EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0028753 (Gene tree)
Gene ID
-
Gene Symbol
Ddx55
Alias
2810021H22Rik
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
18362 bases
Position
chr5:124245588-124263949
Accession
1915098
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0073593ResIIIPF04851.155.6e-0711
MGP_SPRETEiJ_P0073591ResIIIPF04851.159.9e-0711
MGP_SPRETEiJ_P0073591DEADPF00270.291.1e-4111
MGP_SPRETEiJ_P0073593DEADPF00270.291.2e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0073591-2813-MGP_SPRETEiJ_P0073591600 (aa)--
MGP_SPRETEiJ_T0073593-1857-MGP_SPRETEiJ_P0073593618 (aa)--
MGP_SPRETEiJ_T0073592-3505-MGP_SPRETEiJ_P0073592135 (aa)--
MGP_SPRETEiJ_T0073595-477--- (aa)--
MGP_SPRETEiJ_T0073594-445--- (aa)--
MGP_SPRETEiJ_T0073597-824--- (aa)--
MGP_SPRETEiJ_T0073596-1427--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0028753's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028753's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0028753Ddx555831.429MGP_SPRETEiJ_G0015463Ddx595431.429
MGP_SPRETEiJ_G0028753Ddx555932.687MGP_SPRETEiJ_G0020915Ddx175332.687
MGP_SPRETEiJ_G0028753Ddx558036.025MGP_SPRETEiJ_G0015336Ddx186936.025
MGP_SPRETEiJ_G0028753Ddx555832.682MGP_SPRETEiJ_G0032257Ddx497032.682
MGP_SPRETEiJ_G0028753Ddx555835.977MGP_SPRETEiJ_G0030034Ddx478135.977
MGP_SPRETEiJ_G0028753Ddx555930.137MGP_SPRETEiJ_G0018173Ddx55630.137
MGP_SPRETEiJ_G0028753Ddx555935.359MGP_SPRETEiJ_G0019448Ddx415535.165
MGP_SPRETEiJ_G0028753Ddx555931.768MGP_SPRETEiJ_G0033607Ddx435331.768
MGP_SPRETEiJ_G0028753Ddx557538.411MGP_SPRETEiJ_G0033352Ddx105038.411
MGP_SPRETEiJ_G0028753Ddx556330.457MGP_SPRETEiJ_G0017733Ddx526230.457
MGP_SPRETEiJ_G0028753Ddx557530.620MGP_SPRETEiJ_G0024277Ddx317430.620
MGP_SPRETEiJ_G0028753Ddx555935.467MGP_SPRETEiJ_G0015828D1Pas15435.467
MGP_SPRETEiJ_G0028753Ddx555930.362MGP_SPRETEiJ_G0021508Eif4a29330.362
MGP_SPRETEiJ_G0028753Ddx556030.886MGP_SPRETEiJ_G0032628Ddx286930.280
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0028753Ddx559991.152ENSG00000111364DDX559694.536Homo_sapiens
MGP_SPRETEiJ_G0028753Ddx559873.649ENSAPOG00000013126ddx559973.649Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028753Ddx559988.648ENSAMEG00000015274DDX559988.648Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028753Ddx559774.144ENSACIG00000007580ddx559974.144Amphilophus_citrinellus
MGP_SPRETEiJ_G0028753Ddx559773.846ENSAOCG00000012037ddx559273.846Amphiprion_ocellaris
MGP_SPRETEiJ_G0028753Ddx559774.017ENSAPEG00000011003ddx559274.017Amphiprion_percula
MGP_SPRETEiJ_G0028753Ddx559971.452ENSATEG00000004029ddx559971.452Anabas_testudineus
MGP_SPRETEiJ_G0028753Ddx559477.425ENSAPLG00000015032DDX559977.208Anas_platyrhynchos
MGP_SPRETEiJ_G0028753Ddx559783.248ENSACAG00000015296DDX559883.248Anolis_carolinensis
MGP_SPRETEiJ_G0028753Ddx559387.535ENSANAG00000034064DDX5510087.535Aotus_nancymaae
MGP_SPRETEiJ_G0028753Ddx559773.630ENSACLG00000024691ddx559973.630Astatotilapia_calliptera
