EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028656 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 94881 bases
Position: chr5:119383421-119478301
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073009	RRM_1	PF00076.22	1.8e-85	1	5
MGP_SPRETEiJ_P0073009	RRM_1	PF00076.22	1.8e-85	2	5
MGP_SPRETEiJ_P0073009	RRM_1	PF00076.22	1.8e-85	3	5
MGP_SPRETEiJ_P0073009	RRM_1	PF00076.22	1.8e-85	4	5
MGP_SPRETEiJ_P0073009	RRM_1	PF00076.22	1.8e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073010	-	455	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073011	-	600	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073012	-	1383	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073013	-	632	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073014	-	485	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073015	-	1920	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073016	-	391	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073017	-	360	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073009	-	4000	-	MGP_SPRETEiJ_P0073009	953 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028656	Rbm19	62	34.667	MGP_SPRETEiJ_G0020636	Pabpc1	58	34.667
MGP_SPRETEiJ_G0028656	Rbm19	70	34.667	MGP_SPRETEiJ_G0023126	Pabpc2	59	34.667
MGP_SPRETEiJ_G0028656	Rbm19	68	32.632	MGP_SPRETEiJ_G0027415	Pabpc4	62	34.940
MGP_SPRETEiJ_G0028656	Rbm19	72	36.066	MGP_SPRETEiJ_G0025549	Pabpc1l	60	35.484
MGP_SPRETEiJ_G0028656	Rbm19	72	34.667	MGP_SPRETEiJ_G0021962	Pabpc6	57	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028656	Rbm19	100	80.682	ENSG00000122965	RBM19	98	85.185	Homo_sapiens
MGP_SPRETEiJ_G0028656	Rbm19	99	58.455	ENSAPOG00000010507	rbm19	99	58.787	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028656	Rbm19	100	76.392	ENSAMEG00000008544	RBM19	100	76.804	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028656	Rbm19	97	59.638	ENSACIG00000017780	rbm19	99	59.405	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028656	Rbm19	99	59.275	ENSAOCG00000008554	rbm19	99	58.982	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028656	Rbm19	97	58.599	ENSAPEG00000022381	rbm19	96	58.493	Amphiprion_percula
MGP_SPRETEiJ_G0028656	Rbm19	98	59.158	ENSATEG00000007000	rbm19	99	58.544	Anabas_testudineus
MGP_SPRETEiJ_G0028656	Rbm19	92	62.222	ENSAPLG00000015319	RBM19	99	62.762	Anas_platyrhynchos
MGP_SPRETEiJ_G0028656	Rbm19	99	65.577	ENSACAG00000005065	RBM19	99	65.577	Anolis_carolinensis
MGP_SPRETEiJ_G0028656	Rbm19	100	79.731	ENSANAG00000024136	RBM19	100	79.938	Aotus_nancymaae
MGP_SPRETEiJ_G0028656	Rbm19	99	56.712	ENSACLG00000001399	rbm19	99	56.133	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028656	Rbm19	88	61.774	ENSAMXG00000017073	rbm19	97	61.129	Astyanax_mexicanus
MGP_SPRETEiJ_G0028656	Rbm19	100	79.278	ENSBTAG00000031824	RBM19	100	79.257	Bos_taurus
MGP_SPRETEiJ_G0028656	Rbm19	83	42.963	WBGene00004315	rbd-1	99	43.299	Caenorhabditis_elegans
MGP_SPRETEiJ_G0028656	Rbm19	100	79.628	ENSCJAG00000009798	RBM19	100	79.938	Callithrix_jacchus
