EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028665 (Gene tree)
Gene ID: -
Gene Symbol: Ddx54
Alias: 2410015A15Rik|APR-5|DP97
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 17819 bases
Position: chr5:119936627-119954445
Accession: 1919240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073050	DBP10CT	PF08147.12	3.4e-18	1	1
MGP_SPRETEiJ_P0073050	ResIII	PF04851.15	2.3e-06	1	1
MGP_SPRETEiJ_P0073050	DEAD	PF00270.29	1.4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073050	-	4318	-	MGP_SPRETEiJ_P0073050	876 (aa)	-	-
MGP_SPRETEiJ_T0073051	-	4317	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073052	-	845	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073053	-	471	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028665	Ddx54	50	32.366	MGP_SPRETEiJ_G0015336	Ddx18	64	32.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028665	Ddx54	100	84.389	ENSG00000123064	DDX54	100	97.115	Homo_sapiens
MGP_SPRETEiJ_G0028665	Ddx54	95	62.338	ENSAPOG00000008602	ddx54	98	62.209	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028665	Ddx54	96	86.439	ENSAMEG00000008775	DDX54	99	83.750	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028665	Ddx54	96	62.282	ENSACIG00000019104	ddx54	98	62.165	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028665	Ddx54	95	62.293	ENSAOCG00000008449	ddx54	98	62.165	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028665	Ddx54	95	62.293	ENSAPEG00000014287	ddx54	98	62.165	Amphiprion_percula
MGP_SPRETEiJ_G0028665	Ddx54	95	62.456	ENSATEG00000018529	ddx54	97	62.720	Anabas_testudineus
MGP_SPRETEiJ_G0028665	Ddx54	93	70.122	ENSAPLG00000013191	DDX54	100	70.122	Anas_platyrhynchos
MGP_SPRETEiJ_G0028665	Ddx54	92	69.109	ENSACAG00000004703	DDX54	96	68.331	Anolis_carolinensis
MGP_SPRETEiJ_G0028665	Ddx54	100	74.803	ENSANAG00000032761	-	100	74.241	Aotus_nancymaae
MGP_SPRETEiJ_G0028665	Ddx54	89	76.538	ENSANAG00000032241	-	95	76.073	Aotus_nancymaae
MGP_SPRETEiJ_G0028665	Ddx54	97	61.949	ENSACLG00000013176	ddx54	98	61.932	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028665	Ddx54	97	62.326	ENSAMXG00000009189	ddx54	98	61.610	Astyanax_mexicanus
MGP_SPRETEiJ_G0028665	Ddx54	100	84.755	ENSBTAG00000011930	DDX54	95	84.694	Bos_taurus
MGP_SPRETEiJ_G0028665	Ddx54	87	45.120	WBGene00022378	Y94H6A.5	93	45.063	Caenorhabditis_elegans
MGP_SPRETEiJ_G0028665	Ddx54	93	83.883	ENSCJAG00000010039	DDX54	88	84.005	Callithrix_jacchus
MGP_SPRETEiJ_G0028665	Ddx54	65	81.533	ENSCAFG00000009029	DDX54	99	81.359	Canis_familiaris
MGP_SPRETEiJ_G0028665	Ddx54	100	84.694	ENSCAFG00020017643	DDX54	100	84.807	Canis_lupus_dingo
MGP_SPRETEiJ_G0028665	Ddx54	100	83.107	ENSCHIG00000026798	DDX54	100	82.413	Capra_hircus
MGP_SPRETEiJ_G0028665	Ddx54	99	79.299	ENSTSYG00000007898	DDX54	94	82.609	Carlito_syrichta
MGP_SPRETEiJ_G0028665	Ddx54	93	83.985	ENSCAPG00000001482	DDX54	99	80.024	Cavia_aperea
