EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0028798 (Gene tree)
Gene ID
-
Gene Symbol
Sbds
Alias
4733401P19Rik|Shwachman-Bodian-Diamond syndrome homolog (human)
Full Name
SBDS ribosome maturation factor
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
7857 bases
Position
chr5:130157539-130165395
Accession
1913961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0073832SBDSPF01172.186.1e-3311
MGP_SPRETEiJ_P0073834SBDSPF01172.181.5e-1811
MGP_SPRETEiJ_P0073832SBDS_CPF09377.105.1e-3911
MGP_SPRETEiJ_P0073834SBDS_CPF09377.109.6e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0073832-1545-MGP_SPRETEiJ_P0073832250 (aa)-UPI00000225CF
MGP_SPRETEiJ_T0073833-825-MGP_SPRETEiJ_P007383343 (aa)-UPI00016118B4
MGP_SPRETEiJ_T0073836-360--- (aa)--
MGP_SPRETEiJ_T0073834-916-MGP_SPRETEiJ_P0073834173 (aa)--
MGP_SPRETEiJ_T0073835-435--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0028798's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028798's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0028798Sbds10097.674ENSG00000126524SBDS10097.200Homo_sapiens
MGP_SPRETEiJ_G0028798Sbds9892.857ENSAPOG00000014285sbds10084.739Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSAMEG00000018167SBDS10096.800Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0028798Sbds9892.857ENSACIG00000007308sbds10084.524Amphilophus_citrinellus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSAOCG00000016770sbds10084.739Amphiprion_ocellaris
MGP_SPRETEiJ_G0028798Sbds9892.857ENSAPEG00000015897sbds10085.141Amphiprion_percula
MGP_SPRETEiJ_G0028798Sbds9890.476ENSATEG00000006901sbds10084.337Anabas_testudineus
MGP_SPRETEiJ_G0028798Sbds9696.988ENSANAG00000037501-10096.618Aotus_nancymaae
MGP_SPRETEiJ_G0028798Sbds9593.293ENSANAG00000024342-9790.043Aotus_nancymaae
MGP_SPRETEiJ_G0028798Sbds9892.857ENSACLG00000018750sbds10085.944Astatotilapia_calliptera
MGP_SPRETEiJ_G0028798Sbds9890.476ENSAMXG00000005361sbds10085.200Astyanax_mexicanus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSBTAG00000004051SBDS10097.600Bos_taurus
MGP_SPRETEiJ_G0028798Sbds9380.000WBGene00021063sbds-19758.130Caenorhabditis_elegans
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCJAG00000041007SBDS10096.800Callithrix_jacchus
MGP_SPRETEiJ_G0028798Sbds10094.048ENSCAFG00000010797SBDS10094.048Canis_familiaris
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCAFG00020005357SBDS10096.400Canis_lupus_dingo
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCHIG00000026854SBDS10097.600Capra_hircus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSTSYG00000033822SBDS10097.200Carlito_syrichta
MGP_SPRETEiJ_G0028798Sbds7197.561ENSCAPG00000006634SBDS10097.561Cavia_aperea
MGP_SPRETEiJ_G0028798Sbds10098.000ENSCPOG00000036143SBDS10098.000Cavia_porcellus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCCAG00000020671SBDS10096.800Cebus_capucinus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCATG00000039026SBDS10097.200Cercocebus_atys
MGP_SPRETEiJ_G0028798Sbds9578.049ENSCLAG00000002113-9970.968Chinchilla_lanigera
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCLAG00000005721-10097.600Chinchilla_lanigera
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCSAG00000018275SBDS10097.200Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCHOG00000003795SBDS10092.800Choloepus_hoffmanni
MGP_SPRETEiJ_G0028798Sbds10088.800ENSCPBG00000014893SBDS10088.800Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028798Sbds9880.952ENSCSAVG00000011811-10066.800Ciona_savignyi
