EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028745 (Gene tree)
Gene ID: -
Gene Symbol: 2810006K23Rik
Alias: -
Full Name: RIKEN cDNA 2810006K23 gene
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 13966 bases
Position: chr5:124014319-124028284
Accession: 1919900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073550	RF-1	PF00472.20	1.2e-20	1	1
MGP_SPRETEiJ_P0073549	RF-1	PF00472.20	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073550	-	1801	-	MGP_SPRETEiJ_P0073550	184 (aa)	-	-
MGP_SPRETEiJ_T0073549	-	1637	-	MGP_SPRETEiJ_P0073549	128 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSG00000130921	C12orf65	83	82.609	Homo_sapiens
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	58.915	ENSAPOG00000000995	si:ch211-275j6.5	60	64.646	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028745	2810006K23Rik	88	52.586	ENSAMEG00000015144	C12orf65	67	73.913	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028745	2810006K23Rik	69	60.156	ENSACIG00000001644	si:ch211-275j6.5	61	66.327	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	59.690	ENSAOCG00000005589	si:ch211-275j6.5	63	65.657	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	59.690	ENSAPEG00000024618	si:ch211-275j6.5	63	64.078	Amphiprion_percula
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.519	ENSATEG00000011661	si:ch211-275j6.5	52	65.306	Anabas_testudineus
MGP_SPRETEiJ_G0028745	2810006K23Rik	63	73.913	ENSAPLG00000016073	C12orf65	73	79.545	Anas_platyrhynchos
MGP_SPRETEiJ_G0028745	2810006K23Rik	85	60.897	ENSACAG00000015561	C12orf65	56	66.364	Anolis_carolinensis
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	57.258	ENSANAG00000022881	C12orf65	70	80.870	Aotus_nancymaae
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.394	ENSACLG00000023906	si:ch211-275j6.5	69	60.360	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	54.615	ENSAMXG00000031765	si:ch211-275j6.5	67	59.633	Astyanax_mexicanus
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	75.000	ENSBTAG00000020503	C17H12orf65	67	77.391	Bos_taurus
MGP_SPRETEiJ_G0028745	2810006K23Rik	96	57.937	ENSCJAG00000016579	C12orf65	70	80.870	Callithrix_jacchus
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	71.951	ENSCAFG00020016169	C12orf65	69	74.783	Canis_lupus_dingo
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	74.847	ENSCHIG00000022229	C12orf65	65	77.391	Capra_hircus
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	76.000	ENSCAPG00000014691	C12orf65	87	78.125	Cavia_aperea
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	76.571	ENSCPOG00000007583	C12orf65	87	78.750	Cavia_porcellus
MGP_SPRETEiJ_G0028745	2810006K23Rik	80	75.676	ENSCATG00000040685	C12orf65	70	82.609	Cercocebus_atys
MGP_SPRETEiJ_G0028745	2810006K23Rik	97	74.444	ENSCLAG00000014329	C12orf65	89	76.970	Chinchilla_lanigera
MGP_SPRETEiJ_G0028745	2810006K23Rik	80	75.676	ENSCSAG00000002068	C12orf65	68	82.609	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028745	2810006K23Rik	85	57.962	ENSCPBG00000025970	C12orf65	68	63.063	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028745	2810006K23Rik	100	85.870	ENSCGRG00001013424	2810006K23Rik	100	85.870	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028745	2810006K23Rik	100	85.870	ENSCGRG00000003037	2810006K23Rik	100	85.870	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028745	2810006K23Rik	76	55.634	ENSCSEG00000014536	si:ch211-275j6.5	63	61.905	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028745	2810006K23Rik	90	51.786	ENSCVAG00000023000	si:ch211-275j6.5	59	63.107	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	68	55.200	ENSDARG00000097803	si:ch211-275j6.5	68	65.957	Danio_rerio
