EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028777 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 3670 bases
Position: chr5:128874665-128878334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073720	MMR_HSR1	PF01926.23	0.0002	1	1
MGP_SPRETEiJ_P0073722	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073722	-	2051	-	MGP_SPRETEiJ_P0073722	185 (aa)	-	-
MGP_SPRETEiJ_T0073720	-	2006	-	MGP_SPRETEiJ_P0073720	185 (aa)	-	-
MGP_SPRETEiJ_T0073721	-	229	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028777	-	85	31.677	MGP_SPRETEiJ_G0026744	Rab2a	76	31.677
MGP_SPRETEiJ_G0028777	-	82	33.766	MGP_SPRETEiJ_G0033485	Rab11a	77	37.288
MGP_SPRETEiJ_G0028777	-	85	32.919	MGP_SPRETEiJ_G0023450	Rab1b	80	32.919
MGP_SPRETEiJ_G0028777	-	88	32.544	MGP_SPRETEiJ_G0029636	Rab7	82	32.544
MGP_SPRETEiJ_G0028777	-	96	89.266	MGP_SPRETEiJ_G0030206	Rasl2-9	82	89.266
MGP_SPRETEiJ_G0028777	-	85	30.435	MGP_SPRETEiJ_G0020130	Rab2b	79	31.579
MGP_SPRETEiJ_G0028777	-	89	33.333	MGP_SPRETEiJ_G0016774	Rab5b	80	33.333
MGP_SPRETEiJ_G0028777	-	88	34.940	MGP_SPRETEiJ_G0031102	Rab30	82	34.940
MGP_SPRETEiJ_G0028777	-	82	33.117	MGP_SPRETEiJ_G0026114	Rab25	72	33.117
MGP_SPRETEiJ_G0028777	-	85	30.435	MGP_SPRETEiJ_G0018231	Rab37	75	30.435
MGP_SPRETEiJ_G0028777	-	86	30.864	MGP_SPRETEiJ_G0014820	Rab23	68	30.864
MGP_SPRETEiJ_G0028777	-	90	33.728	MGP_SPRETEiJ_G0018027	Rab5c	78	33.728
MGP_SPRETEiJ_G0028777	-	90	30.769	MGP_SPRETEiJ_G0031162	Rab6a	81	30.769
MGP_SPRETEiJ_G0028777	-	83	32.500	MGP_SPRETEiJ_G0016248	Rab36	60	32.500
MGP_SPRETEiJ_G0028777	-	94	30.556	MGP_SPRETEiJ_G0024394	Rab14	84	30.556
MGP_SPRETEiJ_G0028777	-	81	32.000	MGP_SPRETEiJ_G0021073	Rabl2	67	32.000
MGP_SPRETEiJ_G0028777	-	86	30.247	MGP_SPRETEiJ_G0022741	Rab31	83	30.247
MGP_SPRETEiJ_G0028777	-	57	33.333	MGP_SPRETEiJ_G0033706	Mras	81	31.765
MGP_SPRETEiJ_G0028777	-	85	31.928	MGP_SPRETEiJ_G0034202	Rab33a	70	31.928
MGP_SPRETEiJ_G0028777	-	86	31.737	MGP_SPRETEiJ_G0034594	Rab9b	83	31.737
MGP_SPRETEiJ_G0028777	-	82	34.416	MGP_SPRETEiJ_G0022327	Rab11b	85	34.416
MGP_SPRETEiJ_G0028777	-	85	32.298	MGP_SPRETEiJ_G0016958	Rab1a	80	32.298
MGP_SPRETEiJ_G0028777	-	82	33.987	MGP_SPRETEiJ_G0028630	Rab35	88	31.250
MGP_SPRETEiJ_G0028777	-	86	33.333	MGP_SPRETEiJ_G0022894	Rab18	79	33.333
MGP_SPRETEiJ_G0028777	-	86	30.247	MGP_SPRETEiJ_G0025672	Rab22a	84	30.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028777	-	96	96.610	ENSG00000132341	RAN	87	94.350	Homo_sapiens
MGP_SPRETEiJ_G0028777	-	96	90.395	ENSBTAG00000024233	-	82	90.395	Bos_taurus
MGP_SPRETEiJ_G0028777	-	96	89.266	ENSCAFG00020003142	-	82	89.266	Canis_lupus_dingo
MGP_SPRETEiJ_G0028777	-	96	84.181	ENSCHIG00000025632	-	80	84.181	Capra_hircus
MGP_SPRETEiJ_G0028777	-	82	96.689	ENSCSAG00000001906	-	99	96.689	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028777	-	81	92.000	ENSCING00000003944	-	100	86.957	Ciona_intestinalis
MGP_SPRETEiJ_G0028777	-	96	96.045	ENSCANG00000004264	-	82	96.045	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028777	-	96	93.785	ENSCGRG00001009212	-	82	93.785	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028777	-	96	93.785	ENSCGRG00000019639	Rasl2-9	82	93.785	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028777	-	95	86.857	ENSCGRG00000007401	-	80	86.857	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028777	-	96	88.701	ENSDNOG00000031679	-	80	88.701	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028777	-	59	90.000	ENSETEG00000010467	-	100	90.000	Echinops_telfairi
MGP_SPRETEiJ_G0028777	-	96	88.701	ENSHCOG00000009757	ran	82	88.701	Hippocampus_comes
MGP_SPRETEiJ_G0028777	-	77	96.479	ENSLACG00000018793	RAN	97	96.479	Latimeria_chalumnae
MGP_SPRETEiJ_G0028777	-	96	93.220	ENSMAUG00000015974	-	82	93.220	Mesocricetus_auratus
MGP_SPRETEiJ_G0028777	-	96	90.957	ENSMICG00000000653	-	83	90.957	Microcebus_murinus
MGP_SPRETEiJ_G0028777	-	96	89.831	ENSMUSG00000083649	Rasl2-9	82	89.831	Mus_musculus
MGP_SPRETEiJ_G0028777	-	91	94.643	ENSNGAG00000016204	-	92	94.643	Nannospalax_galili
MGP_SPRETEiJ_G0028777	-	89	92.121	ENSPMGG00000008616	ran	81	92.121	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028777	-	96	94.350	ENSPEMG00000010658	-	83	94.350	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028777	-	81	97.987	ENSRBIG00000037389	-	75	97.987	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028777	-	96	96.045	ENSRROG00000044174	-	89	96.045	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028777	-	95	91.477	ENSTRUG00000013749	ran	82	91.477	Takifugu_rubripes
MGP_SPRETEiJ_G0028777	-	95	91.477	ENSTNIG00000013137	ran	81	91.477	Tetraodon_nigroviridis