EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028637 (Gene tree)
Gene ID: -
Gene Symbol: Srrm4
Alias: 1500001A10Rik|B230202K19Rik|bv|flopsy|fp|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 190493 bases
Position: chr5:115355460-115545952
Accession: 1916205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0072918	SRRM_C	PF15230.6	2.3e-24	1	1
MGP_SPRETEiJ_P0072919	SRRM_C	PF15230.6	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0072918	-	7515	-	MGP_SPRETEiJ_P0072918	610 (aa)	-	-
MGP_SPRETEiJ_T0072919	-	2824	-	MGP_SPRETEiJ_P0072919	122 (aa)	-	-
MGP_SPRETEiJ_T0072917	-	6606	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0072920	-	744	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028637	Srrm4	85	86.015	ENSG00000139767	SRRM4	85	86.731	Homo_sapiens
MGP_SPRETEiJ_G0028637	Srrm4	79	80.083	ENSAMEG00000016072	SRRM4	89	82.680	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028637	Srrm4	65	51.300	ENSAPLG00000009202	SRRM4	91	53.959	Anas_platyrhynchos
MGP_SPRETEiJ_G0028637	Srrm4	84	47.388	ENSACAG00000004139	SRRM4	88	50.933	Anolis_carolinensis
MGP_SPRETEiJ_G0028637	Srrm4	85	80.843	ENSBTAG00000008676	SRRM4	86	82.692	Bos_taurus
MGP_SPRETEiJ_G0028637	Srrm4	85	86.207	ENSCJAG00000009146	SRRM4	85	86.923	Callithrix_jacchus
MGP_SPRETEiJ_G0028637	Srrm4	85	82.885	ENSCAFG00000023113	SRRM4	85	85.000	Canis_familiaris
MGP_SPRETEiJ_G0028637	Srrm4	51	84.494	ENSCAFG00020018665	SRRM4	55	83.861	Canis_lupus_dingo
MGP_SPRETEiJ_G0028637	Srrm4	85	67.048	ENSCHIG00000019151	SRRM4	85	65.966	Capra_hircus
MGP_SPRETEiJ_G0028637	Srrm4	78	84.134	ENSTSYG00000012239	SRRM4	84	84.906	Carlito_syrichta
MGP_SPRETEiJ_G0028637	Srrm4	76	84.267	ENSCAPG00000008729	SRRM4	88	85.161	Cavia_aperea
MGP_SPRETEiJ_G0028637	Srrm4	85	85.221	ENSCPOG00000003544	SRRM4	85	85.934	Cavia_porcellus
MGP_SPRETEiJ_G0028637	Srrm4	85	85.441	ENSCCAG00000022479	SRRM4	85	86.154	Cebus_capucinus
MGP_SPRETEiJ_G0028637	Srrm4	85	85.249	ENSCATG00000036343	SRRM4	85	85.962	Cercocebus_atys
MGP_SPRETEiJ_G0028637	Srrm4	85	86.346	ENSCLAG00000009764	SRRM4	85	87.091	Chinchilla_lanigera
MGP_SPRETEiJ_G0028637	Srrm4	85	85.632	ENSCSAG00000002300	SRRM4	85	86.346	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028637	Srrm4	52	59.531	ENSCPBG00000012293	SRRM4	87	61.835	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028637	Srrm4	85	82.692	ENSCANG00000031719	SRRM4	85	83.205	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028637	Srrm4	85	90.698	ENSCGRG00001000544	Srrm4	86	93.411	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028637	Srrm4	85	85.907	ENSCGRG00000006973	Srrm4	85	85.853	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028637	Srrm4	85	82.659	ENSDNOG00000000260	SRRM4	88	83.430	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028637	Srrm4	85	76.775	ENSDORG00000015243	Srrm4	87	76.448	Dipodomys_ordii
MGP_SPRETEiJ_G0028637	Srrm4	84	82.205	ENSEASG00005008759	SRRM4	87	83.654	Equus_asinus_asinus
MGP_SPRETEiJ_G0028637	Srrm4	84	82.205	ENSECAG00000021729	SRRM4	87	83.654	Equus_caballus
MGP_SPRETEiJ_G0028637	Srrm4	84	85.687	ENSFCAG00000010536	SRRM4	83	86.538	Felis_catus
MGP_SPRETEiJ_G0028637	Srrm4	84	83.366	ENSFDAG00000007218	SRRM4	85	83.654	Fukomys_damarensis
MGP_SPRETEiJ_G0028637	Srrm4	85	86.207	ENSGGOG00000005338	SRRM4	85	86.923	Gorilla_gorilla
MGP_SPRETEiJ_G0028637	Srrm4	84	83.205	ENSHGLG00000007830	SRRM4	86	85.192	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028637	Srrm4	50	80.255	ENSHGLG00100008549	SRRM4	90	73.663	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028637	Srrm4	78	75.420	ENSSTOG00000026642	SRRM4	83	76.000	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028637	Srrm4	82	77.092	ENSJJAG00000016448	Srrm4	81	82.180	Jaculus_jaculus
MGP_SPRETEiJ_G0028637	Srrm4	84	85.078	ENSLAFG00000003731	SRRM4	84	84.170	Loxodonta_africana