MGP_SPRETEiJ_G0028665	Ddx54	100	84.773	ENSCPOG00000020649	DDX54	100	84.773	Cavia_porcellus
MGP_SPRETEiJ_G0028665	Ddx54	100	84.449	ENSCCAG00000022625	DDX54	100	84.336	Cebus_capucinus
MGP_SPRETEiJ_G0028665	Ddx54	100	83.729	ENSCATG00000041943	DDX54	100	83.842	Cercocebus_atys
MGP_SPRETEiJ_G0028665	Ddx54	100	83.219	ENSCLAG00000010748	DDX54	100	83.105	Chinchilla_lanigera
MGP_SPRETEiJ_G0028665	Ddx54	99	78.744	ENSCSAG00000002432	DDX54	93	81.733	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028665	Ddx54	75	64.444	ENSCPBG00000017982	DDX54	85	64.662	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028665	Ddx54	86	52.412	ENSCING00000004789	-	94	52.246	Ciona_intestinalis
MGP_SPRETEiJ_G0028665	Ddx54	88	51.799	ENSCSAVG00000008916	-	98	67.169	Ciona_savignyi
MGP_SPRETEiJ_G0028665	Ddx54	88	96.186	ENSCANG00000020637	DDX54	100	96.186	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028665	Ddx54	100	92.123	ENSCGRG00001014803	Ddx54	100	92.123	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028665	Ddx54	100	92.237	ENSCGRG00000002827	Ddx54	100	92.237	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028665	Ddx54	95	60.424	ENSCSEG00000016462	ddx54	98	60.277	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028665	Ddx54	97	60.855	ENSCVAG00000022404	ddx54	98	60.950	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028665	Ddx54	97	63.384	ENSDARG00000105286	ddx54	98	63.152	Danio_rerio
MGP_SPRETEiJ_G0028665	Ddx54	100	83.352	ENSDNOG00000032913	DDX54	100	83.352	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028665	Ddx54	80	83.286	ENSDORG00000003399	Ddx54	95	83.143	Dipodomys_ordii
MGP_SPRETEiJ_G0028665	Ddx54	80	44.912	FBgn0052344	CG32344	88	44.459	Drosophila_melanogaster
MGP_SPRETEiJ_G0028665	Ddx54	50	95.890	ENSETEG00000008430	-	53	95.890	Echinops_telfairi
MGP_SPRETEiJ_G0028665	Ddx54	80	58.438	ENSEBUG00000008886	ddx54	97	58.916	Eptatretus_burgeri
MGP_SPRETEiJ_G0028665	Ddx54	100	76.045	ENSEASG00005009501	DDX54	100	76.654	Equus_asinus_asinus
MGP_SPRETEiJ_G0028665	Ddx54	100	84.258	ENSECAG00000012890	DDX54	100	84.502	Equus_caballus
MGP_SPRETEiJ_G0028665	Ddx54	68	94.937	ENSEEUG00000008296	-	61	94.937	Erinaceus_europaeus
MGP_SPRETEiJ_G0028665	Ddx54	96	61.700	ENSELUG00000013533	ddx54	98	61.680	Esox_lucius
MGP_SPRETEiJ_G0028665	Ddx54	100	83.636	ENSFCAG00000027806	DDX54	100	83.560	Felis_catus
MGP_SPRETEiJ_G0028665	Ddx54	91	70.771	ENSFALG00000007737	DDX54	100	70.647	Ficedula_albicollis
MGP_SPRETEiJ_G0028665	Ddx54	90	88.720	ENSFDAG00000019953	DDX54	100	88.323	Fukomys_damarensis
MGP_SPRETEiJ_G0028665	Ddx54	97	60.976	ENSFHEG00000018425	ddx54	98	61.072	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028665	Ddx54	94	59.102	ENSGMOG00000011746	ddx54	95	60.902	Gadus_morhua
MGP_SPRETEiJ_G0028665	Ddx54	93	69.964	ENSGALG00000007490	DDX54	97	68.999	Gallus_gallus
