EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028671 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 10022 bases
Position: chr5:120145921-120155942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073074	OAS1_C	PF10421.9	4.3e-49	1	1
MGP_SPRETEiJ_P0073075	OAS1_C	PF10421.9	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073074	-	1261	-	MGP_SPRETEiJ_P0073074	161 (aa)	-	-
MGP_SPRETEiJ_T0073075	-	361	-	MGP_SPRETEiJ_P0073075	39 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028671	-	100	51.220	MGP_SPRETEiJ_G0028669	Oas2	61	42.282
MGP_SPRETEiJ_G0028671	-	92	62.162	MGP_SPRETEiJ_G0028670	Oas3	57	43.421
MGP_SPRETEiJ_G0028671	-	92	86.111	MGP_SPRETEiJ_G0028673	-	71	60.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028671	-	100	63.158	ENSG00000111331	OAS3	66	41.379	Homo_sapiens
MGP_SPRETEiJ_G0028671	-	100	71.795	ENSG00000089127	OAS1	51	53.416	Homo_sapiens
MGP_SPRETEiJ_G0028671	-	100	76.923	ENSCGRG00000006049	-	98	75.926	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028671	-	100	82.051	ENSJJAG00000005317	-	100	53.947	Jaculus_jaculus
MGP_SPRETEiJ_G0028671	-	100	50.000	MGP_CAROLIEiJ_G0027669	Oas2	61	41.892	Mus_caroli
MGP_SPRETEiJ_G0028671	-	100	79.487	MGP_CAROLIEiJ_G0027673	-	61	66.667	Mus_caroli
MGP_SPRETEiJ_G0028671	-	100	79.487	MGP_CAROLIEiJ_G0027672	-	61	66.667	Mus_caroli
MGP_SPRETEiJ_G0028671	-	100	97.436	MGP_CAROLIEiJ_G0027671	-	100	97.436	Mus_caroli
MGP_SPRETEiJ_G0028671	-	92	62.162	MGP_CAROLIEiJ_G0027670	Oas3	57	43.421	Mus_caroli
MGP_SPRETEiJ_G0028671	-	92	86.111	MGP_CAROLIEiJ_G0027675	-	53	57.051	Mus_caroli
MGP_SPRETEiJ_G0028671	-	91	46.154	ENSMUSG00000032690	Oas2	61	41.611	Mus_musculus
MGP_SPRETEiJ_G0028671	-	92	62.162	ENSMUSG00000032661	Oas3	57	43.421	Mus_musculus
MGP_SPRETEiJ_G0028671	-	100	97.436	ENSMUSG00000001166	Oas1c	100	97.436	Mus_musculus
MGP_SPRETEiJ_G0028671	-	81	44.361	MGP_PahariEiJ_G0024251	-	54	44.361	Mus_pahari
MGP_SPRETEiJ_G0028671	-	100	60.526	MGP_PahariEiJ_G0024252	Oas3	57	43.421	Mus_pahari
MGP_SPRETEiJ_G0028671	-	100	55.814	ENSNGAG00000005163	Oas3	56	44.595	Nannospalax_galili