EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028799 (Gene tree)
Gene ID: -
Gene Symbol: Tyw1
Alias: Rsafd1
Full Name: tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 87973 bases
Position: chr5:130165483-130253455
Accession: 2141161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0073838	Wyosine_form	PF08608.12	2.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0073840	-	771	-	MGP_SPRETEiJ_P0073840	234 (aa)	-	-
MGP_SPRETEiJ_T0073838	-	3052	-	MGP_SPRETEiJ_P0073838	721 (aa)	-	-
MGP_SPRETEiJ_T0073839	-	1855	-	MGP_SPRETEiJ_P0073839	384 (aa)	-	-
MGP_SPRETEiJ_T0073837	-	4728	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028799	Tyw1	99	80.468	ENSG00000198874	TYW1	99	80.468	Homo_sapiens
MGP_SPRETEiJ_G0028799	Tyw1	99	71.290	ENSG00000277149	TYW1B	99	71.290	Homo_sapiens
MGP_SPRETEiJ_G0028799	Tyw1	98	66.481	ENSAPOG00000014391	tyw1	100	62.958	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0028799	Tyw1	99	65.000	ENSACIG00000007325	tyw1	99	64.286	Amphilophus_citrinellus
MGP_SPRETEiJ_G0028799	Tyw1	98	66.111	ENSAOCG00000016792	tyw1	96	65.972	Amphiprion_ocellaris
MGP_SPRETEiJ_G0028799	Tyw1	98	65.972	ENSAPEG00000015939	tyw1	99	66.766	Amphiprion_percula
MGP_SPRETEiJ_G0028799	Tyw1	90	65.000	ENSATEG00000006856	tyw1	91	64.742	Anabas_testudineus
MGP_SPRETEiJ_G0028799	Tyw1	100	78.825	ENSANAG00000037051	-	100	78.825	Aotus_nancymaae
MGP_SPRETEiJ_G0028799	Tyw1	99	66.943	ENSACLG00000018688	tyw1	96	66.482	Astatotilapia_calliptera
MGP_SPRETEiJ_G0028799	Tyw1	98	67.782	ENSAMXG00000004157	tyw1	98	67.782	Astyanax_mexicanus
MGP_SPRETEiJ_G0028799	Tyw1	100	78.523	ENSBTAG00000008446	TYW1	100	78.523	Bos_taurus
MGP_SPRETEiJ_G0028799	Tyw1	100	78.689	ENSCJAG00000004295	-	100	78.689	Callithrix_jacchus
MGP_SPRETEiJ_G0028799	Tyw1	100	76.703	ENSCAFG00000010867	-	100	76.327	Canis_familiaris
MGP_SPRETEiJ_G0028799	Tyw1	99	68.611	ENSCAFG00020005367	-	99	71.079	Canis_lupus_dingo
MGP_SPRETEiJ_G0028799	Tyw1	100	79.617	ENSCHIG00000019510	-	100	79.617	Capra_hircus
MGP_SPRETEiJ_G0028799	Tyw1	90	80.243	ENSTSYG00000008236	-	100	80.243	Carlito_syrichta
MGP_SPRETEiJ_G0028799	Tyw1	88	73.742	ENSCAPG00000013569	-	100	73.742	Cavia_aperea
MGP_SPRETEiJ_G0028799	Tyw1	99	75.978	ENSCPOG00000011182	-	99	76.902	Cavia_porcellus
MGP_SPRETEiJ_G0028799	Tyw1	100	78.962	ENSCCAG00000026643	-	100	78.962	Cebus_capucinus
MGP_SPRETEiJ_G0028799	Tyw1	100	79.918	ENSCATG00000043677	-	100	79.918	Cercocebus_atys
MGP_SPRETEiJ_G0028799	Tyw1	99	78.035	ENSCLAG00000006321	-	99	78.005	Chinchilla_lanigera
MGP_SPRETEiJ_G0028799	Tyw1	99	68.923	ENSCSAG00000018274	-	99	68.923	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0028799	Tyw1	67	89.316	ENSCHOG00000003801	-	75	89.316	Choloepus_hoffmanni
MGP_SPRETEiJ_G0028799	Tyw1	99	70.355	ENSCPBG00000014896	-	96	74.954	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0028799	Tyw1	81	58.404	ENSCING00000004125	-	97	58.574	Ciona_intestinalis
MGP_SPRETEiJ_G0028799	Tyw1	55	66.910	ENSCSAVG00000005712	-	100	54.769	Ciona_savignyi