MGP_SPRETEiJ_G0028656	Rbm19	100	78.189	ENSCAFG00000009146	RBM19	99	78.498	Canis_familiaris
MGP_SPRETEiJ_G0028656	Rbm19	100	78.292	ENSCAFG00020017862	RBM19	99	78.601	Canis_lupus_dingo
MGP_SPRETEiJ_G0028656	Rbm19	100	79.197	ENSCHIG00000014917	RBM19	100	80.228	Capra_hircus
MGP_SPRETEiJ_G0028656	Rbm19	89	78.721	ENSTSYG00000007207	RBM19	96	79.234	Carlito_syrichta
MGP_SPRETEiJ_G0028656	Rbm19	99	79.285	ENSCAPG00000006869	RBM19	99	79.706	Cavia_aperea
MGP_SPRETEiJ_G0028656	Rbm19	100	79.876	ENSCPOG00000026629	RBM19	100	80.544	Cavia_porcellus
MGP_SPRETEiJ_G0028656	Rbm19	84	71.936	ENSCCAG00000026637	-	99	71.569	Cebus_capucinus
MGP_SPRETEiJ_G0028656	Rbm19	100	79.835	ENSCCAG00000021665	-	100	80.041	Cebus_capucinus
MGP_SPRETEiJ_G0028656	Rbm19	99	80.314	ENSCATG00000035841	RBM19	100	80.209	Cercocebus_atys
MGP_SPRETEiJ_G0028656	Rbm19	100	79.734	ENSCLAG00000009965	RBM19	100	80.473	Chinchilla_lanigera
MGP_SPRETEiJ_G0028656	Rbm19	100	75.992	ENSCSAG00000002352	RBM19	96	77.327	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028656	Rbm19	99	67.043	ENSCPBG00000011990	RBM19	99	67.382	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028656	Rbm19	80	50.313	ENSCING00000023076	-	95	49.085	Ciona_intestinalis
MGP_SPRETEiJ_G0028656	Rbm19	100	80.145	ENSCANG00000035927	RBM19	100	80.455	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028656	Rbm19	100	89.864	ENSCGRG00001000323	Rbm19	100	90.073	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028656	Rbm19	100	89.864	ENSCGRG00000010371	Rbm19	100	90.073	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028656	Rbm19	99	58.696	ENSCSEG00000017436	rbm19	94	63.459	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028656	Rbm19	99	56.846	ENSCVAG00000000300	rbm19	100	57.760	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.594	ENSDARG00000042590	rbm19	100	57.523	Danio_rerio
MGP_SPRETEiJ_G0028656	Rbm19	99	76.859	ENSDNOG00000024534	RBM19	96	77.406	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028656	Rbm19	97	76.907	ENSDORG00000008549	Rbm19	100	76.552	Dipodomys_ordii
MGP_SPRETEiJ_G0028656	Rbm19	66	43.185	FBgn0036018	CG3335	96	39.108	Drosophila_melanogaster
MGP_SPRETEiJ_G0028656	Rbm19	65	94.203	ENSETEG00000016887	-	59	94.203	Echinops_telfairi
MGP_SPRETEiJ_G0028656	Rbm19	86	45.755	ENSEBUG00000008521	-	99	45.843	Eptatretus_burgeri
MGP_SPRETEiJ_G0028656	Rbm19	100	80.702	ENSEASG00005009452	RBM19	100	81.321	Equus_asinus_asinus
MGP_SPRETEiJ_G0028656	Rbm19	100	80.844	ENSECAG00000023716	RBM19	100	81.462	Equus_caballus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.965	ENSELUG00000012561	rbm19	99	57.975	Esox_lucius
MGP_SPRETEiJ_G0028656	Rbm19	100	77.490	ENSFCAG00000002962	RBM19	99	77.732	Felis_catus
MGP_SPRETEiJ_G0028656	Rbm19	98	63.306	ENSFALG00000007768	RBM19	99	63.450	Ficedula_albicollis
MGP_SPRETEiJ_G0028656	Rbm19	100	79.458	ENSFDAG00000004629	RBM19	100	79.771	Fukomys_damarensis