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCANG00000032368SBDS10096.800Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028798Sbds7198.374ENSCGRG00001019886Sbds10097.561Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028798Sbds10097.674ENSCGRG00001000088-8298.795Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028798Sbds10098.266ENSCGRG00000009211Sbds10098.068Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0028798Sbds9892.857ENSCSEG00000005798sbds10083.133Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028798Sbds9895.238ENSCVAG00000001053sbds10083.534Cyprinodon_variegatus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSDARG00000027803sbds10084.400Danio_rerio
MGP_SPRETEiJ_G0028798Sbds10097.674ENSDNOG00000041174SBDS10096.800Dasypus_novemcinctus
MGP_SPRETEiJ_G0028798Sbds10098.000ENSDORG00000026218Sbds10098.000Dipodomys_ordii
MGP_SPRETEiJ_G0028798Sbds9187.179FBgn0035714CG85499959.438Drosophila_melanogaster
MGP_SPRETEiJ_G0028798Sbds9764.072ENSEBUG00000015780sbds10059.657Eptatretus_burgeri
MGP_SPRETEiJ_G0028798Sbds10097.674ENSEASG00005008821SBDS10097.600Equus_asinus_asinus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSECAG00000008202SBDS10097.600Equus_caballus
MGP_SPRETEiJ_G0028798Sbds10095.349ENSEEUG00000004768SBDS10074.519Erinaceus_europaeus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSELUG00000008382sbds10082.400Esox_lucius
MGP_SPRETEiJ_G0028798Sbds10097.674ENSFCAG00000022142SBDS10097.200Felis_catus
MGP_SPRETEiJ_G0028798Sbds10088.800ENSFALG00000013808SBDS10088.800Ficedula_albicollis
MGP_SPRETEiJ_G0028798Sbds10098.000ENSFDAG00000018947-10098.000Fukomys_damarensis
MGP_SPRETEiJ_G0028798Sbds9890.476ENSFHEG00000000708sbds10080.321Fundulus_heteroclitus
MGP_SPRETEiJ_G0028798Sbds9895.238ENSGMOG00000018356sbds9984.800Gadus_morhua
MGP_SPRETEiJ_G0028798Sbds10088.400ENSGALG00000027989SBDS10088.400Gallus_gallus
MGP_SPRETEiJ_G0028798Sbds9280.435ENSGAFG00000014204sbds10080.435Gambusia_affinis
MGP_SPRETEiJ_G0028798Sbds9892.857ENSGACG00000012697sbds10083.936Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028798Sbds9689.157ENSGAGG00000022402SBDS10089.252Gopherus_agassizii
MGP_SPRETEiJ_G0028798Sbds10097.674ENSGGOG00000001472-8797.701Gorilla_gorilla
MGP_SPRETEiJ_G0028798Sbds7997.059ENSGGOG00000040023-9276.763Gorilla_gorilla
MGP_SPRETEiJ_G0028798Sbds9892.857ENSHBUG00000002660sbds10085.944Haplochromis_burtoni
MGP_SPRETEiJ_G0028798Sbds10097.674ENSHGLG00000009671SBDS10096.400Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028798Sbds10097.674ENSHGLG00100011332SBDS10096.400Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028798Sbds9890.476ENSHCOG00000018606sbds10081.526Hippocampus_comes
MGP_SPRETEiJ_G0028798Sbds9895.238ENSIPUG00000006536sbds10086.000Ictalurus_punctatus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSSTOG00000022203-9097.647Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028798Sbds10072.093ENSJJAG00000013791-10087.619Jaculus_jaculus
MGP_SPRETEiJ_G0028798Sbds8697.297ENSJJAG00000003934-10069.565Jaculus_jaculus
MGP_SPRETEiJ_G0028798Sbds10094.000ENSJJAG00000012033-10094.000Jaculus_jaculus
MGP_SPRETEiJ_G0028798Sbds9890.476ENSKMAG00000018542sbds10084.337Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028798Sbds9890.476ENSLBEG00000016687sbds10082.731Labrus_bergylta
MGP_SPRETEiJ_G0028798Sbds9890.476ENSLACG00000018916SBDS10070.472Latimeria_chalumnae
MGP_SPRETEiJ_G0028798Sbds9892.857ENSLOCG00000004073sbds10087.200Lepisosteus_oculatus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSLAFG00000008763SBDS10095.600Loxodonta_africana
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMFAG00000032620SBDS10097.200Macaca_fascicularis
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMMUG00000045653SBDS10097.200Macaca_mulatta
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMNEG00000031523SBDS10097.200Macaca_nemestrina
