EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028730 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc8
Alias: 5730565F05Rik
Full Name: zinc finger%2C CCHC domain containing 8
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 22778 bases
Position: chr5:123367280-123390057
Accession: 1917900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073446	zf-CCHC	PF00098.23	1.9e-05	1	1
MGP_SPRETEiJ_P0073441	zf-CCHC	PF00098.23	0.00022	1	1
MGP_SPRETEiJ_P0073442	zf-CCHC	PF00098.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073447	-	690	-	MGP_SPRETEiJ_P0073447	172 (aa)	-	-
MGP_SPRETEiJ_T0073446	-	530	-	MGP_SPRETEiJ_P0073446	102 (aa)	-	-
MGP_SPRETEiJ_T0073445	-	734	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073444	-	751	-	MGP_SPRETEiJ_P0073444	104 (aa)	-	-
MGP_SPRETEiJ_T0073443	-	1869	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0073442	-	4326	-	MGP_SPRETEiJ_P0073442	709 (aa)	-	-
MGP_SPRETEiJ_T0073441	-	4598	-	MGP_SPRETEiJ_P0073441	709 (aa)	-	-
MGP_SPRETEiJ_T0073449	-	321	-	MGP_SPRETEiJ_P0073449	107 (aa)	-	-
MGP_SPRETEiJ_T0073448	-	506	-	MGP_SPRETEiJ_P0073448	53 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.747	ENSG00000033030	ZCCHC8	100	89.474	Homo_sapiens
MGP_SPRETEiJ_G0028730	Zcchc8	100	78.042	ENSAMEG00000014731	ZCCHC8	100	77.902	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028730	Zcchc8	78	67.500	ENSACIG00000002185	zcchc8	100	37.931	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028730	Zcchc8	79	89.024	ENSAPLG00000007582	ZCCHC8	99	59.671	Anas_platyrhynchos
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.591	ENSANAG00000035627	ZCCHC8	100	80.450	Aotus_nancymaae
MGP_SPRETEiJ_G0028730	Zcchc8	100	81.742	ENSBTAG00000006114	ZCCHC8	100	81.601	Bos_taurus
MGP_SPRETEiJ_G0028730	Zcchc8	100	77.700	ENSCJAG00000020409	ZCCHC8	100	78.261	Callithrix_jacchus
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.529	ENSCAFG00000007859	ZCCHC8	100	81.066	Canis_familiaris
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.778	ENSCAFG00020016406	ZCCHC8	99	81.291	Canis_lupus_dingo
MGP_SPRETEiJ_G0028730	Zcchc8	100	81.818	ENSCHIG00000000649	ZCCHC8	100	81.678	Capra_hircus
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.325	ENSTSYG00000011362	ZCCHC8	100	79.325	Carlito_syrichta
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSCAPG00000017455	ZCCHC8	99	78.947	Cavia_aperea
MGP_SPRETEiJ_G0028730	Zcchc8	99	78.303	ENSCPOG00000014385	ZCCHC8	99	78.999	Cavia_porcellus
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.606	ENSCCAG00000028625	ZCCHC8	100	79.606	Cebus_capucinus
MGP_SPRETEiJ_G0028730	Zcchc8	100	78.903	ENSCATG00000041134	ZCCHC8	100	78.903	Cercocebus_atys
MGP_SPRETEiJ_G0028730	Zcchc8	100	74.090	ENSCSAG00000002121	ZCCHC8	100	74.090	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028730	Zcchc8	79	91.358	ENSCPBG00000002676	ZCCHC8	100	62.162	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028730	Zcchc8	100	90.409	ENSCGRG00001023706	Zcchc8	100	90.268	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028730	Zcchc8	100	90.409	ENSCGRG00000015199	Zcchc8	100	90.268	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028730	Zcchc8	80	95.122	ENSDNOG00000046140	-	100	82.266	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.478	ENSDORG00000008756	Zcchc8	100	80.056	Dipodomys_ordii