MGP_SPRETEiJ_G0028637	Srrm4	85	85.824	ENSMFAG00000041271	SRRM4	84	86.538	Macaca_fascicularis
MGP_SPRETEiJ_G0028637	Srrm4	83	72.973	ENSMMUG00000021230	SRRM4	83	72.587	Macaca_mulatta
MGP_SPRETEiJ_G0028637	Srrm4	85	85.632	ENSMNEG00000044154	SRRM4	84	86.346	Macaca_nemestrina
MGP_SPRETEiJ_G0028637	Srrm4	85	86.015	ENSMLEG00000034455	SRRM4	85	86.731	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028637	Srrm4	84	59.023	ENSMGAG00000009082	SRRM4	87	60.561	Meleagris_gallopavo
MGP_SPRETEiJ_G0028637	Srrm4	85	90.310	ENSMAUG00000013203	Srrm4	86	93.023	Mesocricetus_auratus
MGP_SPRETEiJ_G0028637	Srrm4	85	85.057	ENSMICG00000012386	SRRM4	85	85.769	Microcebus_murinus
MGP_SPRETEiJ_G0028637	Srrm4	85	89.147	ENSMOCG00000006737	Srrm4	86	91.667	Microtus_ochrogaster
MGP_SPRETEiJ_G0028637	Srrm4	84	56.738	ENSMODG00000015283	SRRM4	86	54.352	Monodelphis_domestica
MGP_SPRETEiJ_G0028637	Srrm4	100	99.016	MGP_CAROLIEiJ_G0027638	Srrm4	100	99.016	Mus_caroli
MGP_SPRETEiJ_G0028637	Srrm4	100	98.689	ENSMUSG00000063919	Srrm4	100	98.689	Mus_musculus
MGP_SPRETEiJ_G0028637	Srrm4	100	96.066	MGP_PahariEiJ_G0024219	Srrm4	100	96.066	Mus_pahari
MGP_SPRETEiJ_G0028637	Srrm4	84	82.785	ENSMPUG00000002930	SRRM4	86	85.000	Mustela_putorius_furo
MGP_SPRETEiJ_G0028637	Srrm4	85	86.424	ENSNGAG00000020807	Srrm4	86	87.908	Nannospalax_galili
MGP_SPRETEiJ_G0028637	Srrm4	85	86.015	ENSNLEG00000000200	SRRM4	85	86.731	Nomascus_leucogenys
MGP_SPRETEiJ_G0028637	Srrm4	84	76.952	ENSOPRG00000016981	SRRM4	77	75.947	Ochotona_princeps
MGP_SPRETEiJ_G0028637	Srrm4	85	85.164	ENSODEG00000006291	SRRM4	85	85.934	Octodon_degus
MGP_SPRETEiJ_G0028637	Srrm4	84	84.749	ENSOCUG00000004503	SRRM4	77	83.109	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028637	Srrm4	85	84.674	ENSOGAG00000015431	SRRM4	85	85.385	Otolemur_garnettii
MGP_SPRETEiJ_G0028637	Srrm4	85	82.950	ENSOARG00000002063	SRRM4	86	83.846	Ovis_aries
MGP_SPRETEiJ_G0028637	Srrm4	78	85.565	ENSPPAG00000028134	SRRM4	84	86.345	Pan_paniscus
MGP_SPRETEiJ_G0028637	Srrm4	84	85.300	ENSPPRG00000002659	SRRM4	84	86.154	Panthera_pardus
MGP_SPRETEiJ_G0028637	Srrm4	57	66.859	ENSPTIG00000011414	SRRM4	62	75.235	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028637	Srrm4	85	86.207	ENSPTRG00000005517	SRRM4	85	86.923	Pan_troglodytes
MGP_SPRETEiJ_G0028637	Srrm4	85	85.632	ENSPANG00000022544	SRRM4	99	85.686	Papio_anubis
MGP_SPRETEiJ_G0028637	Srrm4	85	91.683	ENSPEMG00000001823	Srrm4	86	94.197	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028637	Srrm4	78	77.311	ENSPCAG00000016401	SRRM4	68	76.160	Procavia_capensis
MGP_SPRETEiJ_G0028637	Srrm4	85	85.632	ENSPCOG00000013803	SRRM4	86	86.346	Propithecus_coquereli
MGP_SPRETEiJ_G0028637	Srrm4	78	84.310	ENSPVAG00000017487	SRRM4	85	85.294	Pteropus_vampyrus
MGP_SPRETEiJ_G0028637	Srrm4	100	95.902	ENSRNOG00000001141	Srrm4	100	95.902	Rattus_norvegicus
MGP_SPRETEiJ_G0028637	Srrm4	55	84.911	ENSRBIG00000040107	SRRM4	80	74.526	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028637	Srrm4	55	85.503	ENSRROG00000035868	SRRM4	80	74.737	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028637	Srrm4	85	78.544	ENSSBOG00000035310	SRRM4	85	78.846	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028637	Srrm4	77	65.731	ENSSHAG00000017330	SRRM4	87	61.647	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028637	Srrm4	62	77.918	ENSSARG00000012647	SRRM4	84	65.756	Sorex_araneus
MGP_SPRETEiJ_G0028637	Srrm4	85	84.291	ENSSSCG00000009845	SRRM4	85	85.000	Sus_scrofa
MGP_SPRETEiJ_G0028637	Srrm4	63	54.962	ENSTGUG00000009228	SRRM4	91	55.514	Taeniopygia_guttata
MGP_SPRETEiJ_G0028637	Srrm4	67	86.897	ENSVPAG00000007937	SRRM4	71	85.496	Vicugna_pacos
MGP_SPRETEiJ_G0028637	Srrm4	62	47.507	ENSXETG00000019934	SRRM4	97	50.943	Xenopus_tropicalis