MGP_SPRETEiJ_G0028753Ddx559670.312ENSAMXG00000019947ddx559570.312Astyanax_mexicanus
MGP_SPRETEiJ_G0028753Ddx559989.333ENSBTAG00000007266DDX559984.500Bos_taurus
MGP_SPRETEiJ_G0028753Ddx559537.037WBGene00013983ZK512.29936.395Caenorhabditis_elegans
MGP_SPRETEiJ_G0028753Ddx5510089.833ENSCJAG00000020471-10089.833Callithrix_jacchus
MGP_SPRETEiJ_G0028753Ddx556186.905ENSCJAG00000045019-9983.495Callithrix_jacchus
MGP_SPRETEiJ_G0028753Ddx559988.314ENSCAFG00000007452DDX559988.314Canis_familiaris
MGP_SPRETEiJ_G0028753Ddx559089.114ENSCAFG00020015254DDX559489.655Canis_lupus_dingo
MGP_SPRETEiJ_G0028753Ddx559989.500ENSCHIG00000020402DDX559989.500Capra_hircus
MGP_SPRETEiJ_G0028753Ddx559990.818ENSTSYG00000007427DDX559990.818Carlito_syrichta
MGP_SPRETEiJ_G0028753Ddx559786.379ENSCAPG00000005124DDX559887.170Cavia_aperea
MGP_SPRETEiJ_G0028753Ddx559987.646ENSCPOG00000010015DDX559987.646Cavia_porcellus
MGP_SPRETEiJ_G0028753Ddx5510090.000ENSCCAG00000021652DDX5510090.000Cebus_capucinus
MGP_SPRETEiJ_G0028753Ddx559986.349ENSCATG00000034315DDX559986.349Cercocebus_atys
MGP_SPRETEiJ_G0028753Ddx559988.796ENSCLAG00000011203DDX559988.796Chinchilla_lanigera
MGP_SPRETEiJ_G0028753Ddx559990.651ENSCSAG00000002057DDX559990.651Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028753Ddx555792.857ENSCHOG00000006189-6092.857Choloepus_hoffmanni
MGP_SPRETEiJ_G0028753Ddx558787.165ENSCPBG00000025960DDX559687.165Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028753Ddx559653.976ENSCING00000009622-9853.469Ciona_intestinalis
MGP_SPRETEiJ_G0028753Ddx559552.487ENSCSAVG00000003375-9752.677Ciona_savignyi
MGP_SPRETEiJ_G0028753Ddx559991.152ENSCANG00000000156DDX559991.152Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028753Ddx5510095.333ENSCGRG00001001652Ddx5510095.333Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028753Ddx5510095.167ENSCGRG00000014742Ddx5510095.167Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028753Ddx559872.184ENSCSEG00000012161ddx559872.184Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028753Ddx559773.504ENSCVAG00000006635ddx559973.504Cyprinodon_variegatus
MGP_SPRETEiJ_G0028753Ddx559775.342ENSDARG00000009864ddx559875.342Danio_rerio
MGP_SPRETEiJ_G0028753Ddx559990.167ENSDNOG00000005167DDX559990.167Dasypus_novemcinctus
MGP_SPRETEiJ_G0028753Ddx559547.300FBgn0037561CG96309847.855Drosophila_melanogaster
MGP_SPRETEiJ_G0028753Ddx559474.600ENSETEG00000001826DDX559974.600Echinops_telfairi
MGP_SPRETEiJ_G0028753Ddx559565.812ENSEBUG00000007071ddx559865.756Eptatretus_burgeri
MGP_SPRETEiJ_G0028753Ddx559990.468ENSEASG00005012650DDX559990.468Equus_asinus_asinus
MGP_SPRETEiJ_G0028753Ddx558791.954ENSECAG00000011237DDX558591.825Equus_caballus
MGP_SPRETEiJ_G0028753Ddx5510078.333ENSEEUG00000006313DDX5510078.333Erinaceus_europaeus
MGP_SPRETEiJ_G0028753Ddx559772.355ENSELUG00000002616ddx559772.355Esox_lucius
MGP_SPRETEiJ_G0028753Ddx559988.982ENSFCAG00000003770DDX559988.982Felis_catus
