EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028742 (Gene tree)
Gene ID: -
Gene Symbol: Arl6ip4
Alias: Aip-4|Srp25
Full Name: ADP-ribosylation factor-like 6 interacting protein 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 2107 bases
Position: chr5:123797172-123799278
Accession: 1929500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073524	SR-25	PF10500.9	9.4e-101	1	1
MGP_SPRETEiJ_P0073526	SR-25	PF10500.9	3.8e-90	1	1
MGP_SPRETEiJ_P0073525	SR-25	PF10500.9	1.2e-87	1	1
MGP_SPRETEiJ_P0073523	SR-25	PF10500.9	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073523	-	461	-	MGP_SPRETEiJ_P0073523	98 (aa)	-	UPI0001611898
MGP_SPRETEiJ_T0073524	-	1191	-	MGP_SPRETEiJ_P0073524	229 (aa)	-	-
MGP_SPRETEiJ_T0073525	-	982	-	MGP_SPRETEiJ_P0073525	200 (aa)	-	-
MGP_SPRETEiJ_T0073526	-	753	-	MGP_SPRETEiJ_P0073526	226 (aa)	-	-
MGP_SPRETEiJ_T0073527	-	294	-	MGP_SPRETEiJ_P0073527	60 (aa)	-	UPI000620AC11

Gene Model

Click here to download MGP_SPRETEiJ_G0028742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028742	Arl6ip4	86	80.198	ENSG00000182196	ARL6IP4	91	79.621	Homo_sapiens
MGP_SPRETEiJ_G0028742	Arl6ip4	90	66.514	ENSAMEG00000015055	-	74	66.055	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028742	Arl6ip4	86	81.000	ENSANAG00000035845	ARL6IP4	91	80.383	Aotus_nancymaae
MGP_SPRETEiJ_G0028742	Arl6ip4	86	85.644	ENSBTAG00000001594	ARL6IP4	91	84.834	Bos_taurus
MGP_SPRETEiJ_G0028742	Arl6ip4	86	76.263	ENSCJAG00000016476	-	91	76.812	Callithrix_jacchus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	74.528	ENSCAFG00000007665	ARL6IP4	91	81.517	Canis_familiaris
MGP_SPRETEiJ_G0028742	Arl6ip4	90	73.934	ENSCAFG00020016288	-	91	80.952	Canis_lupus_dingo
MGP_SPRETEiJ_G0028742	Arl6ip4	86	80.693	ENSCHIG00000014369	-	91	80.095	Capra_hircus
MGP_SPRETEiJ_G0028742	Arl6ip4	86	81.188	ENSTSYG00000030992	ARL6IP4	91	80.569	Carlito_syrichta
MGP_SPRETEiJ_G0028742	Arl6ip4	54	89.815	ENSCAPG00000015583	-	67	88.991	Cavia_aperea
MGP_SPRETEiJ_G0028742	Arl6ip4	90	77.251	ENSCPOG00000031539	-	91	77.251	Cavia_porcellus
MGP_SPRETEiJ_G0028742	Arl6ip4	86	79.500	ENSCCAG00000037235	ARL6IP4	90	78.947	Cebus_capucinus
MGP_SPRETEiJ_G0028742	Arl6ip4	83	81.959	ENSCATG00000000284	-	50	79.524	Cercocebus_atys
MGP_SPRETEiJ_G0028742	Arl6ip4	81	83.069	ENSCATG00000004525	-	91	78.673	Cercocebus_atys
MGP_SPRETEiJ_G0028742	Arl6ip4	53	83.962	ENSCLAG00000008050	-	62	85.849	Chinchilla_lanigera
MGP_SPRETEiJ_G0028742	Arl6ip4	81	78.689	ENSCSAG00000002076	ARL6IP4	59	71.963	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028742	Arl6ip4	81	81.915	ENSCANG00000008517	ARL6IP4	57	75.799	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028742	Arl6ip4	95	84.656	ENSCGRG00001024174	Arl6ip4	90	85.922	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028742	Arl6ip4	95	84.656	ENSCGRG00000002843	Arl6ip4	90	85.922	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028742	Arl6ip4	82	80.952	ENSDNOG00000044908	-	94	81.481	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028742	Arl6ip4	54	96.262	ENSDORG00000023896	Arl6ip4	99	82.955	Dipodomys_ordii
MGP_SPRETEiJ_G0028742	Arl6ip4	77	82.222	ENSETEG00000008410	ARL6IP4	63	76.995	Echinops_telfairi
MGP_SPRETEiJ_G0028742	Arl6ip4	100	79.828	ENSEASG00005012544	-	91	80.000	Equus_asinus_asinus
MGP_SPRETEiJ_G0028742	Arl6ip4	100	79.399	ENSECAG00000023197	ARL6IP4	91	80.000	Equus_caballus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	80.569	ENSFCAG00000006132	-	91	80.569	Felis_catus
MGP_SPRETEiJ_G0028742	Arl6ip4	100	78.632	ENSFDAG00000009535	-	100	78.632	Fukomys_damarensis
MGP_SPRETEiJ_G0028742	Arl6ip4	51	55.882	ENSGMOG00000012151	arl6ip4	54	58.763	Gadus_morhua
MGP_SPRETEiJ_G0028742	Arl6ip4	86	78.095	ENSGGOG00000042717	ARL6IP4	51	77.626	Gorilla_gorilla
MGP_SPRETEiJ_G0028742	Arl6ip4	90	80.095	ENSHGLG00000011726	-	91	80.095	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028742	Arl6ip4	90	80.095	ENSHGLG00100018434	-	91	80.095	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028742	Arl6ip4	86	80.693	ENSSTOG00000010405	-	91	80.569	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028742	Arl6ip4	98	83.077	ENSJJAG00000019114	Arl6ip4	90	84.951	Jaculus_jaculus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	79.717	ENSLAFG00000005314	-	91	80.095	Loxodonta_africana