MGP_SPRETEiJ_G0028730	Zcchc8	80	93.902	ENSETEG00000004735	ZCCHC8	89	73.540	Echinops_telfairi
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSEASG00005012441	ZCCHC8	97	80.640	Equus_asinus_asinus
MGP_SPRETEiJ_G0028730	Zcchc8	99	80.932	ENSECAG00000006984	ZCCHC8	100	80.309	Equus_caballus
MGP_SPRETEiJ_G0028730	Zcchc8	100	83.006	ENSFCAG00000027671	ZCCHC8	100	82.865	Felis_catus
MGP_SPRETEiJ_G0028730	Zcchc8	79	88.889	ENSFALG00000009102	ZCCHC8	99	60.572	Ficedula_albicollis
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSFDAG00000010964	ZCCHC8	87	88.300	Fukomys_damarensis
MGP_SPRETEiJ_G0028730	Zcchc8	79	87.654	ENSGALG00000004486	ZCCHC8	99	61.058	Gallus_gallus
MGP_SPRETEiJ_G0028730	Zcchc8	78	61.250	ENSGACG00000008163	zcchc8	99	41.905	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028730	Zcchc8	79	92.593	ENSGAGG00000007842	ZCCHC8	100	61.892	Gopherus_agassizii
MGP_SPRETEiJ_G0028730	Zcchc8	100	83.685	ENSSTOG00000001683	ZCCHC8	100	83.544	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSJJAG00000011650	Zcchc8	100	81.195	Jaculus_jaculus
MGP_SPRETEiJ_G0028730	Zcchc8	100	77.127	ENSLAFG00000016477	ZCCHC8	100	76.848	Loxodonta_africana
MGP_SPRETEiJ_G0028730	Zcchc8	100	78.903	ENSMFAG00000045203	ZCCHC8	100	78.903	Macaca_fascicularis
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.044	ENSMMUG00000013643	ZCCHC8	100	79.044	Macaca_mulatta
MGP_SPRETEiJ_G0028730	Zcchc8	100	76.090	ENSMLEG00000031615	ZCCHC8	100	76.090	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028730	Zcchc8	79	86.585	ENSMGAG00000004799	ZCCHC8	99	62.312	Meleagris_gallopavo
MGP_SPRETEiJ_G0028730	Zcchc8	100	90.127	ENSMAUG00000018909	Zcchc8	100	90.127	Mesocricetus_auratus
MGP_SPRETEiJ_G0028730	Zcchc8	100	82.725	ENSMICG00000013486	ZCCHC8	100	82.584	Microcebus_murinus
MGP_SPRETEiJ_G0028730	Zcchc8	79	61.728	ENSMMOG00000017082	zcchc8	99	37.095	Mola_mola
MGP_SPRETEiJ_G0028730	Zcchc8	79	92.593	ENSMODG00000012264	ZCCHC8	100	69.342	Monodelphis_domestica
MGP_SPRETEiJ_G0028730	Zcchc8	100	98.039	MGP_CAROLIEiJ_G0027732	Zcchc8	100	98.039	Mus_caroli
MGP_SPRETEiJ_G0028730	Zcchc8	100	99.295	ENSMUSG00000029427	Zcchc8	100	99.295	Mus_musculus
MGP_SPRETEiJ_G0028730	Zcchc8	100	95.346	MGP_PahariEiJ_G0024312	Zcchc8	100	95.346	Mus_pahari
MGP_SPRETEiJ_G0028730	Zcchc8	99	82.768	ENSMPUG00000001986	ZCCHC8	100	82.278	Mustela_putorius_furo
MGP_SPRETEiJ_G0028730	Zcchc8	100	77.469	ENSMLUG00000005334	ZCCHC8	100	76.356	Myotis_lucifugus
MGP_SPRETEiJ_G0028730	Zcchc8	100	82.123	ENSNGAG00000015385	Zcchc8	100	81.729	Nannospalax_galili
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.944	ENSNLEG00000001723	ZCCHC8	100	79.944	Nomascus_leucogenys
MGP_SPRETEiJ_G0028730	Zcchc8	83	89.412	ENSMEUG00000003497	ZCCHC8	99	70.717	Notamacropus_eugenii
MGP_SPRETEiJ_G0028730	Zcchc8	100	71.888	ENSOPRG00000013758	ZCCHC8	100	71.849	Ochotona_princeps
MGP_SPRETEiJ_G0028730	Zcchc8	84	86.207	ENSOANG00000006199	ZCCHC8	100	64.434	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.224	ENSOCUG00000013759	ZCCHC8	100	80.084	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSOGAG00000015900	ZCCHC8	100	80.597	Otolemur_garnettii