MGP_SPRETEiJ_G0028753Ddx5510082.333ENSFALG00000009300DDX5510082.333Ficedula_albicollis
MGP_SPRETEiJ_G0028753Ddx559988.127ENSFDAG00000004680DDX559988.127Fukomys_damarensis
MGP_SPRETEiJ_G0028753Ddx559772.774ENSFHEG00000007912ddx559972.774Fundulus_heteroclitus
MGP_SPRETEiJ_G0028753Ddx559669.257ENSGMOG00000017762ddx559669.430Gadus_morhua
MGP_SPRETEiJ_G0028753Ddx559783.993ENSGALG00000003298DDX559983.562Gallus_gallus
MGP_SPRETEiJ_G0028753Ddx559773.024ENSGAFG00000004388ddx559973.024Gambusia_affinis
MGP_SPRETEiJ_G0028753Ddx559872.619ENSGACG00000015591ddx559671.933Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028753Ddx559085.793ENSGAGG00000014403DDX559686.398Gopherus_agassizii
MGP_SPRETEiJ_G0028753Ddx559991.152ENSGGOG00000026102DDX559991.152Gorilla_gorilla
MGP_SPRETEiJ_G0028753Ddx559773.630ENSHBUG00000011523ddx559973.630Haplochromis_burtoni
MGP_SPRETEiJ_G0028753Ddx559988.294ENSHGLG00000019202DDX559988.294Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028753Ddx559988.294ENSHGLG00100019440DDX559988.294Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028753Ddx559765.068ENSHCOG00000004710ddx559965.068Hippocampus_comes
MGP_SPRETEiJ_G0028753Ddx559773.322ENSIPUG00000014551ddx559673.322Ictalurus_punctatus
MGP_SPRETEiJ_G0028753Ddx559989.649ENSSTOG00000006121DDX559989.649Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028753Ddx559990.818ENSJJAG00000013401Ddx559990.818Jaculus_jaculus
MGP_SPRETEiJ_G0028753Ddx559773.413ENSKMAG00000022006ddx559973.413Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028753Ddx559971.500ENSLBEG00000021815ddx559971.500Labrus_bergylta
MGP_SPRETEiJ_G0028753Ddx559780.345ENSLACG00000017050DDX559780.345Latimeria_chalumnae
MGP_SPRETEiJ_G0028753Ddx5510074.167ENSLOCG00000005828ddx559974.167Lepisosteus_oculatus
MGP_SPRETEiJ_G0028753Ddx559991.319ENSLAFG00000007293DDX5510091.319Loxodonta_africana
MGP_SPRETEiJ_G0028753Ddx559990.985ENSMFAG00000038165DDX559990.985Macaca_fascicularis
MGP_SPRETEiJ_G0028753Ddx559991.319ENSMMUG00000013178DDX559991.319Macaca_mulatta
MGP_SPRETEiJ_G0028753Ddx559990.985ENSMNEG00000028630DDX559990.985Macaca_nemestrina
MGP_SPRETEiJ_G0028753Ddx5510091.167ENSMLEG00000039187DDX5510091.167Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028753Ddx559675.347ENSMAMG00000011297ddx559675.087Mastacembelus_armatus
MGP_SPRETEiJ_G0028753Ddx559773.630ENSMZEG00005008047ddx559973.630Maylandia_zebra
MGP_SPRETEiJ_G0028753Ddx559979.097ENSMGAG00000003185DDX559880.207Meleagris_gallopavo
MGP_SPRETEiJ_G0028753Ddx5510096.167ENSMAUG00000020054Ddx5510096.167Mesocricetus_auratus
MGP_SPRETEiJ_G0028753Ddx5510083.195ENSMICG00000006477DDX5510083.195Microcebus_murinus
MGP_SPRETEiJ_G0028753Ddx5510095.833ENSMOCG00000021289Ddx5510095.833Microtus_ochrogaster
MGP_SPRETEiJ_G0028753Ddx559773.288ENSMMOG00000009411ddx559773.288Mola_mola
MGP_SPRETEiJ_G0028753Ddx559487.411ENSMODG00000012519DDX559787.411Monodelphis_domestica
MGP_SPRETEiJ_G0028753Ddx559968.447ENSMALG00000018543ddx559968.447Monopterus_albus