MGP_SPRETEiJ_G0028799	Tyw1	100	79.918	ENSCANG00000033209	-	100	79.918	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0028799	Tyw1	71	93.303	ENSCGRG00001003679	Tyw1	88	93.303	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0028799	Tyw1	98	66.199	ENSCSEG00000005810	tyw1	94	66.199	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0028799	Tyw1	90	64.679	ENSCVAG00000001054	tyw1	92	65.138	Cyprinodon_variegatus
MGP_SPRETEiJ_G0028799	Tyw1	98	67.922	ENSDARG00000062987	tyw1	96	67.493	Danio_rerio
MGP_SPRETEiJ_G0028799	Tyw1	99	80.055	ENSDNOG00000024165	-	99	79.642	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028799	Tyw1	99	67.082	ENSDORG00000014772	Tyw1	99	67.220	Dipodomys_ordii
MGP_SPRETEiJ_G0028799	Tyw1	51	52.846	ENSETEG00000009904	-	83	52.846	Echinops_telfairi
MGP_SPRETEiJ_G0028799	Tyw1	60	70.833	ENSEBUG00000004494	tyw1	91	70.833	Eptatretus_burgeri
MGP_SPRETEiJ_G0028799	Tyw1	100	79.315	ENSEASG00005008818	-	100	79.315	Equus_asinus_asinus
MGP_SPRETEiJ_G0028799	Tyw1	100	70.330	ENSECAG00000023164	-	100	71.016	Equus_caballus
MGP_SPRETEiJ_G0028799	Tyw1	62	89.796	ENSEEUG00000005950	-	62	89.796	Erinaceus_europaeus
MGP_SPRETEiJ_G0028799	Tyw1	99	65.400	ENSELUG00000008449	tyw1	98	65.569	Esox_lucius
MGP_SPRETEiJ_G0028799	Tyw1	100	76.703	ENSFCAG00000014262	-	100	75.782	Felis_catus
MGP_SPRETEiJ_G0028799	Tyw1	99	66.027	ENSFALG00000013810	-	100	66.027	Ficedula_albicollis
MGP_SPRETEiJ_G0028799	Tyw1	99	76.849	ENSFDAG00000013270	-	99	76.849	Fukomys_damarensis
MGP_SPRETEiJ_G0028799	Tyw1	84	66.721	ENSFHEG00000020824	tyw1	81	66.396	Fundulus_heteroclitus
MGP_SPRETEiJ_G0028799	Tyw1	99	66.847	ENSGALG00000001110	-	99	68.529	Gallus_gallus
MGP_SPRETEiJ_G0028799	Tyw1	99	65.522	ENSGACG00000012692	tyw1	99	64.626	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0028799	Tyw1	98	69.986	ENSGAGG00000022393	-	98	69.986	Gopherus_agassizii
MGP_SPRETEiJ_G0028799	Tyw1	89	71.713	ENSGGOG00000001473	TYW1	99	71.713	Gorilla_gorilla
MGP_SPRETEiJ_G0028799	Tyw1	99	66.805	ENSHBUG00000002640	tyw1	96	66.343	Haplochromis_burtoni
MGP_SPRETEiJ_G0028799	Tyw1	88	75.469	ENSHGLG00000012093	-	100	75.469	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028799	Tyw1	100	78.249	ENSHGLG00100011743	TYW1	100	78.249	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0028799	Tyw1	98	60.724	ENSHCOG00000019949	tyw1	96	60.724	Hippocampus_comes
MGP_SPRETEiJ_G0028799	Tyw1	98	65.928	ENSIPUG00000016330	tyw1	95	66.481	Ictalurus_punctatus
MGP_SPRETEiJ_G0028799	Tyw1	99	78.709	ENSSTOG00000004067	-	91	78.846	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0028799	Tyw1	99	81.768	ENSJJAG00000022959	Tyw1	99	83.149	Jaculus_jaculus
MGP_SPRETEiJ_G0028799	Tyw1	98	65.417	ENSKMAG00000018599	tyw1	96	65.833	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0028799	Tyw1	98	65.199	ENSLACG00000018917	tyw1	96	65.199	Latimeria_chalumnae
MGP_SPRETEiJ_G0028799	Tyw1	99	67.358	ENSLOCG00000004035	tyw1	95	66.990	Lepisosteus_oculatus