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	48.387	ENSDNOG00000034728	C12orf65	67	72.072	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028745	2810006K23Rik	96	70.621	ENSDORG00000026069	2810006K23Rik	100	70.621	Dipodomys_ordii
MGP_SPRETEiJ_G0028745	2810006K23Rik	66	45.455	FBgn0050100	CG30100	64	50.538	Drosophila_melanogaster
MGP_SPRETEiJ_G0028745	2810006K23Rik	71	56.383	ENSETEG00000005627	C12orf65	63	81.000	Echinops_telfairi
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	58.065	ENSEASG00005012587	C12orf65	67	81.982	Equus_asinus_asinus
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	58.065	ENSECAG00000001057	C8H12orf65	67	81.982	Equus_caballus
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	56.000	ENSEEUG00000007231	C12orf65	66	78.378	Erinaceus_europaeus
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	55.479	ENSELUG00000015178	lg13h12orf65	62	63.107	Esox_lucius
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	57.600	ENSFCAG00000015328	C12orf65	69	78.448	Felis_catus
MGP_SPRETEiJ_G0028745	2810006K23Rik	53	71.429	ENSFALG00000009261	C12orf65	66	63.393	Ficedula_albicollis
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	60.465	ENSFHEG00000017567	si:ch211-275j6.5	59	65.657	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028745	2810006K23Rik	64	63.248	ENSGMOG00000012139	si:ch211-275j6.5	62	67.391	Gadus_morhua
MGP_SPRETEiJ_G0028745	2810006K23Rik	63	67.826	ENSGALG00000029390	C15H12ORF65	71	60.345	Gallus_gallus
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	59.231	ENSGACG00000008255	si:ch211-275j6.5	63	65.000	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	94	46.825	ENSGAGG00000000823	C12orf65	76	66.667	Gopherus_agassizii
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSGGOG00000012850	C12orf65	69	82.609	Gorilla_gorilla
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.394	ENSHBUG00000007273	si:ch211-275j6.5	69	60.360	Haplochromis_burtoni
MGP_SPRETEiJ_G0028745	2810006K23Rik	98	56.250	ENSHGLG00000010966	C12orf65	62	76.522	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028745	2810006K23Rik	98	56.250	ENSHGLG00100018631	C12orf65	62	76.522	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028745	2810006K23Rik	67	65.323	ENSHCOG00000019848	si:ch211-275j6.5	55	71.277	Hippocampus_comes
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	59.375	ENSIPUG00000020793	si:ch211-275j6.5	60	63.265	Ictalurus_punctatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	91	75.449	ENSSTOG00000016463	C12orf65	66	80.870	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	96	72.316	ENSJJAG00000023360	2810006K23Rik	96	71.508	Jaculus_jaculus
MGP_SPRETEiJ_G0028745	2810006K23Rik	64	63.248	ENSKMAG00000018733	si:ch211-275j6.5	54	71.264	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028745	2810006K23Rik	66	67.769	ENSLACG00000017355	C12orf65	58	71.579	Latimeria_chalumnae
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	66.387	ENSLOCG00000005702	si:ch211-275j6.5	77	68.817	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	87	70.000	ENSLAFG00000002134	C12orf65	69	71.304	Loxodonta_africana
MGP_SPRETEiJ_G0028745	2810006K23Rik	80	75.676	ENSMMUG00000031495	C12orf65	70	82.609	Macaca_mulatta
MGP_SPRETEiJ_G0028745	2810006K23Rik	98	57.031	ENSMNEG00000044673	C12orf65	70	82.609	Macaca_nemestrina
MGP_SPRETEiJ_G0028745	2810006K23Rik	80	75.676	ENSMLEG00000044309	C12orf65	70	82.609	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	62.308	ENSMAMG00000017366	si:ch211-275j6.5	59	69.000	Mastacembelus_armatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.394	ENSMZEG00005000938	si:ch211-275j6.5	68	60.360	Maylandia_zebra
MGP_SPRETEiJ_G0028745	2810006K23Rik	88	58.182	ENSMGAG00000003354	C12orf65	71	69.072	Meleagris_gallopavo