MGP_SPRETEiJ_G0028753Ddx5510096.296MGP_CAROLIEiJ_G0027755-9999.326Mus_caroli
MGP_SPRETEiJ_G0028753Ddx5510099.500ENSMUSG00000029389Ddx5510099.500Mus_musculus
MGP_SPRETEiJ_G0028753Ddx5510094.000MGP_PahariEiJ_G0024335Ddx5510094.000Mus_pahari
MGP_SPRETEiJ_G0028753Ddx559984.500ENSMPUG00000001505DDX559984.500Mustela_putorius_furo
MGP_SPRETEiJ_G0028753Ddx5510079.500ENSMLUG00000001265-10078.667Myotis_lucifugus
MGP_SPRETEiJ_G0028753Ddx558776.571ENSMLUG00000025148-9676.571Myotis_lucifugus
MGP_SPRETEiJ_G0028753Ddx559992.821ENSNGAG00000020564Ddx559992.821Nannospalax_galili
MGP_SPRETEiJ_G0028753Ddx559773.630ENSNBRG00000018748ddx559973.630Neolamprologus_brichardi
MGP_SPRETEiJ_G0028753Ddx559991.486ENSNLEG00000001658DDX5510091.486Nomascus_leucogenys
MGP_SPRETEiJ_G0028753Ddx559982.972ENSMEUG00000013689DDX559982.972Notamacropus_eugenii
MGP_SPRETEiJ_G0028753Ddx5510087.167ENSOPRG00000000850DDX5510087.167Ochotona_princeps
MGP_SPRETEiJ_G0028753Ddx559986.555ENSODEG00000009632-9986.949Octodon_degus
MGP_SPRETEiJ_G0028753Ddx559372.679ENSODEG00000016592-10073.393Octodon_degus
MGP_SPRETEiJ_G0028753Ddx559773.288ENSONIG00000015311ddx559673.288Oreochromis_niloticus
MGP_SPRETEiJ_G0028753Ddx559388.014ENSOANG00000015332DDX559988.014Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028753Ddx559988.629ENSOCUG00000003456DDX559988.629Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028753Ddx559772.774ENSORLG00000029482ddx559872.774Oryzias_latipes
MGP_SPRETEiJ_G0028753Ddx559772.603ENSORLG00015004885ddx559872.603Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028753Ddx559874.061ENSOMEG00000023619ddx559974.061Oryzias_melastigma
MGP_SPRETEiJ_G0028753Ddx5510088.833ENSOGAG00000009195DDX5510088.870Otolemur_garnettii
MGP_SPRETEiJ_G0028753Ddx559989.833ENSOARG00000003364DDX559989.833Ovis_aries
MGP_SPRETEiJ_G0028753Ddx559990.985ENSPPAG00000005988DDX559990.985Pan_paniscus
MGP_SPRETEiJ_G0028753Ddx559989.316ENSPPRG00000012157DDX559989.316Panthera_pardus
MGP_SPRETEiJ_G0028753Ddx559489.520ENSPTIG00000011490DDX559489.520Panthera_tigris_altaica
MGP_SPRETEiJ_G0028753Ddx559990.818ENSPTRG00000005601DDX559990.818Pan_troglodytes
MGP_SPRETEiJ_G0028753Ddx559991.319ENSPANG00000007905DDX559991.319Papio_anubis
MGP_SPRETEiJ_G0028753Ddx559874.320ENSPKIG00000023661ddx5510074.320Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028753Ddx559383.066ENSPSIG00000012901DDX559983.547Pelodiscus_sinensis
MGP_SPRETEiJ_G0028753Ddx559071.771ENSPMGG00000017224ddx559671.839Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028753Ddx5510095.333ENSPEMG00000018052Ddx5510095.333Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028753Ddx558566.085ENSPMAG00000007486ddx559965.830Petromyzon_marinus
MGP_SPRETEiJ_G0028753Ddx558789.464ENSPCIG00000010973DDX559489.464Phascolarctos_cinereus
MGP_SPRETEiJ_G0028753Ddx559773.116ENSPFOG00000006970ddx559173.116Poecilia_formosa
MGP_SPRETEiJ_G0028753Ddx559773.024ENSPLAG00000014735ddx559973.024Poecilia_latipinna