MGP_SPRETEiJ_G0028656	Rbm19	99	58.359	ENSFHEG00000012578	rbm19	99	58.186	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028656	Rbm19	97	57.279	ENSGMOG00000013120	rbm19	100	57.923	Gadus_morhua
MGP_SPRETEiJ_G0028656	Rbm19	97	65.759	ENSGALG00000008289	RBM19	99	64.964	Gallus_gallus
MGP_SPRETEiJ_G0028656	Rbm19	99	58.743	ENSGAFG00000012337	rbm19	99	58.054	Gambusia_affinis
MGP_SPRETEiJ_G0028656	Rbm19	97	59.448	ENSGACG00000009462	rbm19	100	58.466	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028656	Rbm19	62	73.032	ENSGAGG00000019457	RBM19	100	73.534	Gopherus_agassizii
MGP_SPRETEiJ_G0028656	Rbm19	100	80.785	ENSGGOG00000007371	RBM19	100	81.075	Gorilla_gorilla
MGP_SPRETEiJ_G0028656	Rbm19	99	57.261	ENSHBUG00000009047	rbm19	99	58.021	Haplochromis_burtoni
MGP_SPRETEiJ_G0028656	Rbm19	100	80.021	ENSHGLG00000010899	RBM19	100	80.126	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028656	Rbm19	100	79.917	ENSHGLG00100017936	RBM19	100	80.021	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028656	Rbm19	99	59.896	ENSHCOG00000016446	rbm19	99	58.996	Hippocampus_comes
MGP_SPRETEiJ_G0028656	Rbm19	99	58.195	ENSIPUG00000023849	rbm19	99	58.021	Ictalurus_punctatus
MGP_SPRETEiJ_G0028656	Rbm19	99	59.072	ENSKMAG00000014807	rbm19	99	59.771	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.531	ENSLBEG00000012897	rbm19	99	56.712	Labrus_bergylta
MGP_SPRETEiJ_G0028656	Rbm19	71	60.366	ENSLACG00000012030	RBM19	93	62.623	Latimeria_chalumnae
MGP_SPRETEiJ_G0028656	Rbm19	99	62.073	ENSLOCG00000008341	rbm19	100	62.176	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028656	Rbm19	97	77.986	ENSLAFG00000004187	RBM19	100	78.220	Loxodonta_africana
MGP_SPRETEiJ_G0028656	Rbm19	100	80.662	ENSMFAG00000046091	RBM19	100	77.559	Macaca_fascicularis
MGP_SPRETEiJ_G0028656	Rbm19	100	80.765	ENSMMUG00000010496	RBM19	100	81.075	Macaca_mulatta
MGP_SPRETEiJ_G0028656	Rbm19	100	74.974	ENSMNEG00000028452	RBM19	99	79.929	Macaca_nemestrina
MGP_SPRETEiJ_G0028656	Rbm19	100	78.212	ENSMLEG00000034550	RBM19	100	78.109	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028656	Rbm19	99	60.395	ENSMAMG00000014397	rbm19	99	59.896	Mastacembelus_armatus
MGP_SPRETEiJ_G0028656	Rbm19	99	59.385	ENSMZEG00005016607	rbm19	99	59.751	Maylandia_zebra
MGP_SPRETEiJ_G0028656	Rbm19	96	56.284	ENSMGAG00000010087	RBM19	99	55.521	Meleagris_gallopavo
MGP_SPRETEiJ_G0028656	Rbm19	100	90.178	ENSMAUG00000019290	Rbm19	100	91.014	Mesocricetus_auratus
MGP_SPRETEiJ_G0028656	Rbm19	100	81.677	ENSMICG00000014423	RBM19	100	82.213	Microcebus_murinus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.068	ENSMMOG00000017839	rbm19	99	57.307	Mola_mola
MGP_SPRETEiJ_G0028656	Rbm19	99	72.487	ENSMODG00000003597	RBM19	99	73.158	Monodelphis_domestica
MGP_SPRETEiJ_G0028656	Rbm19	99	58.585	ENSMALG00000012647	rbm19	99	58.903	Monopterus_albus
MGP_SPRETEiJ_G0028656	Rbm19	100	98.010	MGP_CAROLIEiJ_G0027656	Rbm19	100	98.010	Mus_caroli
MGP_SPRETEiJ_G0028656	Rbm19	100	98.846	ENSMUSG00000029594	Rbm19	100	98.846	Mus_musculus