MGP_SPRETEiJ_G0028799	Tyw1	100	80.191	ENSMFAG00000035457	-	100	80.191	Macaca_fascicularis
MGP_SPRETEiJ_G0028799	Tyw1	100	80.191	ENSMMUG00000030374	-	100	80.191	Macaca_mulatta
MGP_SPRETEiJ_G0028799	Tyw1	100	80.328	ENSMNEG00000041992	-	100	80.328	Macaca_nemestrina
MGP_SPRETEiJ_G0028799	Tyw1	100	79.918	ENSMLEG00000039741	-	100	79.918	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0028799	Tyw1	98	67.177	ENSMAMG00000016089	tyw1	94	67.177	Mastacembelus_armatus
MGP_SPRETEiJ_G0028799	Tyw1	92	70.571	ENSMZEG00005024386	tyw1	97	70.120	Maylandia_zebra
MGP_SPRETEiJ_G0028799	Tyw1	99	68.529	ENSMGAG00000002176	-	99	68.529	Meleagris_gallopavo
MGP_SPRETEiJ_G0028799	Tyw1	99	90.707	ENSMAUG00000002959	Tyw1	99	90.707	Mesocricetus_auratus
MGP_SPRETEiJ_G0028799	Tyw1	99	80.165	ENSMICG00000014374	-	100	80.165	Microcebus_murinus
MGP_SPRETEiJ_G0028799	Tyw1	99	87.673	ENSMOCG00000017720	Tyw1	99	87.950	Microtus_ochrogaster
MGP_SPRETEiJ_G0028799	Tyw1	98	62.571	ENSMMOG00000005064	tyw1	97	62.659	Mola_mola
MGP_SPRETEiJ_G0028799	Tyw1	99	70.259	ENSMODG00000025697	-	99	70.612	Monodelphis_domestica
MGP_SPRETEiJ_G0028799	Tyw1	99	67.175	ENSMALG00000010238	tyw1	96	67.175	Monopterus_albus
MGP_SPRETEiJ_G0028799	Tyw1	100	98.474	MGP_CAROLIEiJ_G0027801	Tyw1	100	98.474	Mus_caroli
MGP_SPRETEiJ_G0028799	Tyw1	100	99.307	ENSMUSG00000056310	Tyw1	100	99.307	Mus_musculus
MGP_SPRETEiJ_G0028799	Tyw1	100	93.759	MGP_PahariEiJ_G0024383	Tyw1	100	93.759	Mus_pahari
MGP_SPRETEiJ_G0028799	Tyw1	95	76.488	ENSMPUG00000016191	-	99	75.362	Mustela_putorius_furo
MGP_SPRETEiJ_G0028799	Tyw1	99	76.027	ENSMLUG00000013582	-	99	76.027	Myotis_lucifugus
MGP_SPRETEiJ_G0028799	Tyw1	99	81.856	ENSNGAG00000002742	Tyw1	99	81.025	Nannospalax_galili
MGP_SPRETEiJ_G0028799	Tyw1	96	65.473	ENSNBRG00000016996	tyw1	99	65.473	Neolamprologus_brichardi
MGP_SPRETEiJ_G0028799	Tyw1	99	78.571	ENSNLEG00000013210	-	98	78.571	Nomascus_leucogenys
MGP_SPRETEiJ_G0028799	Tyw1	92	62.669	ENSOPRG00000008734	-	88	62.669	Ochotona_princeps
MGP_SPRETEiJ_G0028799	Tyw1	99	70.694	ENSODEG00000014729	-	99	71.250	Octodon_degus
MGP_SPRETEiJ_G0028799	Tyw1	99	67.778	ENSONIG00000005872	tyw1	96	67.316	Oreochromis_niloticus
MGP_SPRETEiJ_G0028799	Tyw1	99	78.846	ENSOCUG00000003173	-	99	78.984	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028799	Tyw1	98	66.574	ENSORLG00000001393	tyw1	98	64.714	Oryzias_latipes
MGP_SPRETEiJ_G0028799	Tyw1	98	66.713	ENSORLG00020019361	tyw1	98	65.090	Oryzias_latipes_hni
MGP_SPRETEiJ_G0028799	Tyw1	98	66.481	ENSORLG00015008095	tyw1	95	65.374	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0028799	Tyw1	94	81.871	ENSOGAG00000016555	-	99	79.310	Otolemur_garnettii
MGP_SPRETEiJ_G0028799	Tyw1	100	78.533	ENSOARG00000010673	-	100	78.533	Ovis_aries
MGP_SPRETEiJ_G0028799	Tyw1	100	77.366	ENSPPRG00000004945	-	100	76.438	Panthera_pardus
MGP_SPRETEiJ_G0028799	Tyw1	100	77.503	ENSPTIG00000019545	-	100	76.575	Panthera_tigris_altaica
MGP_SPRETEiJ_G0028799	Tyw1	99	74.555	ENSPTRG00000023076	TYW1B	98	74.555	Pan_troglodytes