MGP_SPRETEiJ_G0028665	Ddx54	96	60.563	ENSGAFG00000010336	ddx54	98	60.987	Gambusia_affinis
MGP_SPRETEiJ_G0028665	Ddx54	93	59.693	ENSGACG00000016793	ddx54	95	59.857	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028665	Ddx54	94	70.061	ENSGAGG00000022803	DDX54	100	69.250	Gopherus_agassizii
MGP_SPRETEiJ_G0028665	Ddx54	100	84.520	ENSGGOG00000010414	DDX54	100	83.484	Gorilla_gorilla
MGP_SPRETEiJ_G0028665	Ddx54	100	84.755	ENSHGLG00000014411	DDX54	100	84.580	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028665	Ddx54	100	84.755	ENSHGLG00100018511	DDX54	100	84.580	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028665	Ddx54	97	61.369	ENSHCOG00000019287	ddx54	98	61.137	Hippocampus_comes
MGP_SPRETEiJ_G0028665	Ddx54	96	62.033	ENSIPUG00000015556	Ddx54	98	62.282	Ictalurus_punctatus
MGP_SPRETEiJ_G0028665	Ddx54	87	85.545	ENSSTOG00000004068	DDX54	100	85.861	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028665	Ddx54	99	88.092	ENSJJAG00000015712	Ddx54	100	87.799	Jaculus_jaculus
MGP_SPRETEiJ_G0028665	Ddx54	97	60.981	ENSKMAG00000017520	ddx54	98	61.348	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028665	Ddx54	96	58.723	ENSLBEG00000019480	ddx54	98	59.907	Labrus_bergylta
MGP_SPRETEiJ_G0028665	Ddx54	95	65.836	ENSLACG00000008944	DDX54	96	65.578	Latimeria_chalumnae
MGP_SPRETEiJ_G0028665	Ddx54	96	64.630	ENSLOCG00000008485	ddx54	98	64.858	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028665	Ddx54	89	74.222	ENSLAFG00000027782	DDX54	100	74.037	Loxodonta_africana
MGP_SPRETEiJ_G0028665	Ddx54	100	83.860	ENSMFAG00000043636	DDX54	100	83.973	Macaca_fascicularis
MGP_SPRETEiJ_G0028665	Ddx54	100	83.070	ENSMMUG00000021795	DDX54	100	83.409	Macaca_mulatta
MGP_SPRETEiJ_G0028665	Ddx54	100	76.637	ENSMNEG00000043605	DDX54	100	76.862	Macaca_nemestrina
MGP_SPRETEiJ_G0028665	Ddx54	96	80.539	ENSMLEG00000038981	DDX54	98	80.207	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028665	Ddx54	97	61.653	ENSMAMG00000012784	ddx54	98	61.833	Mastacembelus_armatus
MGP_SPRETEiJ_G0028665	Ddx54	97	61.610	ENSMZEG00005018773	ddx54	98	61.593	Maylandia_zebra
MGP_SPRETEiJ_G0028665	Ddx54	93	69.471	ENSMGAG00000009183	DDX54	100	68.675	Meleagris_gallopavo
MGP_SPRETEiJ_G0028665	Ddx54	100	92.237	ENSMAUG00000011051	Ddx54	100	92.237	Mesocricetus_auratus
MGP_SPRETEiJ_G0028665	Ddx54	100	83.732	ENSMICG00000012217	DDX54	100	83.618	Microcebus_murinus
MGP_SPRETEiJ_G0028665	Ddx54	100	92.009	ENSMOCG00000010835	Ddx54	100	92.009	Microtus_ochrogaster
MGP_SPRETEiJ_G0028665	Ddx54	95	60.357	ENSMMOG00000009634	ddx54	98	59.790	Mola_mola
MGP_SPRETEiJ_G0028665	Ddx54	95	75.089	ENSMODG00000003413	DDX54	99	75.476	Monodelphis_domestica
MGP_SPRETEiJ_G0028665	Ddx54	96	62.911	ENSMALG00000022098	ddx54	98	62.911	Monopterus_albus
MGP_SPRETEiJ_G0028665	Ddx54	100	97.948	MGP_CAROLIEiJ_G0027665	Ddx54	100	97.948	Mus_caroli