MGP_SPRETEiJ_G0028742	Arl6ip4	92	72.093	ENSMFAG00000034524	ARL6IP4	62	73.756	Macaca_fascicularis
MGP_SPRETEiJ_G0028742	Arl6ip4	81	81.818	ENSMMUG00000015930	ARL6IP4	86	82.353	Macaca_mulatta
MGP_SPRETEiJ_G0028742	Arl6ip4	83	80.928	ENSMNEG00000015953	ARL6IP4	91	78.571	Macaca_nemestrina
MGP_SPRETEiJ_G0028742	Arl6ip4	52	83.495	ENSMGAG00000003506	ARL6IP4	55	83.495	Meleagris_gallopavo
MGP_SPRETEiJ_G0028742	Arl6ip4	94	83.422	ENSMAUG00000018929	Arl6ip4	90	85.437	Mesocricetus_auratus
MGP_SPRETEiJ_G0028742	Arl6ip4	88	78.641	ENSMICG00000032330	-	90	77.619	Microcebus_murinus
MGP_SPRETEiJ_G0028742	Arl6ip4	95	84.127	ENSMOCG00000001258	Arl6ip4	90	86.893	Microtus_ochrogaster
MGP_SPRETEiJ_G0028742	Arl6ip4	100	98.690	MGP_CAROLIEiJ_G0027744	Arl6ip4	100	98.690	Mus_caroli
MGP_SPRETEiJ_G0028742	Arl6ip4	100	100.000	ENSMUSG00000029404	Arl6ip4	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0028742	Arl6ip4	100	95.610	MGP_PahariEiJ_G0024324	Arl6ip4	100	95.610	Mus_pahari
MGP_SPRETEiJ_G0028742	Arl6ip4	90	81.735	ENSMPUG00000001705	ARL6IP4	75	81.735	Mustela_putorius_furo
MGP_SPRETEiJ_G0028742	Arl6ip4	100	81.223	ENSNGAG00000023492	Arl6ip4	91	84.689	Nannospalax_galili
MGP_SPRETEiJ_G0028742	Arl6ip4	98	66.995	ENSNLEG00000002378	-	91	71.963	Nomascus_leucogenys
MGP_SPRETEiJ_G0028742	Arl6ip4	90	76.303	ENSODEG00000010162	-	91	76.303	Octodon_degus
MGP_SPRETEiJ_G0028742	Arl6ip4	100	55.500	ENSODEG00000015865	-	52	67.890	Octodon_degus
MGP_SPRETEiJ_G0028742	Arl6ip4	52	58.252	ENSORLG00000006213	arl6ip4	92	45.982	Oryzias_latipes
MGP_SPRETEiJ_G0028742	Arl6ip4	52	58.252	ENSORLG00020016925	arl6ip4	50	54.098	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028742	Arl6ip4	52	58.252	ENSORLG00015005448	arl6ip4	92	46.429	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028742	Arl6ip4	97	69.588	ENSOGAG00000015951	-	73	69.903	Otolemur_garnettii
MGP_SPRETEiJ_G0028742	Arl6ip4	81	81.818	ENSOARG00000007010	ARL6IP4	69	76.712	Ovis_aries
MGP_SPRETEiJ_G0028742	Arl6ip4	86	77.143	ENSPPAG00000028900	ARL6IP4	51	76.712	Pan_paniscus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	80.569	ENSPPRG00000003154	-	91	80.569	Panthera_pardus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	75.587	ENSPTIG00000020573	-	91	76.995	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028742	Arl6ip4	86	77.619	ENSPTRG00000005590	ARL6IP4	51	77.169	Pan_troglodytes
MGP_SPRETEiJ_G0028742	Arl6ip4	83	77.895	ENSPANG00000029614	-	90	75.238	Papio_anubis
MGP_SPRETEiJ_G0028742	Arl6ip4	98	83.590	ENSPEMG00000008921	Arl6ip4	90	87.379	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028742	Arl6ip4	52	85.437	ENSPCIG00000003197	-	72	55.959	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	81.643	ENSPCOG00000018734	-	91	81.643	Propithecus_coquereli
MGP_SPRETEiJ_G0028742	Arl6ip4	96	85.567	ENSRNOG00000001080	Arl6ip4	90	90.909	Rattus_norvegicus
MGP_SPRETEiJ_G0028742	Arl6ip4	64	76.510	ENSRBIG00000035918	ARL6IP4	50	67.403	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028742	Arl6ip4	100	65.665	ENSRROG00000028559	-	81	72.193	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028742	Arl6ip4	86	82.178	ENSSBOG00000033244	-	91	81.517	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028742	Arl6ip4	52	84.466	ENSSHAG00000013731	-	79	63.636	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028742	Arl6ip4	51	56.364	ENSSDUG00000020259	arl6ip4	91	51.613	Seriola_dumerili
MGP_SPRETEiJ_G0028742	Arl6ip4	81	82.888	ENSSSCG00000009782	-	91	76.712	Sus_scrofa
MGP_SPRETEiJ_G0028742	Arl6ip4	85	75.510	ENSTBEG00000000080	ARL6IP4	65	71.628	Tupaia_belangeri
MGP_SPRETEiJ_G0028742	Arl6ip4	90	77.143	ENSUAMG00000000545	-	91	77.143	Ursus_americanus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	76.667	ENSUMAG00000004427	-	91	76.667	Ursus_maritimus
MGP_SPRETEiJ_G0028742	Arl6ip4	90	74.408	ENSVVUG00000028080	-	91	81.429	Vulpes_vulpes