MGP_SPRETEiJ_G0028745	2810006K23Rik	76	84.536	ENSMAUG00000010304	2810006K23Rik	99	87.200	Mesocricetus_auratus
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	57.258	ENSMICG00000037138	C12orf65	67	80.180	Microcebus_murinus
MGP_SPRETEiJ_G0028745	2810006K23Rik	99	84.699	ENSMOCG00000017477	2810006K23Rik	100	84.239	Microtus_ochrogaster
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.394	ENSMMOG00000017134	si:ch211-275j6.5	57	65.347	Mola_mola
MGP_SPRETEiJ_G0028745	2810006K23Rik	82	72.000	ENSMODG00000012450	C12orf65	64	73.874	Monodelphis_domestica
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	63.025	ENSMALG00000012291	si:ch211-275j6.5	59	68.000	Monopterus_albus
MGP_SPRETEiJ_G0028745	2810006K23Rik	100	95.135	MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	95.135	Mus_caroli
MGP_SPRETEiJ_G0028745	2810006K23Rik	100	99.457	ENSMUSG00000047635	2810006K23Rik	100	99.457	Mus_musculus
MGP_SPRETEiJ_G0028745	2810006K23Rik	83	76.471	ENSMPUG00000001679	C12orf65	63	78.182	Mustela_putorius_furo
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	70.122	ENSMLUG00000007001	C12orf65	70	73.913	Myotis_lucifugus
MGP_SPRETEiJ_G0028745	2810006K23Rik	100	72.283	ENSNGAG00000010625	2810006K23Rik	100	72.283	Nannospalax_galili
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	56.934	ENSNBRG00000008082	si:ch211-275j6.5	60	64.286	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	78.472	ENSNLEG00000001470	C12orf65	70	82.759	Nomascus_leucogenys
MGP_SPRETEiJ_G0028745	2810006K23Rik	85	69.231	ENSMEUG00000009430	C12orf65	71	73.214	Notamacropus_eugenii
MGP_SPRETEiJ_G0028745	2810006K23Rik	84	68.182	ENSOPRG00000011029	C12orf65	71	67.826	Ochotona_princeps
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	77.301	ENSODEG00000011382	-	66	80.870	Octodon_degus
MGP_SPRETEiJ_G0028745	2810006K23Rik	74	56.618	ENSONIG00000013298	si:ch211-275j6.5	56	65.957	Oreochromis_niloticus
MGP_SPRETEiJ_G0028745	2810006K23Rik	86	66.038	ENSOANG00000012866	C12orf65	64	72.973	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028745	2810006K23Rik	98	55.039	ENSOCUG00000011888	C12orf65	93	70.149	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028745	2810006K23Rik	67	58.871	ENSORLG00000006153	si:ch211-275j6.5	55	64.894	Oryzias_latipes
MGP_SPRETEiJ_G0028745	2810006K23Rik	67	58.871	ENSORLG00020017188	si:ch211-275j6.5	55	64.894	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028745	2810006K23Rik	67	58.871	ENSORLG00015005780	c9h12orf65	55	64.894	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028745	2810006K23Rik	74	55.797	ENSOMEG00000001663	si:ch211-275j6.5	64	60.185	Oryzias_melastigma
MGP_SPRETEiJ_G0028745	2810006K23Rik	94	52.033	ENSOGAG00000010778	C12orf65	71	73.913	Otolemur_garnettii
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	74.847	ENSOARG00000005214	C12orf65	68	77.391	Ovis_aries
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSPPAG00000029654	C12orf65	69	82.609	Pan_paniscus
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	73.333	ENSPPRG00000024772	C12orf65	69	77.586	Panthera_pardus
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	73.333	ENSPTIG00000011744	C12orf65	69	77.586	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSPTRG00000005595	C12H12orf65	69	82.609	Pan_troglodytes
MGP_SPRETEiJ_G0028745	2810006K23Rik	79	76.552	ENSPANG00000015388	C12orf65	70	82.609	Papio_anubis
MGP_SPRETEiJ_G0028745	2810006K23Rik	74	59.854	ENSPKIG00000001571	si:ch211-275j6.5	66	58.559	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028745	2810006K23Rik	77	63.121	ENSPSIG00000013010	C12orf65	60	65.766	Pelodiscus_sinensis