MGP_SPRETEiJ_G0028799	Tyw1	100	79.781	ENSPANG00000019053	-	100	79.781	Papio_anubis
MGP_SPRETEiJ_G0028799	Tyw1	99	65.975	ENSPKIG00000006545	tyw1	96	65.975	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0028799	Tyw1	96	65.385	ENSPMGG00000004240	tyw1	99	64.356	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0028799	Tyw1	100	89.779	ENSPEMG00000008274	Tyw1	100	89.779	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0028799	Tyw1	98	67.688	ENSPFOG00000015855	tyw1	98	67.688	Poecilia_formosa
MGP_SPRETEiJ_G0028799	Tyw1	98	66.529	ENSPLAG00000000838	tyw1	95	80.366	Poecilia_latipinna
MGP_SPRETEiJ_G0028799	Tyw1	98	66.713	ENSPMEG00000019437	tyw1	100	63.916	Poecilia_mexicana
MGP_SPRETEiJ_G0028799	Tyw1	98	64.296	ENSPREG00000018773	tyw1	96	64.435	Poecilia_reticulata
MGP_SPRETEiJ_G0028799	Tyw1	100	80.191	ENSPPYG00000017514	TYW1	100	80.191	Pongo_abelii
MGP_SPRETEiJ_G0028799	Tyw1	99	64.011	ENSPCOG00000015294	-	96	71.739	Propithecus_coquereli
MGP_SPRETEiJ_G0028799	Tyw1	99	66.943	ENSPNYG00000022381	tyw1	96	66.482	Pundamilia_nyererei
MGP_SPRETEiJ_G0028799	Tyw1	98	68.106	ENSPNAG00000009001	tyw1	98	67.967	Pygocentrus_nattereri
MGP_SPRETEiJ_G0028799	Tyw1	99	93.481	ENSRNOG00000024352	Tyw1	99	93.481	Rattus_norvegicus
MGP_SPRETEiJ_G0028799	Tyw1	100	79.781	ENSRBIG00000039619	-	100	79.781	Rhinopithecus_bieti
MGP_SPRETEiJ_G0028799	Tyw1	99	80.220	ENSRROG00000039780	-	99	80.220	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0028799	Tyw1	94	40.607	YPL207W	-	66	56.183	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0028799	Tyw1	100	78.279	ENSSBOG00000025873	-	100	78.279	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0028799	Tyw1	99	70.628	ENSSHAG00000010346	-	100	71.745	Sarcophilus_harrisii
MGP_SPRETEiJ_G0028799	Tyw1	98	68.531	ENSSFOG00015001054	tyw1	99	67.841	Scleropages_formosus
MGP_SPRETEiJ_G0028799	Tyw1	99	65.603	ENSSMAG00000020514	tyw1	96	65.603	Scophthalmus_maximus
MGP_SPRETEiJ_G0028799	Tyw1	99	66.252	ENSSDUG00000001552	tyw1	94	69.715	Seriola_dumerili
MGP_SPRETEiJ_G0028799	Tyw1	99	66.390	ENSSLDG00000003554	tyw1	96	66.025	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0028799	Tyw1	99	67.808	ENSSPUG00000002715	-	99	68.630	Sphenodon_punctatus
MGP_SPRETEiJ_G0028799	Tyw1	100	78.356	ENSSSCG00000007733	-	100	78.356	Sus_scrofa
MGP_SPRETEiJ_G0028799	Tyw1	90	66.868	ENSTGUG00000003428	-	99	66.868	Taeniopygia_guttata
MGP_SPRETEiJ_G0028799	Tyw1	98	65.833	ENSTRUG00000016107	tyw1	93	65.556	Takifugu_rubripes
MGP_SPRETEiJ_G0028799	Tyw1	91	71.064	ENSTNIG00000018999	tyw1	100	70.915	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0028799	Tyw1	100	77.112	ENSUMAG00000015343	-	100	76.190	Ursus_maritimus
MGP_SPRETEiJ_G0028799	Tyw1	99	76.575	ENSVVUG00000016457	-	99	76.197	Vulpes_vulpes
MGP_SPRETEiJ_G0028799	Tyw1	99	68.126	ENSXETG00000010094	tyw1	99	68.126	Xenopus_tropicalis
MGP_SPRETEiJ_G0028799	Tyw1	98	67.177	ENSXMAG00000013125	tyw1	99	66.465	Xiphophorus_maculatus