MGP_SPRETEiJ_G0028665	Ddx54	100	99.087	ENSMUSG00000029599	Ddx54	100	99.087	Mus_musculus
MGP_SPRETEiJ_G0028665	Ddx54	100	97.719	MGP_PahariEiJ_G0024247	Ddx54	100	97.719	Mus_pahari
MGP_SPRETEiJ_G0028665	Ddx54	100	83.655	ENSMPUG00000002574	DDX54	100	83.787	Mustela_putorius_furo
MGP_SPRETEiJ_G0028665	Ddx54	100	87.500	ENSNGAG00000021313	Ddx54	100	87.727	Nannospalax_galili
MGP_SPRETEiJ_G0028665	Ddx54	77	63.551	ENSNBRG00000005588	ddx54	91	63.534	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028665	Ddx54	100	84.904	ENSNLEG00000000162	DDX54	100	84.563	Nomascus_leucogenys
MGP_SPRETEiJ_G0028665	Ddx54	80	76.109	ENSMEUG00000015392	DDX54	98	77.876	Notamacropus_eugenii
MGP_SPRETEiJ_G0028665	Ddx54	91	77.851	ENSOPRG00000012000	DDX54	92	77.411	Ochotona_princeps
MGP_SPRETEiJ_G0028665	Ddx54	100	81.001	ENSODEG00000014863	DDX54	100	80.887	Octodon_degus
MGP_SPRETEiJ_G0028665	Ddx54	100	83.164	ENSOCUG00000008932	DDX54	100	83.145	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028665	Ddx54	97	61.220	ENSORLG00000007385	ddx54	97	61.222	Oryzias_latipes
MGP_SPRETEiJ_G0028665	Ddx54	97	61.636	ENSORLG00020000858	ddx54	97	61.575	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028665	Ddx54	97	61.105	ENSORLG00015006956	ddx54	97	61.222	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028665	Ddx54	93	62.710	ENSOMEG00000003663	ddx54	98	62.005	Oryzias_melastigma
MGP_SPRETEiJ_G0028665	Ddx54	100	85.080	ENSOGAG00000004210	DDX54	100	84.983	Otolemur_garnettii
MGP_SPRETEiJ_G0028665	Ddx54	100	83.560	ENSOARG00000008363	DDX54	100	83.070	Ovis_aries
MGP_SPRETEiJ_G0028665	Ddx54	100	83.202	ENSPPAG00000042178	DDX54	100	82.976	Pan_paniscus
MGP_SPRETEiJ_G0028665	Ddx54	100	81.818	ENSPPRG00000005223	DDX54	100	81.993	Panthera_pardus
MGP_SPRETEiJ_G0028665	Ddx54	73	73.366	ENSPTIG00000019728	DDX54	86	74.092	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028665	Ddx54	100	83.710	ENSPTRG00000005483	DDX54	100	83.258	Pan_troglodytes
MGP_SPRETEiJ_G0028665	Ddx54	100	83.296	ENSPANG00000008883	DDX54	100	83.634	Papio_anubis
MGP_SPRETEiJ_G0028665	Ddx54	96	63.423	ENSPKIG00000018272	ddx54	96	63.423	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028665	Ddx54	54	80.638	ENSPSIG00000005055	DDX54	96	80.467	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028665	Ddx54	93	60.562	ENSPMGG00000010988	ddx54	99	60.147	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028665	Ddx54	100	93.151	ENSPEMG00000016701	Ddx54	100	93.151	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028665	Ddx54	97	61.583	ENSPFOG00000019822	ddx54	97	62.191	Poecilia_formosa
MGP_SPRETEiJ_G0028665	Ddx54	97	60.694	ENSPLAG00000004530	ddx54	97	61.340	Poecilia_latipinna
MGP_SPRETEiJ_G0028665	Ddx54	97	60.578	ENSPMEG00000010803	ddx54	97	61.222	Poecilia_mexicana
MGP_SPRETEiJ_G0028665	Ddx54	97	60.885	ENSPREG00000014372	ddx54	97	61.249	Poecilia_reticulata