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.529	ENSOARG00000010728	ZCCHC8	100	78.860	Ovis_aries
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.887	ENSPPAG00000044102	ZCCHC8	100	79.887	Pan_paniscus
MGP_SPRETEiJ_G0028730	Zcchc8	100	82.444	ENSPPRG00000023848	ZCCHC8	100	82.303	Panthera_pardus
MGP_SPRETEiJ_G0028730	Zcchc8	100	82.865	ENSPTIG00000017015	ZCCHC8	100	82.725	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.887	ENSPTRG00000005579	ZCCHC8	100	79.887	Pan_troglodytes
MGP_SPRETEiJ_G0028730	Zcchc8	79	90.123	ENSPSIG00000011004	ZCCHC8	94	59.160	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028730	Zcchc8	77	53.165	ENSPMGG00000000988	zcchc8	96	38.354	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028730	Zcchc8	100	89.607	ENSPEMG00000007962	Zcchc8	100	89.607	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028730	Zcchc8	79	93.827	ENSPCIG00000028643	ZCCHC8	99	68.033	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028730	Zcchc8	100	76.934	ENSPPYG00000005068	ZCCHC8	100	76.793	Pongo_abelii
MGP_SPRETEiJ_G0028730	Zcchc8	80	93.902	ENSPCAG00000016551	ZCCHC8	100	71.489	Procavia_capensis
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.073	ENSPCOG00000014512	ZCCHC8	100	77.949	Propithecus_coquereli
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.309	ENSPVAG00000001276	ZCCHC8	100	80.028	Pteropus_vampyrus
MGP_SPRETEiJ_G0028730	Zcchc8	100	92.384	ENSRNOG00000001243	Zcchc8	100	92.243	Rattus_norvegicus
MGP_SPRETEiJ_G0028730	Zcchc8	100	58.824	ENSRBIG00000044855	ZCCHC8	100	58.824	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028730	Zcchc8	100	78.622	ENSRROG00000030441	ZCCHC8	100	78.622	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028730	Zcchc8	100	79.606	ENSSBOG00000032964	ZCCHC8	100	80.131	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028730	Zcchc8	79	90.476	ENSSHAG00000010725	ZCCHC8	99	66.345	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028730	Zcchc8	79	80.247	ENSSFOG00015018295	zcchc8	99	49.200	Scleropages_formosus
MGP_SPRETEiJ_G0028730	Zcchc8	80	90.244	ENSSARG00000003982	ZCCHC8	100	69.048	Sorex_araneus
MGP_SPRETEiJ_G0028730	Zcchc8	79	87.654	ENSSPUG00000011326	ZCCHC8	95	61.037	Sphenodon_punctatus
MGP_SPRETEiJ_G0028730	Zcchc8	100	81.601	ENSSSCG00000009792	ZCCHC8	89	81.461	Sus_scrofa
MGP_SPRETEiJ_G0028730	Zcchc8	79	88.889	ENSTGUG00000006286	ZCCHC8	100	61.810	Taeniopygia_guttata
MGP_SPRETEiJ_G0028730	Zcchc8	79	45.783	ENSTRUG00000008040	zcchc8	93	43.373	Takifugu_rubripes
MGP_SPRETEiJ_G0028730	Zcchc8	78	61.250	ENSTNIG00000015824	zcchc8	99	40.836	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028730	Zcchc8	100	78.511	ENSTTRG00000015809	ZCCHC8	100	78.371	Tursiops_truncatus
MGP_SPRETEiJ_G0028730	Zcchc8	80	96.341	ENSUAMG00000013723	ZCCHC8	97	82.962	Ursus_americanus
MGP_SPRETEiJ_G0028730	Zcchc8	100	82.213	ENSUMAG00000005282	ZCCHC8	100	82.759	Ursus_maritimus
MGP_SPRETEiJ_G0028730	Zcchc8	100	80.084	ENSVVUG00000017779	ZCCHC8	99	80.865	Vulpes_vulpes
MGP_SPRETEiJ_G0028730	Zcchc8	79	82.716	ENSXETG00000007797	zcchc8	99	54.189	Xenopus_tropicalis