MGP_SPRETEiJ_G0028753Ddx559773.196ENSPMEG00000020635ddx559973.196Poecilia_mexicana
MGP_SPRETEiJ_G0028753Ddx559772.461ENSPREG00000016644ddx559972.461Poecilia_reticulata
MGP_SPRETEiJ_G0028753Ddx559989.482ENSPPYG00000005091DDX559988.982Pongo_abelii
MGP_SPRETEiJ_G0028753Ddx559988.815ENSPCAG00000014127DDX559988.815Procavia_capensis
MGP_SPRETEiJ_G0028753Ddx5510090.500ENSPCOG00000011189DDX5510090.500Propithecus_coquereli
MGP_SPRETEiJ_G0028753Ddx559987.793ENSPVAG00000015321DDX559987.793Pteropus_vampyrus
MGP_SPRETEiJ_G0028753Ddx559773.459ENSPNYG00000003669ddx559973.459Pundamilia_nyererei
MGP_SPRETEiJ_G0028753Ddx559675.606ENSPNAG00000012855ddx559675.606Pygocentrus_nattereri
MGP_SPRETEiJ_G0028753Ddx5510097.000ENSRNOG00000001043Ddx5510097.000Rattus_norvegicus
MGP_SPRETEiJ_G0028753Ddx559990.818ENSRBIG00000044699DDX559990.818Rhinopithecus_bieti
MGP_SPRETEiJ_G0028753Ddx559991.152ENSRROG00000024824DDX559991.152Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028753Ddx558939.580YFL002C-8839.855Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028753Ddx5510090.167ENSSBOG00000024833DDX5510090.167Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028753Ddx559487.611ENSSHAG00000015820DDX559987.611Sarcophilus_harrisii
MGP_SPRETEiJ_G0028753Ddx559676.684ENSSFOG00015017496ddx559576.684Scleropages_formosus
MGP_SPRETEiJ_G0028753Ddx559773.083ENSSMAG00000010441ddx559773.083Scophthalmus_maximus
MGP_SPRETEiJ_G0028753Ddx559972.213ENSSDUG00000023568ddx559972.213Seriola_dumerili
MGP_SPRETEiJ_G0028753Ddx559768.376ENSSLDG00000011299ddx559668.376Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028753Ddx559384.286ENSSARG00000003842DDX5510084.643Sorex_araneus
MGP_SPRETEiJ_G0028753Ddx559883.419ENSSPUG00000012798DDX559883.419Sphenodon_punctatus
MGP_SPRETEiJ_G0028753Ddx559773.459ENSSPAG00000011806ddx559773.459Stegastes_partitus
MGP_SPRETEiJ_G0028753Ddx558791.762ENSSSCG00000009771DDX559491.762Sus_scrofa
MGP_SPRETEiJ_G0028753Ddx559782.556ENSTGUG00000005302-9981.695Taeniopygia_guttata
MGP_SPRETEiJ_G0028753Ddx559771.747ENSTRUG00000018525ddx559771.747Takifugu_rubripes
MGP_SPRETEiJ_G0028753Ddx5510069.934ENSTNIG00000013515DDX5510069.934Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028753Ddx557483.108ENSTBEG00000010822DDX5510083.108Tupaia_belangeri
MGP_SPRETEiJ_G0028753Ddx559989.816ENSTTRG00000007251DDX559989.816Tursiops_truncatus
MGP_SPRETEiJ_G0028753Ddx559988.147ENSUAMG00000012589DDX559988.147Ursus_americanus
MGP_SPRETEiJ_G0028753Ddx559388.309ENSUMAG00000003869DDX559988.309Ursus_maritimus
MGP_SPRETEiJ_G0028753Ddx559384.173ENSVPAG00000007028DDX559984.173Vicugna_pacos
MGP_SPRETEiJ_G0028753Ddx559889.060ENSVVUG00000027506DDX559889.310Vulpes_vulpes
MGP_SPRETEiJ_G0028753Ddx559878.462ENSXETG00000005825ddx559878.462Xenopus_tropicalis
MGP_SPRETEiJ_G0028753Ddx559773.368ENSXCOG00000010120ddx559973.368Xiphophorus_couchianus
MGP_SPRETEiJ_G0028753Ddx559773.540ENSXMAG00000011731ddx559973.540Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us