MGP_SPRETEiJ_G0028665	Ddx54	100	84.199	ENSPPYG00000004984	DDX54	100	84.312	Pongo_abelii
MGP_SPRETEiJ_G0028665	Ddx54	100	78.132	ENSPCAG00000008462	DDX54	100	77.980	Procavia_capensis
MGP_SPRETEiJ_G0028665	Ddx54	100	84.607	ENSPCOG00000006050	DDX54	100	84.721	Propithecus_coquereli
MGP_SPRETEiJ_G0028665	Ddx54	93	87.973	ENSPVAG00000017347	DDX54	100	73.151	Pteropus_vampyrus
MGP_SPRETEiJ_G0028665	Ddx54	97	59.535	ENSPNAG00000014459	ddx54	95	65.309	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028665	Ddx54	100	95.091	ENSRNOG00000001377	Ddx54	96	95.091	Rattus_norvegicus
MGP_SPRETEiJ_G0028665	Ddx54	100	83.878	ENSRBIG00000032535	DDX54	100	83.315	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028665	Ddx54	100	78.805	ENSRROG00000029557	DDX54	100	79.594	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028665	Ddx54	87	36.058	YDL031W	-	81	36.765	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028665	Ddx54	100	84.014	ENSSBOG00000028194	DDX54	100	84.354	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028665	Ddx54	94	72.937	ENSSHAG00000015646	DDX54	100	73.576	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028665	Ddx54	97	62.645	ENSSFOG00015014981	ddx54	98	62.194	Scleropages_formosus
MGP_SPRETEiJ_G0028665	Ddx54	94	58.893	ENSSMAG00000003210	ddx54	98	59.328	Scophthalmus_maximus
MGP_SPRETEiJ_G0028665	Ddx54	94	60.915	ENSSDUG00000004474	ddx54	98	60.690	Seriola_dumerili
MGP_SPRETEiJ_G0028665	Ddx54	95	59.884	ENSSLDG00000010380	ddx54	98	59.886	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028665	Ddx54	96	69.076	ENSSPUG00000014141	DDX54	97	68.521	Sphenodon_punctatus
MGP_SPRETEiJ_G0028665	Ddx54	90	62.782	ENSSPAG00000022918	ddx54	97	62.015	Stegastes_partitus
MGP_SPRETEiJ_G0028665	Ddx54	100	85.131	ENSSSCG00000009876	DDX54	100	84.921	Sus_scrofa
MGP_SPRETEiJ_G0028665	Ddx54	92	69.853	ENSTGUG00000009126	DDX54	100	69.485	Taeniopygia_guttata
MGP_SPRETEiJ_G0028665	Ddx54	96	60.784	ENSTRUG00000014939	ddx54	98	60.554	Takifugu_rubripes
MGP_SPRETEiJ_G0028665	Ddx54	96	62.191	ENSTNIG00000009037	ddx54	98	61.720	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028665	Ddx54	73	92.978	ENSTBEG00000003783	DDX54	79	92.978	Tupaia_belangeri
MGP_SPRETEiJ_G0028665	Ddx54	97	80.958	ENSTTRG00000016678	DDX54	100	80.452	Tursiops_truncatus
MGP_SPRETEiJ_G0028665	Ddx54	100	84.205	ENSUAMG00000028387	DDX54	100	83.878	Ursus_americanus
MGP_SPRETEiJ_G0028665	Ddx54	88	88.991	ENSUMAG00000010245	DDX54	93	94.286	Ursus_maritimus
MGP_SPRETEiJ_G0028665	Ddx54	100	84.807	ENSVVUG00000010212	DDX54	100	84.921	Vulpes_vulpes
MGP_SPRETEiJ_G0028665	Ddx54	97	63.457	ENSXETG00000016410	ddx54	98	62.674	Xenopus_tropicalis
MGP_SPRETEiJ_G0028665	Ddx54	95	61.584	ENSXCOG00000002909	ddx54	97	61.493	Xiphophorus_couchianus
MGP_SPRETEiJ_G0028665	Ddx54	95	61.584	ENSXMAG00000005312	ddx54	97	61.256	Xiphophorus_maculatus