MGP_SPRETEiJ_G0028656	Rbm19	100	95.698	MGP_PahariEiJ_G0024238	Rbm19	100	95.698	Mus_pahari
MGP_SPRETEiJ_G0028656	Rbm19	100	76.947	ENSMPUG00000002694	RBM19	99	78.579	Mustela_putorius_furo
MGP_SPRETEiJ_G0028656	Rbm19	100	80.573	ENSMLUG00000015075	RBM19	100	80.777	Myotis_lucifugus
MGP_SPRETEiJ_G0028656	Rbm19	99	85.031	ENSNGAG00000009076	Rbm19	99	85.655	Nannospalax_galili
MGP_SPRETEiJ_G0028656	Rbm19	99	58.058	ENSNBRG00000005913	rbm19	99	59.124	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028656	Rbm19	100	80.662	ENSNLEG00000000190	RBM19	100	80.972	Nomascus_leucogenys
MGP_SPRETEiJ_G0028656	Rbm19	92	68.936	ENSMEUG00000004045	RBM19	92	68.936	Notamacropus_eugenii
MGP_SPRETEiJ_G0028656	Rbm19	100	78.364	ENSOPRG00000012064	RBM19	100	78.468	Ochotona_princeps
MGP_SPRETEiJ_G0028656	Rbm19	100	77.140	ENSODEG00000012977	RBM19	100	77.638	Octodon_degus
MGP_SPRETEiJ_G0028656	Rbm19	100	60.663	ENSONIG00000013576	rbm19	100	61.123	Oreochromis_niloticus
MGP_SPRETEiJ_G0028656	Rbm19	100	76.739	ENSOCUG00000009398	RBM19	100	77.081	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028656	Rbm19	99	58.359	ENSORLG00000008077	rbm19	99	58.635	Oryzias_latipes
MGP_SPRETEiJ_G0028656	Rbm19	98	57.664	ENSORLG00020013187	rbm19	99	58.157	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028656	Rbm19	99	57.911	ENSORLG00015001774	rbm19	99	58.125	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028656	Rbm19	99	58.916	ENSOMEG00000003334	rbm19	99	58.065	Oryzias_melastigma
MGP_SPRETEiJ_G0028656	Rbm19	93	80.488	ENSOGAG00000000602	RBM19	100	79.907	Otolemur_garnettii
MGP_SPRETEiJ_G0028656	Rbm19	100	78.898	ENSOARG00000006827	RBM19	100	80.124	Ovis_aries
MGP_SPRETEiJ_G0028656	Rbm19	100	80.992	ENSPPAG00000043712	RBM19	100	81.282	Pan_paniscus
MGP_SPRETEiJ_G0028656	Rbm19	100	77.386	ENSPPRG00000023027	RBM19	99	78.112	Panthera_pardus
MGP_SPRETEiJ_G0028656	Rbm19	100	70.777	ENSPTIG00000011096	RBM19	100	70.945	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028656	Rbm19	100	80.785	ENSPTRG00000005494	RBM19	100	81.075	Pan_troglodytes
MGP_SPRETEiJ_G0028656	Rbm19	100	80.765	ENSPANG00000004795	RBM19	99	77.754	Papio_anubis
MGP_SPRETEiJ_G0028656	Rbm19	99	57.944	ENSPKIG00000017095	rbm19	99	57.944	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028656	Rbm19	89	65.943	ENSPSIG00000008191	RBM19	99	64.719	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028656	Rbm19	83	61.842	ENSPMGG00000019087	rbm19	100	60.555	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028656	Rbm19	100	90.157	ENSPEMG00000018058	Rbm19	100	90.262	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028656	Rbm19	99	73.395	ENSPCIG00000028861	RBM19	100	73.520	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.873	ENSPFOG00000015300	rbm19	99	58.342	Poecilia_formosa
MGP_SPRETEiJ_G0028656	Rbm19	99	58.498	ENSPLAG00000000059	rbm19	99	58.342	Poecilia_latipinna
MGP_SPRETEiJ_G0028656	Rbm19	99	57.143	ENSPMEG00000018585	rbm19	97	63.240	Poecilia_mexicana