MGP_SPRETEiJ_G0028798Sbds9197.436ENSMLEG00000036826SBDS10074.016Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSMAMG00000016062sbds10084.739Mastacembelus_armatus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSMZEG00005024385sbds10085.944Maylandia_zebra
MGP_SPRETEiJ_G0028798Sbds10088.400ENSMGAG00000002119SBDS10088.400Meleagris_gallopavo
MGP_SPRETEiJ_G0028798Sbds10093.023ENSMAUG00000022214-10077.510Mesocricetus_auratus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMAUG00000004862-9185.437Mesocricetus_auratus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMICG00000014366SBDS10097.600Microcebus_murinus
MGP_SPRETEiJ_G0028798Sbds10098.800ENSMOCG00000011739Sbds10098.800Microtus_ochrogaster
MGP_SPRETEiJ_G0028798Sbds9892.857ENSMMOG00000005061sbds10074.400Mola_mola
MGP_SPRETEiJ_G0028798Sbds10097.674ENSMODG00000006644SBDS10095.600Monodelphis_domestica
MGP_SPRETEiJ_G0028798Sbds9892.857ENSMALG00000010219sbds10084.739Monopterus_albus
MGP_SPRETEiJ_G0028798Sbds100100.000MGP_CAROLIEiJ_G0027800Sbds100100.000Mus_caroli
MGP_SPRETEiJ_G0028798Sbds100100.000ENSMUSG00000025337Sbds100100.000Mus_musculus
MGP_SPRETEiJ_G0028798Sbds100100.000MGP_PahariEiJ_G0024384Sbds100100.000Mus_pahari
MGP_SPRETEiJ_G0028798Sbds7393.701ENSMPUG00000016192SBDS9794.048Mustela_putorius_furo
MGP_SPRETEiJ_G0028798Sbds8295.745ENSMLUG00000013575SBDS10094.505Myotis_lucifugus
MGP_SPRETEiJ_G0028798Sbds10098.800ENSNGAG00000012093Sbds10098.800Nannospalax_galili
MGP_SPRETEiJ_G0028798Sbds9892.857ENSNBRG00000017027sbds10085.944Neolamprologus_brichardi
MGP_SPRETEiJ_G0028798Sbds10097.674ENSNLEG00000013288SBDS10097.200Nomascus_leucogenys
MGP_SPRETEiJ_G0028798Sbds10096.400ENSOPRG00000008721SBDS10096.400Ochotona_princeps
MGP_SPRETEiJ_G0028798Sbds10081.395ENSODEG00000001116-9976.707Octodon_degus
MGP_SPRETEiJ_G0028798Sbds9972.691ENSODEG00000000137-8576.000Octodon_degus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSODEG00000015687-8398.824Octodon_degus
MGP_SPRETEiJ_G0028798Sbds10087.600ENSODEG00000019253-8487.600Octodon_degus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSONIG00000005874sbds10085.141Oreochromis_niloticus
MGP_SPRETEiJ_G0028798Sbds9691.566ENSOANG00000007674-10091.304Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSOCUG00000003170SBDS10096.400Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028798Sbds9890.476ENSORLG00000023489sbds10082.329Oryzias_latipes
MGP_SPRETEiJ_G0028798Sbds9890.476ENSORLG00020019282sbds10081.928Oryzias_latipes_hni
MGP_SPRETEiJ_G0028798Sbds9890.476ENSORLG00015008005sbds10081.928Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028798Sbds9890.476ENSOMEG00000022747sbds10082.731Oryzias_melastigma
MGP_SPRETEiJ_G0028798Sbds100100.000ENSOGAG00000009011-10098.000Otolemur_garnettii
MGP_SPRETEiJ_G0028798Sbds9688.554ENSOGAG00000015036-10081.200Otolemur_garnettii
MGP_SPRETEiJ_G0028798Sbds10097.674ENSOARG00000010609SBDS10097.600Ovis_aries
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPPAG00000043889-10096.400Pan_paniscus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPPRG00000002307SBDS10097.200Panthera_pardus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPTIG00000021308SBDS10097.200Panthera_tigris_altaica
MGP_SPRETEiJ_G0028798Sbds9897.619ENSPTRG00000047744-10082.000Pan_troglodytes
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPTRG00000019254SBDS10097.200Pan_troglodytes
MGP_SPRETEiJ_G0028798Sbds9897.619ENSPTRG00000050835-10082.400Pan_troglodytes
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPTRG00000048174-9694.931Pan_troglodytes
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPANG00000004078SBDS10096.800Papio_anubis
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPKIG00000006489sbds10086.000Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028798Sbds9689.759ENSPSIG00000014603SBDS9989.855Pelodiscus_sinensis