MGP_SPRETEiJ_G0028745	2810006K23Rik	84	54.194	ENSPMGG00000018342	si:ch211-275j6.5	66	61.261	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	57	55.769	ENSPMAG00000000514	si:ch211-275j6.5	70	65.385	Petromyzon_marinus
MGP_SPRETEiJ_G0028745	2810006K23Rik	85	68.153	ENSPCIG00000010996	C12orf65	66	71.053	Phascolarctos_cinereus
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	62.016	ENSPLAG00000001661	si:ch211-275j6.5	59	65.657	Poecilia_latipinna
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	62.016	ENSPMEG00000009201	si:ch211-275j6.5	59	65.657	Poecilia_mexicana
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	62.016	ENSPMEG00000018566	si:ch211-275j6.5	59	65.657	Poecilia_mexicana
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	64.706	ENSPREG00000021268	si:ch211-275j6.5	57	65.979	Poecilia_reticulata
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSPPYG00000005082	C12orf65	69	82.609	Pongo_abelii
MGP_SPRETEiJ_G0028745	2810006K23Rik	90	50.847	ENSPCAG00000016193	C12orf65	66	75.455	Procavia_capensis
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	56.452	ENSPCOG00000021574	C12orf65	62	81.081	Propithecus_coquereli
MGP_SPRETEiJ_G0028745	2810006K23Rik	90	72.289	ENSPVAG00000015301	C12orf65	69	75.652	Pteropus_vampyrus
MGP_SPRETEiJ_G0028745	2810006K23Rik	73	58.394	ENSPNYG00000014456	si:ch211-275j6.5	69	60.360	Pundamilia_nyererei
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	61.667	ENSPNAG00000019769	si:ch211-275j6.5	55	64.516	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028745	2810006K23Rik	98	91.111	ENSRNOG00000001073	RGD1563482	99	91.111	Rattus_norvegicus
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	75.694	ENSRBIG00000040789	C12orf65	69	80.870	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028745	2810006K23Rik	80	73.649	ENSRROG00000031384	C12orf65	68	80.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	58.065	ENSSBOG00000026629	C12orf65	68	82.609	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028745	2810006K23Rik	96	64.205	ENSSHAG00000014988	C12orf65	62	71.053	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028745	2810006K23Rik	76	61.806	ENSSFOG00015019122	si:ch211-275j6.5	67	61.864	Scleropages_formosus
MGP_SPRETEiJ_G0028745	2810006K23Rik	64	64.957	ENSSMAG00000016770	si:ch211-275j6.5	57	66.327	Scophthalmus_maximus
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	55.944	ENSSDUG00000020401	si:ch211-275j6.5	67	59.259	Seriola_dumerili
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	56.849	ENSSLDG00000017638	si:ch211-275j6.5	66	59.821	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028745	2810006K23Rik	72	63.158	ENSSPUG00000012613	C12orf65	60	69.388	Sphenodon_punctatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	61.345	ENSSPAG00000023476	si:ch211-275j6.5	53	67.416	Stegastes_partitus
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	58.065	ENSSSCG00000009774	C12orf65	77	78.947	Sus_scrofa
MGP_SPRETEiJ_G0028745	2810006K23Rik	65	63.333	ENSTGUG00000005440	C12orf65	71	67.033	Taeniopygia_guttata
MGP_SPRETEiJ_G0028745	2810006K23Rik	67	60.484	ENSTNIG00000015832	si:ch211-275j6.5	54	65.957	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028745	2810006K23Rik	95	54.839	ENSTBEG00000012500	C12orf65	69	78.261	Tupaia_belangeri
MGP_SPRETEiJ_G0028745	2810006K23Rik	78	77.778	ENSTTRG00000015880	C12orf65	70	80.870	Tursiops_truncatus
MGP_SPRETEiJ_G0028745	2810006K23Rik	91	55.462	ENSUAMG00000019669	C12orf65	69	75.652	Ursus_americanus
MGP_SPRETEiJ_G0028745	2810006K23Rik	91	55.462	ENSUMAG00000004025	C12orf65	69	75.652	Ursus_maritimus
MGP_SPRETEiJ_G0028745	2810006K23Rik	89	71.341	ENSVVUG00000027811	C12orf65	69	73.913	Vulpes_vulpes
MGP_SPRETEiJ_G0028745	2810006K23Rik	70	60.465	ENSXCOG00000000975	si:ch211-275j6.5	59	65.657	Xiphophorus_couchianus