MGP_SPRETEiJ_G0028656	Rbm19	99	58.854	ENSPREG00000000978	rbm19	99	58.964	Poecilia_reticulata
MGP_SPRETEiJ_G0028656	Rbm19	100	77.996	ENSPPYG00000004993	RBM19	100	78.202	Pongo_abelii
MGP_SPRETEiJ_G0028656	Rbm19	59	77.447	ENSPCAG00000005063	-	59	77.447	Procavia_capensis
MGP_SPRETEiJ_G0028656	Rbm19	100	81.366	ENSPCOG00000016190	RBM19	100	81.263	Propithecus_coquereli
MGP_SPRETEiJ_G0028656	Rbm19	100	77.652	ENSPVAG00000011618	RBM19	99	78.682	Pteropus_vampyrus
MGP_SPRETEiJ_G0028656	Rbm19	99	57.857	ENSPNYG00000017434	rbm19	99	58.642	Pundamilia_nyererei
MGP_SPRETEiJ_G0028656	Rbm19	99	58.178	ENSPNAG00000012069	rbm19	99	59.583	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028656	Rbm19	100	93.613	ENSRNOG00000001397	Rbm19	100	93.613	Rattus_norvegicus
MGP_SPRETEiJ_G0028656	Rbm19	100	79.835	ENSRBIG00000041419	RBM19	100	79.111	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028656	Rbm19	100	79.628	ENSRROG00000031938	RBM19	100	80.455	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028656	Rbm19	71	38.388	YPR112C	-	77	37.885	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028656	Rbm19	100	77.663	ENSSBOG00000021434	-	100	77.766	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028656	Rbm19	88	70.671	ENSSBOG00000022679	-	99	69.575	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028656	Rbm19	99	72.794	ENSSHAG00000012256	RBM19	100	72.832	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028656	Rbm19	99	56.575	ENSSFOG00015005124	rbm19	99	57.421	Scleropages_formosus
MGP_SPRETEiJ_G0028656	Rbm19	99	59.688	ENSSMAG00000011828	rbm19	99	59.459	Scophthalmus_maximus
MGP_SPRETEiJ_G0028656	Rbm19	99	60.207	ENSSDUG00000013544	rbm19	99	59.317	Seriola_dumerili
MGP_SPRETEiJ_G0028656	Rbm19	87	64.126	ENSSLDG00000025413	rbm19	99	56.481	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028656	Rbm19	61	71.672	ENSSPUG00000011064	RBM19	98	71.672	Sphenodon_punctatus
MGP_SPRETEiJ_G0028656	Rbm19	97	58.075	ENSSPAG00000018685	rbm19	98	58.075	Stegastes_partitus
MGP_SPRETEiJ_G0028656	Rbm19	100	80.582	ENSSSCG00000009868	RBM19	100	81.101	Sus_scrofa
MGP_SPRETEiJ_G0028656	Rbm19	99	65.732	ENSTGUG00000009017	RBM19	100	65.869	Taeniopygia_guttata
MGP_SPRETEiJ_G0028656	Rbm19	99	58.689	ENSTRUG00000016032	rbm19	99	59.067	Takifugu_rubripes
MGP_SPRETEiJ_G0028656	Rbm19	77	88.235	ENSTBEG00000000703	RBM19	73	91.803	Tupaia_belangeri
MGP_SPRETEiJ_G0028656	Rbm19	84	76.433	ENSTTRG00000003987	RBM19	85	76.752	Tursiops_truncatus
MGP_SPRETEiJ_G0028656	Rbm19	99	77.859	ENSUAMG00000002076	RBM19	99	78.690	Ursus_americanus
MGP_SPRETEiJ_G0028656	Rbm19	99	78.238	ENSUMAG00000010816	RBM19	100	79.067	Ursus_maritimus
MGP_SPRETEiJ_G0028656	Rbm19	100	78.498	ENSVVUG00000007886	RBM19	99	78.594	Vulpes_vulpes
MGP_SPRETEiJ_G0028656	Rbm19	99	60.748	ENSXETG00000017668	rbm19	99	61.626	Xenopus_tropicalis
MGP_SPRETEiJ_G0028656	Rbm19	99	58.359	ENSXCOG00000016995	rbm19	69	63.348	Xiphophorus_couchianus
MGP_SPRETEiJ_G0028656	Rbm19	99	58.768	ENSXMAG00000007641	rbm19	99	57.736	Xiphophorus_maculatus