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPMGG00000004246sbds10083.534Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028798Sbds10098.400ENSPEMG00000008728Sbds10098.400Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028798Sbds100100.000ENSPCIG00000029718SBDS10095.600Phascolarctos_cinereus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPFOG00000015837sbds10082.731Poecilia_formosa
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPLAG00000003641sbds10082.731Poecilia_latipinna
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPMEG00000019483sbds10082.731Poecilia_mexicana
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPREG00000018758sbds10082.329Poecilia_reticulata
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPPYG00000017513SBDS10097.200Pongo_abelii
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPCOG00000021098SBDS10097.600Propithecus_coquereli
MGP_SPRETEiJ_G0028798Sbds10097.674ENSPVAG00000009369SBDS10097.200Pteropus_vampyrus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPNYG00000022403sbds10085.542Pundamilia_nyererei
MGP_SPRETEiJ_G0028798Sbds9892.857ENSPNAG00000001120sbds10086.000Pygocentrus_nattereri
MGP_SPRETEiJ_G0028798Sbds100100.000ENSRNOG00000000888Sbds10099.200Rattus_norvegicus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSRBIG00000035557SBDS10097.200Rhinopithecus_bieti
MGP_SPRETEiJ_G0028798Sbds10069.767ENSRBIG00000041549-6382.716Rhinopithecus_bieti
MGP_SPRETEiJ_G0028798Sbds10097.674ENSRROG00000040842-10097.200Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028798Sbds10088.372ENSRROG00000041986-10077.600Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028798Sbds10055.814YLR022C-9641.463Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028798Sbds9696.386ENSSBOG00000022460SBDS10096.121Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028798Sbds10097.674ENSSHAG00000010263SBDS10082.000Sarcophilus_harrisii
MGP_SPRETEiJ_G0028798Sbds9892.857ENSSFOG00015001108sbds10086.400Scleropages_formosus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSSMAG00000020506sbds10085.542Scophthalmus_maximus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSSDUG00000001528sbds10084.337Seriola_dumerili
MGP_SPRETEiJ_G0028798Sbds9892.857ENSSLDG00000003659sbds10084.739Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028798Sbds100100.000ENSSARG00000001899-73100.000Sorex_araneus
MGP_SPRETEiJ_G0028798Sbds100100.000ENSSARG00000013132-10098.693Sorex_araneus
MGP_SPRETEiJ_G0028798Sbds9888.095ENSSPUG00000002699SBDS10086.000Sphenodon_punctatus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSSPAG00000016419sbds10077.200Stegastes_partitus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSSSCG00000007732SBDS10097.200Sus_scrofa
MGP_SPRETEiJ_G0028798Sbds7288.710ENSTGUG00000003426SBDS9989.091Taeniopygia_guttata
MGP_SPRETEiJ_G0028798Sbds9892.857ENSTRUG00000021443sbds10084.739Takifugu_rubripes
MGP_SPRETEiJ_G0028798Sbds9892.857ENSTNIG00000019000sbds10083.534Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028798Sbds100100.000ENSTBEG00000001178SBDS10084.135Tupaia_belangeri
MGP_SPRETEiJ_G0028798Sbds10097.674ENSTTRG00000003921SBDS10077.600Tursiops_truncatus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSUAMG00000001326SBDS10096.800Ursus_americanus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSUMAG00000015353SBDS10096.800Ursus_maritimus
MGP_SPRETEiJ_G0028798Sbds10097.674ENSVVUG00000016478SBDS10096.400Vulpes_vulpes
MGP_SPRETEiJ_G0028798Sbds9892.857ENSXETG00000010093sbds10086.400Xenopus_tropicalis
MGP_SPRETEiJ_G0028798Sbds9892.857ENSXCOG00000010639sbds10075.502Xiphophorus_couchianus
MGP_SPRETEiJ_G0028798Sbds9892.857ENSXMAG00000006065sbds10083.133Xiphophorus_maculatus

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