENSRBIG00000043505	POP5	96	89.404	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028616	Pop5	88	90.541	ENSRROG00000045063	POP5	96	89.404	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028616	Pop5	88	91.216	ENSSBOG00000032691	POP5	100	89.706	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028616	Pop5	84	56.643	ENSSFOG00015005630	pop5	100	54.118	Scleropages_formosus
MGP_SPRETEiJ_G0028616	Pop5	84	52.778	ENSSMAG00000018868	pop5	85	52.778	Scophthalmus_maximus
MGP_SPRETEiJ_G0028616	Pop5	99	52.096	ENSSDUG00000001282	-	99	52.096	Seriola_dumerili
MGP_SPRETEiJ_G0028616	Pop5	99	51.497	ENSSLDG00000017031	pop5	99	51.497	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028616	Pop5	99	51.497	ENSSLDG00000003801	-	99	51.497	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028616	Pop5	62	88.462	ENSSARG00000005564	POP5	64	88.462	Sorex_araneus
MGP_SPRETEiJ_G0028616	Pop5	84	72.535	ENSSPUG00000015531	POP5	98	65.854	Sphenodon_punctatus
MGP_SPRETEiJ_G0028616	Pop5	84	57.042	ENSSPAG00000015306	pop5	99	53.614	Stegastes_partitus
MGP_SPRETEiJ_G0028616	Pop5	100	87.059	ENSSSCG00000009912	POP5	100	87.059	Sus_scrofa
MGP_SPRETEiJ_G0028616	Pop5	100	64.497	ENSTGUG00000009602	POP5	100	64.497	Taeniopygia_guttata
MGP_SPRETEiJ_G0028616	Pop5	99	50.299	ENSTRUG00000016214	pop5	99	50.909	Takifugu_rubripes
MGP_SPRETEiJ_G0028616	Pop5	99	53.571	ENSTNIG00000011465	pop5	96	55.556	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028616	Pop5	100	83.432	ENSTBEG00000010131	POP5	100	83.432	Tupaia_belangeri
MGP_SPRETEiJ_G0028616	Pop5	100	86.471	ENSTTRG00000000153	POP5	100	86.471	Tursiops_truncatus
MGP_SPRETEiJ_G0028616	Pop5	96	82.317	ENSUAMG00000015541	POP5	76	82.317	Ursus_americanus
MGP_SPRETEiJ_G0028616	Pop5	100	82.941	ENSUMAG00000006137	POP5	100	82.941	Ursus_maritimus
MGP_SPRETEiJ_G0028616	Pop5	100	85.294	ENSVPAG00000010365	POP5	100	85.294	Vicugna_pacos
MGP_SPRETEiJ_G0028616	Pop5	100	84.706	ENSVVUG00000021154	POP5	100	84.706	Vulpes_vulpes
MGP_SPRETEiJ_G0028616	Pop5	67	64.602	ENSXETG00000031793	POP5	98	64.602	Xenopus_tropicalis
MGP_SPRETEiJ_G0028616	Pop5	84	57.042	ENSXMAG00000003508	-	84	53.988	Xiphophorus_maculatus